CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 5
cytosol 1
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY59546	Canola	plastid	98.83	97.02
Bra039607.1-P	Field mustard	nucleus	100.0	70.16
CDY65603	Canola	plastid	99.53	68.93
AT2G18470.3	Thale cress	plastid	87.62	59.24
PGSC0003DMT400038554	Potato	nucleus, plastid	46.96	40.69
VIT_04s0023g01570.t01	Wine grape	nucleus	42.29	40.04
CDY66134	Canola	nucleus	85.98	40.0
CDY51224	Canola	plastid	88.32	39.96
CDX92276	Canola	plasma membrane	42.52	37.92
GSMUA_Achr5P02090_001	Banana	nucleus	51.4	37.41
Zm00001d030218_P003	Maize	plastid	47.43	36.45
CDX75275	Canola	cytosol	29.67	36.08
KRH28656	Soybean	nucleus, plastid	53.04	35.92
GSMUA_Achr4P32080_001	Banana	plastid	51.64	35.88
KRH76796	Soybean	nucleus, plastid	53.04	35.8
Os10t0104800-01	Rice	plastid	47.43	35.74
EER91832	Sorghum	plastid	46.5	35.73
GSMUA_Achr7P26790_001	Banana	plastid	36.22	35.55
GSMUA_Achr7P00830_001	Banana	plastid	50.47	35.18
HORVU0Hr1G013830.4	Barley	plastid	46.5	35.16
Zm00001d028337_P003	Maize	nucleus	47.43	34.82
TraesCS5A01G411300.1	Wheat	plastid	46.5	34.73
KXG39820	Sorghum	plastid	46.03	34.44
TraesCS4B01G233600.1	Wheat	nucleus, plastid	49.07	33.98
TraesCS4A01G077500.1	Wheat	nucleus	49.07	33.82
CDY48859	Canola	nucleus, plastid	53.04	33.14
PGSC0003DMT400040010	Potato	nucleus, plastid	49.53	32.97
GSMUA_Achr4P10790_001	Banana	plastid	49.07	32.97
Solyc02g085430.2.1	Tomato	nucleus, plastid	46.96	32.95
CDY48084	Canola	nucleus, plastid	52.8	32.94
CDX95494	Canola	nucleus, plastid	52.8	32.94
Zm00001d034257_P002	Maize	plastid	45.09	32.94
EER90803	Sorghum	plastid	46.26	32.84
CDY18547	Canola	nucleus, plastid	52.34	32.7
GSMUA_Achr4P03200_001	Banana	mitochondrion, plasma membrane	51.87	32.7
CDY46249	Canola	nucleus, plastid	50.7	32.68
CDY39543	Canola	plastid	49.53	32.67
HORVU2Hr1G061030.8	Barley	plastid	40.65	32.65
CDX76282	Canola	nucleus, plastid	50.23	32.53
CDX77417	Canola	plastid	49.3	32.46
EER97954	Sorghum	plastid	43.22	32.34
CDY61983	Canola	cytosol, plastid	52.57	32.28
Solyc02g062790.2.1	Tomato	nucleus	49.3	32.26
Os07t0137800-00	Rice	plasma membrane	40.42	32.16
CDX75434	Canola	nucleus, plastid	50.47	32.14
CDX99312	Canola	nucleus, plastid	48.36	31.6
TraesCS5B01G415000.1	Wheat	plastid	45.09	31.48
CDX82325	Canola	cytosol, plastid	52.34	31.42
KRH08293	Soybean	nucleus	43.93	31.39
KRH69932	Soybean	plastid	44.39	31.25
Zm00001d007848_P001	Maize	mitochondrion, plastid	43.22	30.43
CDY02546	Canola	plastid	35.75	29.82
CDX69059	Canola	endoplasmic reticulum, plasma membrane	49.53	29.69
PGSC0003DMT400045839	Potato	cytosol, plastid	50.47	29.67
CDY47531	Canola	plastid	35.75	29.59
Solyc03g034060.2.1	Tomato	cytosol, plastid	50.47	29.03
CDX74517	Canola	plastid	39.72	25.6
CDY01653	Canola	plastid	39.02	25.42
CDX91719	Canola	plastid	39.72	25.22
CDY41442	Canola	plastid	38.55	25.04
CDY03749	Canola	plastid	39.25	25.0
CDY09439	Canola	plastid	39.72	24.89
CDY48706	Canola	cytosol	30.37	24.62
CDY44156	Canola	nucleus	40.42	24.3
CDX68882	Canola	plastid	39.49	24.04
CDX93398	Canola	cytosol	38.78	23.22
CDY04245	Canola	plastid	36.45	22.98
CDY20960	Canola	cytosol	39.02	22.94
CDY51639	Canola	nucleus	37.62	22.93
CDY37963	Canola	cytosol	38.55	22.88
CDY11592	Canola	plastid	39.25	22.86
CDY07370	Canola	plastid	35.51	22.82
CDY59350	Canola	plastid	35.05	22.62
CDY20615	Canola	cytosol	38.08	22.42
CDY47133	Canola	cytosol, plastid	39.25	22.34
CDX95997	Canola	plastid	35.51	20.71
CDY46900	Canola	plasma membrane	33.41	19.35
CDY16146	Canola	plastid	37.38	19.12
CDY38610	Canola	plastid	36.45	17.71
CDX75728	Canola	cytosol	24.77	17.67
CDY10586	Canola	cytosol, nucleus, plasma membrane	24.3	17.22
CDY02454	Canola	cytosol, nucleus, plasma membrane	24.07	17.05
CDY48704	Canola	cytosol, mitochondrion, plasma membrane, plastid	15.42	17.01
CDY32884	Canola	plasma membrane	24.53	16.99
CDX82522	Canola	cytosol	25.0	16.29
CDY20711	Canola	cytosol, plasma membrane, plastid	24.53	15.86
CDY32758	Canola	plasma membrane	24.53	15.79
CDY23630	Canola	cytosol	26.64	15.38
CDX97507	Canola	cytosol, mitochondrion, nucleus	26.64	15.26
CDY51732	Canola	cytosol	26.4	15.03
CDY55134	Canola	cytosol	26.4	15.03
HORVU4Hr1G065270.7	Barley	cytosol	15.89	13.82
CDY32921	Canola	plasma membrane	20.56	11.73
CDY32757	Canola	plasma membrane	14.49	8.74

