Factsheet for Solyc02g085430.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 4
plastid 3
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400038554	Potato	nucleus, plastid	75.74	93.52
Solyc02g089750.2.1	Tomato	cytosol	20.49	71.43
VIT_04s0023g01570.t01	Wine grape	nucleus	43.11	58.19
GSMUA_Achr7P26790_001	Banana	plastid	40.33	56.42
Solyc02g062790.2.1	Tomato	nucleus	59.18	55.2
Solyc03g034060.2.1	Tomato	cytosol, plastid	61.97	50.81
Zm00001d030218_P003	Maize	plastid	45.25	49.55
EER91832	Sorghum	plastid	44.92	49.19
GSMUA_Achr5P02090_001	Banana	nucleus	47.38	49.15
KXG39820	Sorghum	plastid	45.57	48.6
Zm00001d028337_P003	Maize	nucleus	46.39	48.54
CDY65603	Canola	plastid	48.69	48.06
KRH76796	Soybean	nucleus, plastid	49.84	47.95
Bra039607.1-P	Field mustard	nucleus	47.87	47.87
AT2G18470.3	Thale cress	plastid	49.67	47.87
Solyc08g068250.2.1	Tomato	cytosol	32.95	47.63
HORVU0Hr1G013830.4	Barley	plastid	43.93	47.35
CDY59546	Canola	plastid	33.77	47.25
GSMUA_Achr7P00830_001	Banana	plastid	47.54	47.23
CDY71995	Canola	nucleus, plastid	32.95	46.96
KRH28656	Soybean	nucleus, plastid	48.52	46.84
KRH08293	Soybean	nucleus	45.74	46.58
KRH69932	Soybean	plastid	46.39	46.55
Solyc12g007110.1.1	Tomato	nucleus	51.97	46.28
Os10t0104800-01	Rice	plastid	42.95	46.13
GSMUA_Achr4P10790_001	Banana	plastid	48.03	46.0
GSMUA_Achr4P32080_001	Banana	plastid	46.39	45.94
TraesCS4A01G077500.1	Wheat	nucleus	46.56	45.73
TraesCS4B01G233600.1	Wheat	nucleus, plastid	46.23	45.63
TraesCS5A01G411300.1	Wheat	plastid	42.79	45.55
HORVU2Hr1G061030.8	Barley	plastid	39.67	45.4
Zm00001d034257_P002	Maize	plastid	42.79	44.54
Solyc03g120760.2.1	Tomato	plasma membrane, plastid	41.97	44.06
EER97954	Sorghum	plastid	41.31	44.06
EER90803	Sorghum	plastid	43.44	43.95
GSMUA_Achr4P03200_001	Banana	mitochondrion, plasma membrane	47.87	43.0
Os07t0137800-00	Rice	plasma membrane	37.54	42.57
TraesCS5B01G415000.1	Wheat	plastid	42.62	42.41
Zm00001d007848_P001	Maize	mitochondrion, plastid	41.64	41.78
Solyc10g051330.1.1	Tomato	nucleus	40.33	41.0
Solyc11g044460.1.1	Tomato	nucleus	47.21	39.34
Solyc01g109530.2.1	Tomato	nucleus	44.43	38.83
Solyc05g010140.2.1	Tomato	plastid	42.95	34.93
Solyc01g010030.2.1	Tomato	plastid	41.64	34.79
Bra037220.1-P	Field mustard	nucleus	47.87	31.88
CDY66134	Canola	nucleus	47.7	31.63
Solyc04g006930.2.1	Tomato	plastid	41.31	31.5
CDY51224	Canola	plastid	47.7	30.76
HORVU4Hr1G065270.7	Barley	cytosol	24.75	30.69
Solyc07g027020.2.1	Tomato	cytosol, mitochondrion, plasma membrane, plastid	25.41	23.92
Solyc03g121440.2.1	Tomato	cytosol	26.72	22.3
Solyc12g044840.1.1	Tomato	cytosol	27.05	22.27
Solyc04g063370.1.1	Tomato	cytosol	21.48	21.62
Solyc01g096690.1.1	Tomato	cytosol, nucleus, plasma membrane	22.46	20.73
Solyc04g079690.2.1	Tomato	plasma membrane	22.79	19.36

