Factsheet for AT5G38560.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
nucleus 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra028192.1-P	Field mustard	plastid	84.58	86.1
CDY01653	Canola	plastid	82.53	85.54
CDX74517	Canola	plastid	82.97	85.09
Solyc02g089750.2.1	Tomato	cytosol	19.97	77.71
VIT_14s0083g00330.t01	Wine grape	plasma membrane	46.99	73.39
Os05t0100700-02	Rice	plasma membrane	27.9	72.24
GSMUA_Achr8P29720_001	Banana	mitochondrion	37.59	64.16
TraesCS3D01G005400.1	Wheat	cytosol	37.15	63.09
TraesCS1B01G001500.1	Wheat	plastid	33.04	62.67
PGSC0003DMT400026193	Potato	plastid	56.98	56.89
KRH45181	Soybean	plastid	59.77	56.22
KRH01485	Soybean	plastid	61.67	55.56
GSMUA_Achr1P25240_001	Banana	mitochondrion	38.33	54.49
AT1G70450.1	Thale cress	cytosol	30.84	53.3
Zm00001d035774_P001	Maize	plastid	46.11	52.77
KXG32101	Sorghum	plastid	53.89	52.5
Zm00001d040127_P001	Maize	plasma membrane	52.86	52.1
GSMUA_Achr2P09600_001	Banana	plastid	50.22	52.05
KXG20993	Sorghum	plastid	45.67	51.32
GSMUA_Achr4P24400_001	Banana	plastid	49.34	50.83
HORVU3Hr1G000770.2	Barley	plastid	50.95	50.66
TraesCS3A01G003900.1	Wheat	plastid	50.66	50.22
TraesCS3B01G008600.2	Wheat	plastid	50.51	50.15
GSMUA_Achr2P14510_001	Banana	plastid	48.31	50.08
Os01t0110500-01	Rice	plasma membrane	51.25	50.0
Zm00001d008433_P007	Maize	plastid	53.01	49.45
GSMUA_Achr10P...	Banana	plastid	51.69	49.09
Os01t0738300-01	Rice	cytosol	48.31	49.03
EES01447	Sorghum	plastid	48.46	48.89
Zm00001d012774_P001	Maize	cytosol, plastid	47.72	48.65
TraesCS3A01G278100.1	Wheat	plastid	47.58	48.0
HORVU3Hr1G070200.1	Barley	plastid	47.58	48.0
Zm00001d043562_P008	Maize	cytosol	48.02	47.74
TraesCS3B01G312300.1	Wheat	plastid	47.43	47.71
TraesCS3D01G278400.1	Wheat	cytosol, plastid	47.28	47.63
HORVU1Hr1G000090.3	Barley	plastid	45.81	47.27
TraesCS1D01G004300.1	Wheat	plastid	45.52	47.26
AT1G68690.2	Thale cress	plastid	48.9	47.03
AT3G24540.1	Thale cress	cytosol	33.04	46.97
AT1G52290.1	Thale cress	plastid	34.8	46.56
AT1G26150.1	Thale cress	plastid	50.22	44.88
AT1G70460.1	Thale cress	plastid	46.4	44.51
AT1G23540.1	Thale cress	nucleus, plastid	45.96	43.47
AT3G24550.1	Thale cress	plastid	39.35	41.1
AT1G10620.1	Thale cress	cytosol	42.88	40.67
AT2G18470.3	Thale cress	plastid	36.71	39.49
AT4G34440.1	Thale cress	plastid	38.47	39.1
AT1G49270.1	Thale cress	cytosol, plastid	37.3	36.34
AT4G32710.1	Thale cress	plastid	38.47	35.84
AT3G18810.1	Thale cress	nucleus, plastid	36.12	35.14
GSMUA_Achr8P13750_001	Banana	cytosol, nucleus, plastid	42.73	33.18
AT5G56790.1	Thale cress	cytosol, plasma membrane, plastid	26.43	26.91
AT1G55200.2	Thale cress	cytosol	25.84	26.04
AT3G13690.1	Thale cress	cytosol	27.75	25.1

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.22	Gene3D:3.30.200.20	EntrezGene:833844	ProteinID:AED94334.1	EMBL:AF424623
ArrayExpress:AT5G38560	EnsemblPlantsGene:AT5G38560	RefSeq:AT5G38560	TAIR:AT5G38560	RefSeq:AT5G38560-TAIR-G	EnsemblPlants:AT5G38560.1
TAIR:AT5G38560.1	EMBL:AY075681	EMBL:AY113039	Unigene:At.8676	ProteinID:BAB10146.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004675	GO:GO:0004871
GO:GO:0005198	GO:GO:0005199	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	GO:GO:0019901
GO:GO:0038023	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	RefSeq:NP_198672.1	PFAM:PF00069	PO:PO:0000005
PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078
PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098
PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019
PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029
PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052
PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281
PRINTS:PR01218	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF132
InterPro:Pistil_extensin	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	UniProt:Q9FFW5	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI0000048BD4	SEG:seg	:	:

Description

PERK8Proline-rich receptor-like protein kinase PERK8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFW5]

Coordinates

chr5:+:15439249..15443296

Molecular Weight (calculated)

72393.5 Da

IEP (calculated)

7.448

GRAVY (calculated)

-0.430

Length

681 amino acids

Sequence
(BLAST)

001: MSLVPPLPIL SPPSSNSSTT APPPLQTQPT TPSAPPPVTP PPSPPQSPPP VVSSSPPPPV VSSPPPSSSP PPSPPVITSP PPTVASSPPP PVVIASPPPS
101: TPATTPPAPP QTVSPPPPPD ASPSPPAPTT TNPPPKPSPS PPGETPSPPG ETPSPPKPSP STPTPTTTTS PPPPPATSAS PPSSNPTDPS TLAPPPTPLP
201: VVPREKPIAK PTGPASNNGN NTLPSSSPGK SEVGTGGIVA IGVIVGLVFL SLFVMGVWFT RKRKRKDPGT FVGYTMPPSA YSSPQGSDVV LFNSRSSAPP
301: KMRSHSGSDY MYASSDSGMV SNQRSWFSYD ELSQVTSGFS EKNLLGEGGF GCVYKGVLSD GREVAVKQLK IGGSQGEREF KAEVEIISRV HHRHLVTLVG
401: YCISEQHRLL VYDYVPNNTL HYHLHAPGRP VMTWETRVRV AAGAARGIAY LHEDCHPRII HRDIKSSNIL LDNSFEALVA DFGLAKIAQE LDLNTHVSTR
501: VMGTFGYMAP EYATSGKLSE KADVYSYGVI LLELITGRKP VDTSQPLGDE SLVEWARPLL GQAIENEEFD ELVDPRLGKN FIPGEMFRMV EAAAACVRHS
601: AAKRPKMSQV VRALDTLEEA TDITNGMRPG QSQVFDSRQQ SAQIRMFQRM AFGSQDYSSD FFDRSQSHSS WGSRDQSRFV P

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.