Factsheet for GSMUA_Achr4P03200_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

plastid 2
plasma membrane 3
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P10790_001	Banana	plastid	72.75	77.55
GSMUA_Achr7P26790_001	Banana	plastid	46.54	72.48
VIT_03s0063g02440.t01	Wine grape	plastid	44.77	71.87
Bra034626.1-P	Field mustard	cytosol, nucleus, plastid	40.21	70.36
Bra037558.1-P	Field mustard	cytosol	29.75	68.94
GSMUA_Achr5P06880_001	Banana	plastid	40.94	67.15
VIT_04s0023g01570.t01	Wine grape	nucleus	44.33	66.59
GSMUA_Achr8P19800_001	Banana	cytosol	39.32	64.81
Bra022359.1-P	Field mustard	plasma membrane	45.51	64.38
CDX92276	Canola	plasma membrane	45.51	64.38
GSMUA_Achr5P02090_001	Banana	nucleus	55.67	64.29
GSMUA_Achr7P00830_001	Banana	plastid	54.64	60.42
GSMUA_Achr10P...	Banana	plastid	43.15	59.8
Zm00001d030218_P003	Maize	plastid	48.16	58.71
EER91832	Sorghum	plastid	47.72	58.17
GSMUA_Achr4P32080_001	Banana	plastid	52.43	57.79
KXG39820	Sorghum	plastid	48.6	57.69
Zm00001d028337_P003	Maize	nucleus	49.19	57.29
GSMUA_Achr7P14360_001	Banana	plastid	44.18	55.35
KRH60853	Soybean	cytosol, plastid	51.55	54.26
Bra039607.1-P	Field mustard	nucleus	48.45	53.93
GSMUA_Achr8P29720_001	Banana	mitochondrion	31.52	53.63
CDY65603	Canola	plastid	48.75	53.56
Os10t0104800-01	Rice	plastid	44.62	53.35
CDX95494	Canola	nucleus, plastid	53.76	53.21
AT2G18470.3	Thale cress	plastid	49.48	53.08
CDY18547	Canola	nucleus, plastid	53.46	52.99
KRH76796	Soybean	nucleus, plastid	48.9	52.37
AT1G49270.1	Thale cress	cytosol, plastid	53.76	52.22
CDY48859	Canola	nucleus, plastid	52.58	52.12
TraesCS4B01G233600.1	Wheat	nucleus, plastid	47.28	51.94
CDY48084	Canola	nucleus, plastid	52.43	51.9
CDY71995	Canola	nucleus, plastid	32.7	51.87
Bra018782.1-P	Field mustard	plastid	51.84	51.84
TraesCS4A01G077500.1	Wheat	nucleus	47.28	51.69
KRH28656	Soybean	nucleus, plastid	47.86	51.42
CDY59546	Canola	plastid	32.99	51.38
CDX99312	Canola	nucleus, plastid	49.48	51.3
AT3G18810.1	Thale cress	nucleus, plastid	52.87	51.29
CDY61983	Canola	cytosol, plastid	52.43	51.08
CDX76282	Canola	nucleus, plastid	49.63	50.98
CDY46249	Canola	nucleus, plastid	49.78	50.9
Bra001723.1-P	Field mustard	cytosol, plastid	52.28	50.71
AT4G34440.1	Thale cress	plastid	49.78	50.45
CDX82325	Canola	cytosol, plastid	52.58	50.07
KRH08293	Soybean	nucleus	43.74	49.58
CDX75434	Canola	nucleus, plastid	49.04	49.55
GSMUA_Achr10P...	Banana	cytosol	43.74	49.5
Bra011534.1-P	Field mustard	nucleus, plastid	48.9	49.4
KRH69932	Soybean	plastid	43.89	49.01
Solyc02g085430.2.1	Tomato	nucleus, plastid	43.0	47.87
PGSC0003DMT400038554	Potato	nucleus, plastid	34.76	47.77
PGSC0003DMT400040010	Potato	nucleus, plastid	45.07	47.59
Solyc10g051330.1.1	Tomato	nucleus	41.83	47.33
GSMUA_Achr10P...	Banana	plastid	38.0	46.91
Solyc02g062790.2.1	Tomato	nucleus	45.07	46.79
GSMUA_Achr1P25240_001	Banana	mitochondrion	32.55	46.14
PGSC0003DMT400001868	Potato	nucleus, plastid	46.1	45.89
PGSC0003DMT400062758	Potato	nucleus	48.31	45.81
CDX69059	Canola	endoplasmic reticulum, plasma membrane	48.01	45.66
PGSC0003DMT400045839	Potato	cytosol, plastid	48.9	45.6
Solyc01g109530.2.1	Tomato	nucleus	46.39	45.13
Solyc11g044460.1.1	Tomato	nucleus	48.16	44.67
Solyc03g034060.2.1	Tomato	cytosol, plastid	48.6	44.35
GSMUA_Achr7P14330_001	Banana	plasma membrane	28.28	43.94
GSMUA_Achr7P14350_001	Banana	plasma membrane	29.01	43.39
GSMUA_Achr6P27340_001	Banana	cytosol, endoplasmic reticulum, plastid	32.25	41.95
GSMUA_Achr2P09600_001	Banana	plastid	39.91	41.25
GSMUA_Achr2P14510_001	Banana	plastid	39.91	41.25
GSMUA_Achr4P24400_001	Banana	plastid	39.47	40.54
GSMUA_Achr1P13940_001	Banana	plastid	40.8	39.24
HORVU4Hr1G065270.7	Barley	cytosol	28.28	39.02
GSMUA_Achr10P...	Banana	plastid	40.21	38.08
GSMUA_Achr3P15710_001	Banana	plastid	40.06	37.26
CDY66134	Canola	nucleus	49.63	36.63
Bra037220.1-P	Field mustard	nucleus	49.34	36.57
CDY51224	Canola	plastid	49.63	35.62
GSMUA_Achr6P18630_001	Banana	cytosol, nucleus, plasma membrane	21.06	26.63
GSMUA_Achr6P26510_001	Banana	cytosol	26.66	25.28
GSMUA_Achr1P04890_001	Banana	cytosol	26.21	25.11
GSMUA_Achr8P13750_001	Banana	cytosol, nucleus, plastid	31.08	24.06
GSMUA_Achr9P05910_001	Banana	plasma membrane	26.07	24.02
GSMUA_Achr8P04820_001	Banana	cytosol, plasma membrane, plastid	24.59	22.12
GSMUA_Achr5P07770_001	Banana	cytosol	21.65	19.55

