Factsheet for PGSC0003DMT400038554

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 4
plasma membrane 1
mitochondrion 1
cytosol 1
nucleus 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g085430.2.1	Tomato	nucleus, plastid	93.52	75.74
CDY59546	Canola	plastid	41.7	47.25
CDY71995	Canola	nucleus, plastid	40.69	46.96
PGSC0003DMT400040010	Potato	nucleus, plastid	60.93	46.81
VIT_04s0023g01570.t01	Wine grape	nucleus	41.5	45.35
GSMUA_Achr7P26790_001	Banana	plastid	39.68	44.95
Zm00001d030218_P003	Maize	plastid	46.76	41.47
KXG39820	Sorghum	plastid	47.98	41.43
EER91832	Sorghum	plastid	46.15	40.93
Zm00001d028337_P003	Maize	nucleus	48.18	40.82
GSMUA_Achr5P02090_001	Banana	nucleus	48.58	40.82
PGSC0003DMT400045839	Potato	cytosol, plastid	59.92	40.66
Os10t0104800-01	Rice	plastid	45.95	39.96
AT2G18470.3	Thale cress	plastid	51.01	39.81
CDY65603	Canola	plastid	49.6	39.64
HORVU0Hr1G013830.4	Barley	plastid	45.34	39.58
Bra039607.1-P	Field mustard	nucleus	48.58	39.34
KRH76796	Soybean	nucleus, plastid	50.4	39.27
GSMUA_Achr7P00830_001	Banana	plastid	48.79	39.25
TraesCS4A01G077500.1	Wheat	nucleus	48.99	38.97
TraesCS4B01G233600.1	Wheat	nucleus, plastid	48.38	38.67
GSMUA_Achr4P32080_001	Banana	plastid	48.18	38.64
Zm00001d034257_P002	Maize	plastid	45.55	38.4
KRH28656	Soybean	nucleus, plastid	48.99	38.29
TraesCS5A01G411300.1	Wheat	plastid	44.33	38.22
KRH69932	Soybean	plastid	46.56	37.83
HORVU2Hr1G061030.8	Barley	plastid	40.49	37.52
PGSC0003DMT400001024	Potato	plastid	52.83	37.45
KRH08293	Soybean	nucleus	45.34	37.4
GSMUA_Achr4P10790_001	Banana	plastid	48.18	37.36
EER90803	Sorghum	plastid	45.55	37.31
PGSC0003DMT400006515	Potato	plastid	43.52	36.56
EER97954	Sorghum	plastid	41.5	35.84
Os07t0137800-00	Rice	plasma membrane	38.87	35.69
PGSC0003DMT400037638	Potato	plastid	41.7	35.52
TraesCS5B01G415000.1	Wheat	plastid	43.93	35.4
GSMUA_Achr4P03200_001	Banana	mitochondrion, plasma membrane	47.77	34.76
Zm00001d007848_P001	Maize	mitochondrion, plastid	41.5	33.72
PGSC0003DMT400001868	Potato	nucleus, plastid	46.15	33.43
PGSC0003DMT400062758	Potato	nucleus	48.38	33.38
PGSC0003DMT400026193	Potato	plastid	45.34	32.84
PGSC0003DMT400019290	Potato	mitochondrion	44.33	31.47
PGSC0003DMT400064597	Potato	plastid	45.14	29.93
PGSC0003DMT400041343	Potato	plastid	43.72	29.23
Bra037220.1-P	Field mustard	nucleus	48.79	26.31
CDY66134	Canola	nucleus	48.58	26.09
CDY51224	Canola	plastid	48.79	25.48
PGSC0003DMT400083900	Potato	cytosol, nucleus, peroxisome	26.32	22.26
HORVU4Hr1G065270.7	Barley	cytosol	22.06	22.15
PGSC0003DMT400024762	Potato	cytosol, plasma membrane, plastid	28.54	21.11
PGSC0003DMT400006664	Potato	cytosol	29.15	19.54
PGSC0003DMT400008513	Potato	cytosol, plasma membrane, plastid	25.1	19.34
PGSC0003DMT400008632	Potato	mitochondrion	25.3	17.46

