Factsheet for PGSC0003DMT400026193

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 2
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400037344
PGSC0003DMT400057390

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G38560.1	PGSC0003DMT400037344	AT4G26630.1	25387881
AT5G38560.1	PGSC0003DMT400057390	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g089750.2.1	Tomato	cytosol	24.19	94.29
VIT_14s0083g00330.t01	Wine grape	plasma membrane	48.53	75.92
Os05t0100700-02	Rice	plasma membrane	28.15	73.0
GSMUA_Achr8P29720_001	Banana	mitochondrion	39.44	67.42
TraesCS1B01G001500.1	Wheat	plastid	34.31	65.18
TraesCS3D01G005400.1	Wheat	cytosol	37.54	63.84
Bra028192.1-P	Field mustard	plastid	56.16	57.25
CDY01653	Canola	plastid	55.13	57.23
CDX74517	Canola	plastid	55.72	57.23
AT5G38560.1	Thale cress	plastid	56.89	56.98
GSMUA_Achr2P09600_001	Banana	plastid	54.84	56.93
KRH45181	Soybean	plastid	59.82	56.35
GSMUA_Achr1P25240_001	Banana	mitochondrion	39.0	55.53
KRH01485	Soybean	plastid	61.44	55.42
GSMUA_Achr2P14510_001	Banana	plastid	52.64	54.64
GSMUA_Achr4P24400_001	Banana	plastid	51.17	52.8
Zm00001d035774_P001	Maize	plastid	45.6	52.27
TraesCS3A01G278100.1	Wheat	plastid	50.88	51.41
TraesCS3B01G312300.1	Wheat	plastid	50.73	51.11
HORVU3Hr1G070200.1	Barley	plastid	50.44	50.96
TraesCS3D01G278400.1	Wheat	cytosol, plastid	50.44	50.89
Zm00001d040127_P001	Maize	plasma membrane	51.47	50.8
KXG32101	Sorghum	plastid	52.05	50.79
GSMUA_Achr10P...	Banana	plastid	53.37	50.77
PGSC0003DMT400019290	Potato	mitochondrion	51.47	50.43
KXG20993	Sorghum	plastid	44.72	50.33
Os01t0110500-01	Rice	plasma membrane	51.32	50.14
EES01447	Sorghum	plastid	49.56	50.07
TraesCS3B01G008600.2	Wheat	plastid	50.15	49.85
Zm00001d012774_P001	Maize	cytosol, plastid	48.83	49.85
PGSC0003DMT400041343	Potato	plastid	53.96	49.8
Os01t0738300-01	Rice	cytosol	48.97	49.78
HORVU3Hr1G000770.2	Barley	plastid	49.85	49.63
TraesCS3A01G003900.1	Wheat	plastid	49.85	49.49
PGSC0003DMT400064597	Potato	plastid	53.81	49.26
Zm00001d043562_P008	Maize	cytosol	49.27	49.05
TraesCS1D01G004300.1	Wheat	plastid	46.48	48.32
Zm00001d008433_P007	Maize	plastid	51.47	48.08
HORVU1Hr1G000090.3	Barley	plastid	46.04	47.58
PGSC0003DMT400038554	Potato	nucleus, plastid	32.84	45.34
PGSC0003DMT400001024	Potato	plastid	43.84	42.9
PGSC0003DMT400040010	Potato	nucleus, plastid	40.32	42.77
PGSC0003DMT400006515	Potato	plastid	36.51	42.35
PGSC0003DMT400037638	Potato	plastid	35.92	42.24
PGSC0003DMT400045839	Potato	cytosol, plastid	40.76	38.19
PGSC0003DMT400001868	Potato	nucleus, plastid	37.83	37.83
PGSC0003DMT400062758	Potato	nucleus	39.15	37.29
GSMUA_Achr8P13750_001	Banana	cytosol, nucleus, plastid	46.63	36.26
PGSC0003DMT400083900	Potato	cytosol, nucleus, peroxisome	25.95	30.31
PGSC0003DMT400006664	Potato	cytosol	28.59	26.46
PGSC0003DMT400024762	Potato	cytosol, plasma membrane, plastid	25.81	26.35
PGSC0003DMT400008513	Potato	cytosol, plasma membrane, plastid	22.14	23.56
PGSC0003DMT400008632	Potato	mitochondrion	23.31	22.21

