CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 3
plastid 3
plasma membrane 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra034626.1-P	Field mustard	cytosol, nucleus, plastid	41.4	68.81
VIT_03s0063g02440.t01	Wine grape	plastid	44.03	67.14
Bra037558.1-P	Field mustard	cytosol	29.46	64.85
Bra022359.1-P	Field mustard	plasma membrane	46.2	62.08
CDX92276	Canola	plasma membrane	46.2	62.08
GSMUA_Achr7P26790_001	Banana	plastid	41.24	61.01
GSMUA_Achr4P10790_001	Banana	plastid	53.8	54.47
KRH48383	Soybean	mitochondrion	56.59	54.4
GSMUA_Achr5P02090_001	Banana	nucleus	49.46	54.25
KRH39292	Soybean	plastid	55.81	54.22
KXG39820	Sorghum	plastid	47.29	53.32
Zm00001d030218_P003	Maize	plastid	46.05	53.32
EER91832	Sorghum	plastid	45.74	52.96
Bra018782.1-P	Field mustard	plastid	55.66	52.87
Zm00001d028337_P003	Maize	nucleus	47.75	52.83
CDY48859	Canola	nucleus, plastid	55.66	52.41
KRH76796	Soybean	nucleus, plastid	51.47	52.37
GSMUA_Achr7P00830_001	Banana	plastid	49.3	51.79
CDY48084	Canola	nucleus, plastid	55.04	51.75
KRH28656	Soybean	nucleus, plastid	50.7	51.74
GSMUA_Achr4P03200_001	Banana	mitochondrion, plasma membrane	54.26	51.55
AT4G34440.1	Thale cress	plastid	53.33	51.34
CDX76282	Canola	nucleus, plastid	52.56	51.29
HORVU0Hr1G013830.4	Barley	plastid	44.96	51.24
GSMUA_Achr4P32080_001	Banana	plastid	48.84	51.14
CDY46249	Canola	nucleus, plastid	52.4	50.9
CDX95494	Canola	nucleus, plastid	53.95	50.73
HORVU2Hr1G061030.8	Barley	plastid	41.86	50.66
TraesCS5A01G411300.1	Wheat	plastid	44.96	50.61
AT1G49270.1	Thale cress	cytosol, plastid	54.57	50.36
CDX75434	Canola	nucleus, plastid	52.4	50.3
CDY18547	Canola	nucleus, plastid	53.33	50.22
Bra011534.1-P	Field mustard	nucleus, plastid	52.25	50.15
CDX99312	Canola	nucleus, plastid	50.39	49.62
Bra001723.1-P	Field mustard	cytosol, plastid	53.8	49.57
CDY61983	Canola	cytosol, plastid	53.49	49.5
KRH47030	Soybean	nucleus, plastid	43.72	49.47
AT3G18810.1	Thale cress	nucleus, plastid	53.64	49.43
Zm00001d034257_P002	Maize	plastid	44.65	49.15
KRH69932	Soybean	plastid	46.2	49.01
CDX82325	Canola	cytosol, plastid	54.11	48.95
EER90803	Sorghum	plastid	45.43	48.59
TraesCS4B01G233600.1	Wheat	nucleus, plastid	46.51	48.54
TraesCS4A01G077500.1	Wheat	nucleus	46.51	48.31
Solyc10g051330.1.1	Tomato	nucleus	44.65	48.0
KRH08293	Soybean	nucleus	44.5	47.91
Os10t0104800-01	Rice	plastid	42.17	47.89
PGSC0003DMT400062758	Potato	nucleus	53.02	47.77
Os07t0137800-00	Rice	plasma membrane	39.53	47.4
TraesCS5B01G415000.1	Wheat	plastid	44.96	47.31
Solyc11g044460.1.1	Tomato	nucleus	53.49	47.13
EER97954	Sorghum	plastid	41.71	47.03
PGSC0003DMT400001868	Potato	nucleus, plastid	48.99	46.33
CDX69059	Canola	endoplasmic reticulum, plasma membrane	51.01	46.08
Solyc01g109530.2.1	Tomato	nucleus	49.46	45.7
KRH07595	Soybean	plastid	37.05	44.92
Zm00001d007848_P001	Maize	mitochondrion, plastid	41.71	44.24
KRH62013	Soybean	plastid	37.67	44.02
KRH52669	Soybean	plastid	45.27	43.39
KRH47029	Soybean	plastid	36.28	42.39
KRG99346	Soybean	plastid	38.29	39.71
KRH74591	Soybean	nucleus, plastid	41.09	38.63
KRH69571	Soybean	nucleus, plastid	40.62	38.53
KRH01485	Soybean	plastid	43.57	37.17
KRH45666	Soybean	cytosol, nucleus, plastid	41.09	36.91
KRH45181	Soybean	plastid	41.09	36.6
KRH75567	Soybean	plastid	40.0	36.24
KRH71097	Soybean	plastid	40.93	35.68
KRH56245	Soybean	cytosol	18.91	34.37
HORVU4Hr1G065270.7	Barley	cytosol	26.05	34.15
KRH09998	Soybean	cytosol	26.98	24.86
KRH41431	Soybean	cytosol, nucleus, plasma membrane	25.89	24.81
KRH44172	Soybean	cytosol	28.37	24.4
KRH47146	Soybean	cytosol	28.37	24.4
KRH23335	Soybean	cytosol	25.43	23.91
KRH60141	Soybean	cytosol	25.58	23.57
KRH56244	Soybean	cytosol	21.55	22.82
KRH18072	Soybean	cytosol	20.93	22.46
KRH20591	Soybean	cytosol	23.26	22.32
KRH53345	Soybean	cytosol	21.09	22.22
KRH62713	Soybean	cytosol	23.41	21.63
KRH05755	Soybean	cytosol	23.72	21.49
KRH15276	Soybean	cytosol	24.34	21.19
KRH64578	Soybean	cytosol	17.52	20.0

