Factsheet for AT2G18470.3

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
nucleus 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY71995	Canola	nucleus, plastid	59.24	87.62
Bra039607.1-P	Field mustard	nucleus	84.36	87.54
CDY65603	Canola	plastid	85.31	87.38
CDY59546	Canola	plastid	60.03	87.16
VIT_04s0023g01570.t01	Wine grape	nucleus	47.55	66.59
GSMUA_Achr7P26790_001	Banana	plastid	42.02	61.01
Bra037220.1-P	Field mustard	nucleus	83.41	57.64
CDY66134	Canola	nucleus	82.94	57.07
GSMUA_Achr5P02090_001	Banana	nucleus	52.61	56.63
CDY51224	Canola	plastid	84.04	56.24
KRH28656	Soybean	nucleus, plastid	54.98	55.06
KRH76796	Soybean	nucleus, plastid	55.13	55.05
GSMUA_Achr4P32080_001	Banana	plastid	52.92	54.38
AT3G24540.1	Thale cress	cytosol	40.76	53.86
GSMUA_Achr7P00830_001	Banana	plastid	52.13	53.75
KXG39820	Sorghum	plastid	48.5	53.67
Zm00001d028337_P003	Maize	nucleus	49.29	53.52
HORVU0Hr1G013830.4	Barley	plastid	47.55	53.18
TraesCS5A01G411300.1	Wheat	plastid	47.55	52.53
Zm00001d030218_P003	Maize	plastid	46.13	52.42
AT1G52290.1	Thale cress	plastid	42.02	52.26
EER91832	Sorghum	plastid	45.81	52.06
HORVU2Hr1G061030.8	Barley	plastid	43.76	51.97
KRH08293	Soybean	nucleus	48.97	51.75
AT3G24550.1	Thale cress	plastid	53.08	51.53
EER90803	Sorghum	plastid	48.97	51.41
Os10t0104800-01	Rice	plastid	45.97	51.23
GSMUA_Achr4P10790_001	Banana	plastid	51.5	51.18
KRH69932	Soybean	plastid	49.13	51.15
PGSC0003DMT400038554	Potato	nucleus, plastid	39.81	51.01
TraesCS4B01G233600.1	Wheat	nucleus, plastid	49.61	50.81
Zm00001d034257_P002	Maize	plastid	46.76	50.51
TraesCS4A01G077500.1	Wheat	nucleus	49.45	50.4
Solyc02g085430.2.1	Tomato	nucleus, plastid	47.87	49.67
EER97954	Sorghum	plastid	44.87	49.65
GSMUA_Achr4P03200_001	Banana	mitochondrion, plasma membrane	53.08	49.48
PGSC0003DMT400040010	Potato	nucleus, plastid	50.08	49.3
AT4G34440.1	Thale cress	plastid	52.13	49.25
AT1G70450.1	Thale cress	cytosol	30.65	49.24
AT3G18810.1	Thale cress	nucleus, plastid	54.19	49.0
TraesCS5B01G415000.1	Wheat	plastid	47.39	48.94
Solyc02g062790.2.1	Tomato	nucleus	50.39	48.78
Os07t0137800-00	Rice	plasma membrane	41.39	48.7
AT1G49270.1	Thale cress	cytosol, plastid	52.76	47.78
Zm00001d007848_P001	Maize	mitochondrion, plastid	45.02	46.88
PGSC0003DMT400045839	Potato	cytosol, plastid	53.24	46.29
Solyc03g034060.2.1	Tomato	cytosol, plastid	52.92	45.03
AT5G38560.1	Thale cress	plastid	39.49	36.71
AT1G70460.1	Thale cress	plastid	41.07	36.62
AT1G23540.1	Thale cress	nucleus, plastid	41.39	36.39
AT4G32710.1	Thale cress	plastid	40.76	35.29
HORVU4Hr1G065270.7	Barley	cytosol	26.86	34.55
AT1G10620.1	Thale cress	cytosol	39.18	34.54
AT1G68690.2	Thale cress	plastid	37.76	33.76
AT1G26150.1	Thale cress	plastid	39.02	32.41
AT5G56790.1	Thale cress	cytosol, plasma membrane, plastid	25.91	24.51
AT1G55200.2	Thale cress	cytosol	26.07	24.41
AT3G13690.1	Thale cress	cytosol	27.96	23.51

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.22	Gene3D:3.30.200.20	EntrezGene:816362	ProteinID:AAD12219.1	ProteinID:AAM15257.1
ProteinID:AEC06772.1	ProteinID:ANM62350.1	ProteinID:ANM62351.1	ArrayExpress:AT2G18470	EnsemblPlantsGene:AT2G18470	RefSeq:AT2G18470
TAIR:AT2G18470	RefSeq:AT2G18470-TAIR-G	EnsemblPlants:AT2G18470.3	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468
GO:GO:0007154	GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009719	GO:GO:0009738	GO:GO:0009791	GO:GO:0009845	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
GO:GO:0019722	GO:GO:0038023	GO:GO:0048364	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	RefSeq:NP_001324511.1
RefSeq:NP_001324512.1	RefSeq:NP_179437.1	Symbol:PERK4	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF285	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	UniProt:Q9ZNQ8
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI000003819C	SEG:seg

Description

PERK4Proline-rich receptor-like protein kinase PERK4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZNQ8]

Coordinates

chr2:-:8005062..8008681

Molecular Weight (calculated)

66655.5 Da

IEP (calculated)

7.939

GRAVY (calculated)

-0.644

Length

633 amino acids

Sequence
(BLAST)

001: MASSPESAPP TNSTSSPSPP SNTNSTTSSP PAPSPPSPTP PQGDSSSSPP PDSTSPPAPQ APNPPNSSNN SPSPPSQGGG GERGNGGNNG GNDTPPSRGS
101: PPSPPSRSNG DNGGSRSSPP GDTGGSRSDN PPSSGGSSGG GGGGRSNTNT AIIVGVLVGA GLLMIVLIIV CLRRKKKRKD SFYPEPMKGN QYQYYGNNNN
201: NNASQNYPNW HLNSQGQNQQ STGGWGGGGP SPPPPPRMPT SGEDSSMYSG PSRPVLPPPS PALALGFNKS TFTYQELAAA TGGFTDANLL GQGGFGYVHK
301: GVLPSGKEVA VKSLKAGSGQ GEREFQAEVD IISRVHHRYL VSLVGYCIAD GQRMLVYEFV PNKTLEYHLH GKNLPVMEFS TRLRIALGAA KGLAYLHEDC
401: HPRIIHRDIK SANILLDFNF DAMVADFGLA KLTSDNNTHV STRVMGTFGY LAPEYASSGK LTEKSDVFSY GVMLLELITG KRPVDNSITM DDTLVDWARP
501: LMARALEDGN FNELADARLE GNYNPQEMAR MVTCAAASIR HSGRKRPKMS QIVRALEGEV SLDALNEGVK PGHSNVYGSL GASSDYSQTS YNADMKKFRQ
601: IALSSQEFPV SDCEGTSSND SRDMGTKSPT PPK

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.