Factsheet for GSMUA_Achr10P20290_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
cytosol 2
plastid 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr9P09250_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G38560.1	GSMUA_Achr9P09250_001	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g089750.2.1	Tomato	cytosol	18.83	77.14
Os05t0100700-02	Rice	plasma membrane	27.34	74.52
GSMUA_Achr2P09600_001	Banana	plastid	67.64	73.82
GSMUA_Achr2P14510_001	Banana	plastid	62.48	68.19
VIT_14s0083g00330.t01	Wine grape	plasma membrane	41.0	67.43
TraesCS3D01G005400.1	Wheat	cytosol	36.82	65.84
TraesCS1B01G001500.1	Wheat	plastid	32.36	64.62
GSMUA_Achr8P29720_001	Banana	mitochondrion	35.84	64.41
Bra004022.1-P	Field mustard	plastid	34.31	63.24
GSMUA_Achr4P24400_001	Banana	plastid	57.32	62.18
KRH07595	Soybean	plastid	41.56	56.02
Zm00001d040127_P001	Maize	plasma membrane	53.84	55.86
KXG32101	Sorghum	plastid	53.97	55.36
GSMUA_Achr1P25240_001	Banana	mitochondrion	36.96	55.32
VIT_01s0011g02460.t01	Wine grape	plastid	54.25	53.58
Zm00001d035774_P001	Maize	plastid	44.35	53.45
Os01t0110500-01	Rice	plasma membrane	52.02	53.44
PGSC0003DMT400026193	Potato	plastid	50.77	53.37
Zm00001d008433_P007	Maize	plastid	53.84	52.88
HORVU3Hr1G000770.2	Barley	plastid	50.35	52.7
TraesCS3A01G003900.1	Wheat	plastid	50.49	52.69
Bra028192.1-P	Field mustard	plastid	48.95	52.47
CDX74517	Canola	plastid	48.54	52.41
KXG20993	Sorghum	plastid	44.21	52.31
CDY01653	Canola	plastid	47.84	52.21
TraesCS3B01G008600.2	Wheat	plastid	49.93	52.19
AT5G38560.1	Thale cress	plastid	49.09	51.69
KRH45181	Soybean	plastid	51.88	51.38
KRH75567	Soybean	plastid	50.77	51.12
KRH01485	Soybean	plastid	53.7	50.93
KRH71097	Soybean	plastid	52.44	50.81
CDY04245	Canola	plastid	47.84	50.52
CDY07370	Canola	plastid	46.86	50.45
CDY59350	Canola	plastid	46.58	50.38
TraesCS1D01G004300.1	Wheat	plastid	45.89	50.15
GSMUA_Achr8P19800_001	Banana	cytosol	28.73	50.0
GSMUA_Achr7P26790_001	Banana	plastid	30.27	49.77
GSMUA_Achr7P14360_001	Banana	plastid	37.52	49.63
AT1G68690.2	Thale cress	plastid	48.54	49.15
PGSC0003DMT400019290	Potato	mitochondrion	47.7	49.14
HORVU1Hr1G000090.3	Barley	plastid	45.19	49.09
GSMUA_Achr5P06880_001	Banana	plastid	28.31	49.03
PGSC0003DMT400064597	Potato	plastid	50.77	48.86
GSMUA_Achr10P...	Banana	plastid	32.91	48.16
Solyc05g010140.2.1	Tomato	plastid	50.07	47.87
Solyc01g010030.2.1	Tomato	plastid	48.4	47.53
CDX95997	Canola	plastid	48.4	47.28
PGSC0003DMT400041343	Potato	plastid	48.54	47.09
AT1G26150.1	Thale cress	plastid	48.54	45.67
GSMUA_Achr6P27340_001	Banana	cytosol, endoplasmic reticulum, plastid	33.05	45.4
GSMUA_Achr1P13940_001	Banana	plastid	43.51	44.19
GSMUA_Achr5P02090_001	Banana	nucleus	35.98	43.88
CDY16146	Canola	plastid	50.35	43.13
Solyc04g006930.2.1	Tomato	plastid	47.28	42.38
GSMUA_Achr10P...	Banana	plastid	32.5	42.36
GSMUA_Achr7P00830_001	Banana	plastid	35.84	41.86
GSMUA_Achr4P10790_001	Banana	plastid	36.82	41.44
Bra024725.1-P	Field mustard	plastid	47.14	41.27
GSMUA_Achr4P32080_001	Banana	plastid	35.29	41.07
Bra004331.1-P	Field mustard	plastid	49.09	40.65
CDY38610	Canola	plastid	49.93	40.64
GSMUA_Achr4P03200_001	Banana	mitochondrion, plasma membrane	38.08	40.21
GSMUA_Achr10P...	Banana	cytosol	32.22	38.5
GSMUA_Achr3P15710_001	Banana	plastid	38.08	37.4
GSMUA_Achr7P14330_001	Banana	plasma membrane	22.45	36.84
GSMUA_Achr7P14350_001	Banana	plasma membrane	23.15	36.56
GSMUA_Achr8P13750_001	Banana	cytosol, nucleus, plastid	43.24	35.35
GSMUA_Achr6P26510_001	Banana	cytosol	24.27	24.3
GSMUA_Achr1P04890_001	Banana	cytosol	23.99	24.26
GSMUA_Achr6P18630_001	Banana	cytosol, nucleus, plasma membrane	18.13	24.21
GSMUA_Achr9P05910_001	Banana	plasma membrane	24.27	23.61
GSMUA_Achr8P04820_001	Banana	cytosol, plasma membrane, plastid	21.62	20.53
GSMUA_Achr5P07770_001	Banana	cytosol	20.64	19.68