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.22	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
GO:GO:0038023	InterPro:IPR000719	UniProt:K4BB55	InterPro:Kinase-like_dom_sf	PFAM:PF07714	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF192	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc02g085430.2	EnsemblPlants:Solyc02g085430.2.1
TMHMM:TMhelix	UniParc:UPI0002769223	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2:-:48333515..48337358

Molecular Weight (calculated)

65176.2 Da

IEP (calculated)

7.138

GRAVY (calculated)

-0.551

Length

610 amino acids

Sequence
(BLAST)

001: MQSPPSTASS DKDETTSSSP SNSSPSPPPP APPTSPPPES PPPVNSPPPS KESSPPSSPP PSASESPPPP SDSTTTSLNA PEASPPTSSK FNPPPPVSSG
101: SPSLSAGKLS PPPPSEKSAP FEKPDGAQHS GKPAAGSSGN NNGSPSSNSG SSDMFVVTGI AVAGLMIFAT IIVCLIYWRR KKKEHYYTNP PPGPSRRPPK
201: GAGSTDPYYK GPKPMEHIIK VPTTVYTSND STFAVNGQAL VPSPSLGGFS KSQFTYEELA RATSGFSKAN LLGQGGFGYV HKGVLVDGTV VAVKSLKSGS
301: GQGEREFQAE VDIISRVHHR HLVSLVGYCI ADRQRMLVYE YVPNKTLEFH LHGKGHRVMD WGTRLKIALG SAKGLAYLHE DCHPKIIHRD IKAANILLED
401: NFEAKVADFG LAKLSSDNLT HVSTRVMGTF GYMAPEYASS GKLTDRSDVF SFGIVLLELI TGKRPIDPSN IMEDSLVEWA RPLLKTALEE GKYDELVGAP
501: FEGNNVPKEL HRLVVCAAAS TRYSAKRRPK MTQIMRALDG DSSLEDMSDG AKTDTYDTSA YNADMIKFRE MISNQEFNSS EYGGTSDYGL NPSSSSGDSS
601: ELDHHQRSRG

Best Arabidopsis Sequence Match ( AT2G18470.1 )
(BLAST)

001: MASSPESAPP TNSTSSPSPP SNTNSTTSSP PAPSPPSPTP PQGDSSSSPP PDSTSPPAPQ APNPPNSSNN SPSPPSQGGG GERGNGGNNG GNDTPPSRGS
101: PPSPPSRSNG DNGGSRSSPP GDTGGSRSDN PPSSGGSSGG GGGGRSNTNT AIIVGVLVGA GLLMIVLIIV CLRRKKKRKD SFYPEPMKGN QYQYYGNNNN
201: NNASQNYPNW HLNSQGQNQQ STGGWGGGGP SPPPPPRMPT SGEDSSMYSG PSRPVLPPPS PALALGFNKS TFTYQELAAA TGGFTDANLL GQGGFGYVHK
301: GVLPSGKEVA VKSLKAGSGQ GEREFQAEVD IISRVHHRYL VSLVGYCIAD GQRMLVYEFV PNKTLEYHLH GKNLPVMEFS TRLRIALGAA KGLAYLHEDC
401: HPRIIHRDIK SANILLDFNF DAMVADFGLA KLTSDNNTHV STRVMGTFGY LAPEYASSGK LTEKSDVFSY GVMLLELITG KRPVDNSITM DDTLVDWARP
501: LMARALEDGN FNELADARLE GNYNPQEMAR MVTCAAASIR HSGRKRPKMS QIVRALEGEV SLDALNEGVK PGHSNVYGSL GASSDYSQTS YNADMKKFRQ
601: IALSSQEFPV SDCEGTSSND SRDMGTKSPT PPK

Arabidopsis Description

PERK4Proline-rich receptor-like protein kinase PERK4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZNQ8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.