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102585184	MapMan:18.4.1.22	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	UniProt:M1AMU0	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400010093	PGSC:PGSC0003DMG400010093	EnsemblPlants:PGSC0003DMT400026193
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF132	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI000294B714
RefSeq:XP_006338285.1	SEG:seg	:	:	:	:

Description

ATP binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400010093]

Coordinates

chr2:-:44947401..44953393

Molecular Weight (calculated)

71880.2 Da

IEP (calculated)

6.655

GRAVY (calculated)

-0.512

Length

682 amino acids

Sequence
(BLAST)

001: MASPDSPPSF FPFPTFPTAT PSNSTSDSPP APPPDSSSPP PPPPDSSAPP PSPPAPDSPP PSESKSPPPA ESPPPPPPTA AAPPPSAPPP KPSVSPPPPS
101: PKAPPPANSP PPASSPPPPS KDSPPPAPPP SPPPPPPAVS PSPPPPVKNQ PPPPDSPPPA PVANPPQNSP PPPALAPPPA SLPSAPPPNL LTSPPPSISP
201: PAPPNNTSPA GAPPPLPVTR LPTEKPTAIP KPAITADSSA RNGGGNKTGS VAAIGVVAGF LALSLVIVAV WFTRRRKKRE SAFNLNYLGP SPFASSPNSD
301: TSFLRSRSQH STYLAPTGSQ SNFMYSPDHG GIGNSRSWFT YEELSEATNG FSPDSVLGEG GFGCVYKGVL NDGREVAVKQ LKSGSGQGER EFRAEVEIIS
401: RVHHRHLVSL VGYCISEQQR LLVYDYVPND TLDYHLHGKG MQTMDWATRV KVAAGAARGL AYLHEDCHPR IIHRDIKTSN ILLDINFEAQ VADFGLARLA
501: GDASSTHVTT RVMGTFGYLA PEYASSGKLT EKSDVYSYGV VLLELITGRK PVDQSQPLGD ESLVEWARPL LAQALETENF ENVVDPRLGN NFVAGEMFRM
601: IEAAAACVRH SGSKRPRMSQ VVRALDSMDE LSDLSNGVKP GQSGIFESRE QSAQIRMFQK MAFGSQEYSS DFFNYSQGSY KS

Best Arabidopsis Sequence Match ( AT1G26150.1 )
(BLAST)

001: MTTPAQAPRE EVSLSPSLAS PPLMALPPPQ PSFPGDNATS PTREPTNGNP PETTNTPAQS SPPPETPLSS PPPEPSPPSP SLTGPPPTTI PVSPPPEPSP
101: PPPLPTEAPP PANPVSSPPP ESSPPPPPPT EAPPTTPITS PSPPTNPPPP PESPPSLPAP DPPSNPLPPP KLVPPSHSPP RHLPSPPASE IPPPPRHLPS
201: PPASERPSTP PSDSEHPSPP PPGHPKRREQ PPPPGSKRPT PSPPSPSDSK RPVHPSPPSP PEETLPPPKP SPDPLPSNSS SPPTLLPPSS VVSPPSPPRK
301: SVSGPDNPSP NNPTPVTDNS SSSGISIAAV VGVSIGVALV LLTLIGVVVC CLKKRKKRLS TIGGGYVMPT PMESSSPRSD SALLKTQSSA PLVGNRSSNR
401: TYLSQSEPGG FGQSRELFSY EELVIATNGF SDENLLGEGG FGRVYKGVLP DERVVAVKQL KIGGGQGDRE FKAEVDTISR VHHRNLLSMV GYCISENRRL
501: LIYDYVPNNN LYFHLHAAGT PGLDWATRVK IAAGAARGLA YLHEDCHPRI IHRDIKSSNI LLENNFHALV SDFGLAKLAL DCNTHITTRV MGTFGYMAPE
601: YASSGKLTEK SDVFSFGVVL LELITGRKPV DASQPLGDES LVEWARPLLS NATETEEFTA LADPKLGRNY VGVEMFRMIE AAAACIRHSA TKRPRMSQIV
701: RAFDSLAEED LTNGMRLGES EIINSAQQSA EIRLFRRMAF GSQNYSTDSL TRNSYISKDE NL

Arabidopsis Description

PERK10Proline-rich receptor-like protein kinase PERK10 [Source:UniProtKB/Swiss-Prot;Acc:Q9C660]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.