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.22	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr10G20290_001	EnsemblPlants:GSMUA_Achr10P20290_001	EnsemblPlants:GSMUA_Achr10T20290_001	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	UniProt:M0RJV4	PFAM:PF07714	PRINTS:PR01217	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF132	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI00029523AD	SEG:seg

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G20290_001]

Coordinates

chr10:-:26347971..26358216

Molecular Weight (calculated)

74765.1 Da

IEP (calculated)

6.694

GRAVY (calculated)

-0.338

Length

717 amino acids

Sequence
(BLAST)

001: MSSSPPPSVS ATPPSSTVSP PPASFSPPST SDSPPPSPLP DPVAPPPTPP ASSPEPPPPP SPPPPAASFP PPATASPPSS SPPPSASPPP PVAFPTPPVV
101: TASPPPPITG SPPPSVAASP PPPTEVSPLP PTAVSPPPPT EVSPPPPIAA SPPPPSSASS PPQTPNAPPP LSGSPPPPPS AGPPTRTPPP PSVEPPNAPP
201: SPPLPPRSPS PPIPSAPAPK SPSTPARSPP AAPPSNSSAG TVPSPVQASP PLHSPTVPSD NSPNPISPSS NKSTPGSDVV SDNSPGGGGT KTGTAVAVGL
301: VVVFVIFCFL GIVWYVRKRR KPVAGYVPGF VMPSPRSSSM ISESPHPRSP SAPLVYHHKS ASVASDAGIV NAQSCFSYEE LYEITNGFSP QNILGEGGFG
401: CVYKGCFSDG REVAVKQLKV GSGQGEREFK AEVEIISRIH HRHLVSLVGY CISENQRLLV YDFVPNDTLH SHLHGTGKPV IDWPTRVKVA AGAARGIAYL
501: HEDCHPRIIH RDIKSSNILL DNNFEAQVSD FGLAKLAMDA CTHVSTRVIG TFGYLAPEYA SSGKLTERSD VYSFGVVLLE LITGRKPVDD TQPMGDESLV
601: EWARPRLSHA LETRDFGELP DPRLEKNYNE TEMFRMIEAA AACIRHSAAM RPQMGKVVRV LDILTDVDLN NGVKPGQSEI FNVAETAQIR LLQRMAFGSH
701: VFSSGYSQSD WSHQSDI

Best Arabidopsis Sequence Match ( AT5G38560.1 )
(BLAST)

001: MSLVPPLPIL SPPSSNSSTT APPPLQTQPT TPSAPPPVTP PPSPPQSPPP VVSSSPPPPV VSSPPPSSSP PPSPPVITSP PPTVASSPPP PVVIASPPPS
101: TPATTPPAPP QTVSPPPPPD ASPSPPAPTT TNPPPKPSPS PPGETPSPPG ETPSPPKPSP STPTPTTTTS PPPPPATSAS PPSSNPTDPS TLAPPPTPLP
201: VVPREKPIAK PTGPASNNGN NTLPSSSPGK SEVGTGGIVA IGVIVGLVFL SLFVMGVWFT RKRKRKDPGT FVGYTMPPSA YSSPQGSDVV LFNSRSSAPP
301: KMRSHSGSDY MYASSDSGMV SNQRSWFSYD ELSQVTSGFS EKNLLGEGGF GCVYKGVLSD GREVAVKQLK IGGSQGEREF KAEVEIISRV HHRHLVTLVG
401: YCISEQHRLL VYDYVPNNTL HYHLHAPGRP VMTWETRVRV AAGAARGIAY LHEDCHPRII HRDIKSSNIL LDNSFEALVA DFGLAKIAQE LDLNTHVSTR
501: VMGTFGYMAP EYATSGKLSE KADVYSYGVI LLELITGRKP VDTSQPLGDE SLVEWARPLL GQAIENEEFD ELVDPRLGKN FIPGEMFRMV EAAAACVRHS
601: AAKRPKMSQV VRALDTLEEA TDITNGMRPG QSQVFDSRQQ SAQIRMFQRM AFGSQDYSSD FFDRSQSHSS WGSRDQSRFV P

Arabidopsis Description

PERK8Proline-rich receptor-like protein kinase PERK8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFW5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.