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100806299	MapMan:18.4.1.22	Gene3D:3.30.200.20	EMBL:ACUP02002140	EnsemblPlantsGene:GLYMA_04G013300
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004675
GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166	GO:GO:0007178
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719	UniProt:K7KHK0
EnsemblPlants:KRH60853	ProteinID:KRH60853	ProteinID:KRH60853.1	InterPro:Kinase-like_dom_sf	PFAM:PF07714	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF285	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI000233A69F
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:1011233..1014696

Molecular Weight (calculated)

68778.2 Da

IEP (calculated)

7.546

GRAVY (calculated)

-0.656

Length

645 amino acids

Sequence
(BLAST)

001: MASNSDKDSP TPPSPDSSSS QSPPSSPPPS QDSSSPPPSS QDNSSPPPSS PPPSSPPPSS SPPPSPPPPS SNDQKSPPPP SDSSSSPPSP PPPPPPDKDS
101: GSHRSPPPPP HSRHEFSPPP PPNHRLSPPK SSSSGSSDGL KDSESHSLSM PVIIGIAAGA GILLLLLLVV VCACSRRKKR SQPSVSYYAN QPSDDGYYKR
201: PRGGQNQYGY NNNGEHVLNI PPPPGAGWGA APQPPQMISS DMSNSSFSGS HGPVLPPPHP TVALGFNQSS FTYDELSAAT GGFSQRNLLG QGGFGYVHKG
301: VLPNGKEIAV KSLKSTGGQG DREFQAEVDI ISRVHHRHLV SLVGYCMSES KKLLVYEFVP KGTLEFHLHG KGRPVMDWNT RLKIAIGSAK GLAYLHEDCH
401: PRIIHRDIKG ANILLENNFE AKVADFGLAK ISQDTNTHVS TRVMGTFGYM APEYASSGKL TDKSDVFSFG IMLLELITGR RPVNNTGEYE DTLVDWARPL
501: CTKAMENGTF EGLVDPRLED NYDKQQMASM VACAAFSVRH SAKRRPRMSQ IVRVLEGDVS LDALNHEGVK PGQSSMFSSA SREYGAEAYG ADMMRFRKLA
601: LDSGVGSSEY GGTSEYGLNP SSSSSEQSSA EYARRTTGGG RMHTP

Best Arabidopsis Sequence Match ( AT3G24550.1 )
(BLAST)

001: MSTAPSPGTT PSPSPPSPPT NSTTTTPPPA ASSPPPTTTP SSPPPSPSTN STSPPPSSPL PPSLPPPSPP GSLTPPLPQP SPSAPITPSP PSPTTPSNPR
101: SPPSPNQGPP NTPSGSTPRT PSNTKPSPPS DSSDGLSTGV VVGIAIGGVA ILVILTLICL LCKKKRRRRH DDEAAYYVPP PPPSGPKAGG PYGGQQQYWQ
201: QQNASRPSDN HVVTSLPPPK PPSPPRKPPP PPPPPAFMSS SGGSDYSDLP VLPPPSPGLV LGFSKSTFTY EELSRATNGF SEANLLGQGG FGYVHKGILP
301: SGKEVAVKQL KAGSGQGERE FQAEVEIISR VHHRHLVSLI GYCMAGVQRL LVYEFVPNNN LEFHLHGKGR PTMEWSTRLK IALGSAKGLS YLHEDCNPKI
401: IHRDIKASNI LIDFKFEAKV ADFGLAKIAS DTNTHVSTRV MGTFGYLAPE YAASGKLTEK SDVFSFGVVL LELITGRRPV DANNVYVDDS LVDWARPLLN
501: RASEEGDFEG LADSKMGNEY DREEMARMVA CAAACVRHSA RRRPRMSQIV RALEGNVSLS DLNEGMRPGH SNVYSSYGGS TDYDTSQYND DMIKFRKMAL
601: GTQEYGTTGE YSNPTSDYGL YPSGSSSEGQ ATREMEMGKI KKTGQGYSGP SL

Arabidopsis Description

PERK1Proline-rich receptor-like protein kinase PERK1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LV48]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.