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	MapMan:50.2.7	GO:A0A078K039	UniProt:A0A078K039	EnsemblPlants:CDY71995
ProteinID:CDY71995	ProteinID:CDY71995.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00022975001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF07714
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF285	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix
UniParc:UPI0004EEB74F	SEG:seg	:	:	:	:

Description

BnaA07g36140DBnaA07g36140D protein [Source:UniProtKB/TrEMBL;Acc:A0A078K039]

Coordinates

chrLK048453:-:71..1704

Molecular Weight (calculated)

44496.5 Da

IEP (calculated)

9.163

GRAVY (calculated)

-0.619

Length

428 amino acids

Sequence
(BLAST)

001: MASSPESSPP PSNSSSTSST PPSPPSPTQG DSSSPPPDSS SPPAPQAPSP PSSSNNSPPS PASQGGGGNG GGNQSPPSRG SPPSRGGDNS GSRSSQSGNN
101: GGSRSDNSPS GGSGGGGGGG GNNTNTAIII GVLVGAGLLM IVLIIVCLRR KKKRKDSFYP ESMKGNQYQY YGNNNNNNNN NSSQNYPNWH LNSQGQNQQP
201: PNSWGGGGPS LPPPQQMPTS GDASSLYSGP ARPVLPPPPP TLALGFNKST FTYQELAAAT GGFADSNLLG QGGFGYVHKG VLSSGKEVAV KSLKSGSGQG
301: EREFQAEVDI ISRVHHRYLV SLVGYCIADA QRMLVYEFVP NNTLEYHLHG KNLPVMDFST RMRIALGAGK GLAYLHEDCH PRIIHRDIKS ANILLDFNFD
401: AMVADFGLAK LTSDNYTHVS TRVMGTFG

Best Arabidopsis Sequence Match ( AT2G18470.4 )
(BLAST)

001: MASSPESAPP TNSTSSPSPP SNTNSTTSSP PAPSPPSPTP PQGDSSSSPP PDSTSPPAPQ APNPPNSSNN SPSPPSQGGG GERGNGGNNG GNDTPPSRGS
101: PPSPPSRSNG DNGGSRSSPP GDTGGSRSDN PPSSGGSSGG GGGGRSNTNT AIIVGVLVGA GLLMIVLIIV CLRRKKKRKD SFYPEPMKGN QYQYYGNNNN
201: NNASQNYPNW HLNSQGQNQQ STGGWGGGGP SPPPPPRMPT SGEDSSMYSG PSRPVLPPPS PALALGFNKS TFTYQELAAA TGGFTDANLL GQGGFGYVHK
301: GVLPSGKEVA VKSLKAGSGQ GEREFQAEVD IISRVHHRYL VSLVGYCIAD GQRMLVYEFV PNKTLEYHLH GKNLPVMEFS TRLRIALGAA KGLAYLHEDC
401: HPRIIHRDIK SANILLDFNF DAMVADFGLA KLTSDNNTHV STRVMGTFGY LAPEYASSGK LTEKSDVFSY GVMLLELITG KRPVDNSITM DDTLVDWVFM
501: HVTYVSCIYV FRLFRVLMIM NTGSASYGSR ARRWKL

Arabidopsis Description

PERK4Proline-rich receptor-like protein kinase PERK4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZNQ8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.