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.22	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr4G03200_001	EnsemblPlants:GSMUA_Achr4P03200_001	EnsemblPlants:GSMUA_Achr4T03200_001	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	UniProt:M0SKN7	PFAM:PF07714	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF192	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI0002968C6F	SEG:seg	:

Description

Somatic embryogenesis receptor kinase, putative [Source:GMGC_GENE;Acc:GSMUA_Achr4G03200_001]

Coordinates

chr4:-:2573939..2579453

Molecular Weight (calculated)

72832.2 Da

IEP (calculated)

7.020

GRAVY (calculated)

-0.514

Length

679 amino acids

Sequence
(BLAST)

001: MLKCRIIAIC WRRRAAARWV ECSALELHPR RMDSSPVTAP PLDDSSVPSP PTPAAPPPSD SLSSSPTSDS STSPSSQPPS KSESDTSTTK NSPPPPSSSS
101: SQSLPSSPPP SSHKSSSSSS SSPSLPSESS SPTTPSSSDA SSSPASRSPS KSLPSQTSPP SKDSSTHRTN DSDANLPLIL GVTVGLGIFI MLMIVSFVLC
201: TKKKKKNPNH VMHYYDAPGP NGGFYNGGSL PRWQNGAQGM DYGGKMPPPP GAAMSPGGGW HQSPHPPMMA SGDMSSLYSG FHGPPLPPPS PNVALGFNQS
301: TFTYDEIAAV TNGFSRDNLL GQGGFGYVYK GVLPNGKEIA VKQLKSGSGQ GEREFQAEVE IISRVHHRHL VSLVGYCIAG AQRMLVYEFV PNQTLEYHLH
401: GKDLPTMDWP TRLKIAIGSA KGLAYLHEDC HPRIIHRDIK GANILLDNKF EAMVADFGLA KLSSDTNTHV STRVMGTFGY LAPEYASSGK LTEKSDVFSF
501: GVMLLELITG RRPIDLTGDM EDSLVEWARP LLARALADQN FDELVDPRLE NNYDVGEMLR MAASAAASVR HSARRRPKMS QIVRGLEGDV SLEDLNEGVK
601: PGQSTIFNSS SDYDSASYSS DMRRFRKLAL ESNDYSNEYS GAASDYGLNP SESGSSGEIS SARGQRKKSQ PTLGTTWED

Best Arabidopsis Sequence Match ( AT1G49270.1 )
(BLAST)

001: MAEGQSPENS PPAPPPPSPP SPPSSNDQQT TSPPPSDNQE TTSPPPPSSP DIAPPPQQQQ ESPPPPLPEN SSDGSSSSSP PPPSDSSSQS QSPPPPSTSP
101: PQQSDNNGNK GNNNENNKGN DGSSGDGGNK NMSHTPPPPS KTSDHSSHSQ PRSLAPPTSN SGSNSSSNDG LNIGAVIGLV AAAGILFIVM ILLCVCCFRK
201: KKKKSKLDQM PYYGSNAYPA GKTGGDQYYN QNAATQQQQH YNQNDHIVNL PPPPGSMGTN WVSSPPPPPP GNWQPMPSPP APVSGGANVI QSGEMSSNFS
301: SGPYAPSLPP PHPSVALGFN NSTFTYEELA SATQGFSKDR LLGQGGFGYV HKGILPNGKE IAVKSLKAGS GQGEREFQAE VEIISRVHHR HLVSLVGYCS
401: NAGGQRLLVY EFLPNDTLEF HLHGKSGTVM DWPTRLKIAL GSAKGLAYLH EDCHPKIIHR DIKASNILLD HNFEAKVADF GLAKLSQDNN THVSTRVMGT
501: FGYLAPEYAS SGKLTEKSDV FSFGVMLLEL ITGRGPVDLS GDMEDSLVDW ARPLCMRVAQ DGEYGELVDP FLEHQYEPYE MARMVACAAA AVRHSGRRRP
601: KMSQIVRTLE GDASLDDLDD GVKPKQSSSG GEGSSDYEMG TYGAEMRKFR KVTLESRDYG ASSEYGATSE YGLDPSSSSS EEMHIGGSTS KTTTTNRGI

Arabidopsis Description

PERK7Proline-rich receptor-like protein kinase PERK7 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI96]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.