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.22	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
UniProt:M1B727	PFAM:PF07714	EnsemblPlantsGene:PGSC0003DMG400014892	PGSC:PGSC0003DMG400014892	EnsemblPlants:PGSC0003DMT400038554	PIRSF:PIRSF000615
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF192	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix
UniParc:UPI00029553ED	SEG:seg	:	:	:	:

Description

PERK1 kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400014892]

Coordinates

chr2:+:40623603..40627543

Molecular Weight (calculated)

52521.8 Da

IEP (calculated)

9.246

GRAVY (calculated)

-0.485

Length

494 amino acids

Sequence
(BLAST)

001: MQSPPGTASS DKNDTTSSSP SNSSPSPPPP APPTSPPPES PPPAKESSPP SSPPPSASES PPPPSEYTTT SPNAPDEASP PTSSKFNPPP PVSSGPPSLS
101: AGKLSPPPPS EKSAPFEKPG GAQRSGKPAA GSSGNNNGSP SSNSGSSDMF IVAGIAVAGL MIFATIIVCL IYWRRKKKEH YYTNGPPGTP GPPRRPPKGA
201: GSTDPYYKGP KPTEHIVKVP TIVYTSSDST FAVNGQALVP SPSLGGFSKS QFTYEELARA TSGFSKANLL GQGGFGYVHK GVLVDGTVVA VKSLKSGSGQ
301: GEREFQAEVD IISRVHHRHL VSLVGYCIAD SQRMLVYEYV PNKTLEFHLH GKGHRVMDWG TRLKIALGSA RGLAYLHEDC HPKIIHRDIK AANILLEDNF
401: EAKVADFGLA KLSSDNFTHV STRVMGTFGY MAPEYASSGK LTDRSDVFSF GIVLLELITG KRPIDPSNIM EDSLVDWARP LLKTPWKREN MTNW

Best Arabidopsis Sequence Match ( AT1G49270.1 )
(BLAST)

001: MAEGQSPENS PPAPPPPSPP SPPSSNDQQT TSPPPSDNQE TTSPPPPSSP DIAPPPQQQQ ESPPPPLPEN SSDGSSSSSP PPPSDSSSQS QSPPPPSTSP
101: PQQSDNNGNK GNNNENNKGN DGSSGDGGNK NMSHTPPPPS KTSDHSSHSQ PRSLAPPTSN SGSNSSSNDG LNIGAVIGLV AAAGILFIVM ILLCVCCFRK
201: KKKKSKLDQM PYYGSNAYPA GKTGGDQYYN QNAATQQQQH YNQNDHIVNL PPPPGSMGTN WVSSPPPPPP GNWQPMPSPP APVSGGANVI QSGEMSSNFS
301: SGPYAPSLPP PHPSVALGFN NSTFTYEELA SATQGFSKDR LLGQGGFGYV HKGILPNGKE IAVKSLKAGS GQGEREFQAE VEIISRVHHR HLVSLVGYCS
401: NAGGQRLLVY EFLPNDTLEF HLHGKSGTVM DWPTRLKIAL GSAKGLAYLH EDCHPKIIHR DIKASNILLD HNFEAKVADF GLAKLSQDNN THVSTRVMGT
501: FGYLAPEYAS SGKLTEKSDV FSFGVMLLEL ITGRGPVDLS GDMEDSLVDW ARPLCMRVAQ DGEYGELVDP FLEHQYEPYE MARMVACAAA AVRHSGRRRP
601: KMSQIVRTLE GDASLDDLDD GVKPKQSSSG GEGSSDYEMG TYGAEMRKFR KVTLESRDYG ASSEYGATSE YGLDPSSSSS EEMHIGGSTS KTTTTNRGI

Arabidopsis Description

PERK7Proline-rich receptor-like protein kinase PERK7 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI96]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.