CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 3
plastid 4
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	vacuole
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92276	Canola	plasma membrane	72.21	98.54
AT3G18810.1	Thale cress	nucleus, plastid	82.9	77.57
CDY61983	Canola	cytosol, plastid	81.98	77.04
CDX82325	Canola	cytosol, plastid	82.75	76.02
CDX95494	Canola	nucleus, plastid	78.32	74.78
CDY18547	Canola	nucleus, plastid	78.02	74.6
VIT_03s0063g02440.t01	Wine grape	plastid	43.36	67.14
CDY48859	Canola	nucleus, plastid	67.79	64.82
CDY48084	Canola	nucleus, plastid	67.48	64.43
GSMUA_Achr7P26790_001	Banana	plastid	40.15	60.32
CDX75275	Canola	cytosol	31.76	59.09
GSMUA_Achr5P02090_001	Banana	nucleus	50.69	56.46
CDX75434	Canola	nucleus, plastid	57.56	56.1
CDX76282	Canola	nucleus, plastid	54.66	54.16
CDY46249	Canola	nucleus, plastid	54.5	53.77
GSMUA_Achr4P10790_001	Banana	plastid	51.6	53.06
GSMUA_Achr7P00830_001	Banana	plastid	49.62	52.93
KXG39820	Sorghum	plastid	46.11	52.8
Zm00001d030218_P003	Maize	plastid	44.58	52.42
CDX69059	Canola	endoplasmic reticulum, plasma membrane	56.79	52.1
EER91832	Sorghum	plastid	44.27	52.06
Zm00001d028337_P003	Maize	nucleus	46.26	51.97
GSMUA_Achr4P32080_001	Banana	plastid	48.55	51.62
HORVU0Hr1G013830.4	Barley	plastid	44.12	51.06
CDY65603	Canola	plastid	47.79	50.65
KRH60853	Soybean	cytosol, plastid	49.62	50.39
TraesCS5A01G411300.1	Wheat	plastid	43.66	49.91
HORVU2Hr1G061030.8	Barley	plastid	40.61	49.91
CDY02546	Canola	plastid	39.08	49.9
GSMUA_Achr4P03200_001	Banana	mitochondrion, plasma membrane	51.3	49.48
CDY47531	Canola	plastid	38.93	49.32
Zm00001d034257_P002	Maize	plastid	44.12	49.32
EER90803	Sorghum	plastid	45.19	49.09
TraesCS4B01G233600.1	Wheat	nucleus, plastid	45.65	48.38
CDY71995	Canola	nucleus, plastid	31.6	48.36
Os07t0137800-00	Rice	plasma membrane	39.69	48.33
Os10t0104800-01	Rice	plastid	41.68	48.06
TraesCS4A01G077500.1	Wheat	nucleus	45.5	47.99
CDY39543	Canola	plastid	47.48	47.92
CDX77417	Canola	plastid	47.33	47.69
CDY59546	Canola	plastid	31.3	47.02
TraesCS5B01G415000.1	Wheat	plastid	43.66	46.66
Solyc10g051330.1.1	Tomato	nucleus	42.14	46.0
EER97954	Sorghum	plastid	39.69	45.45
PGSC0003DMT400001868	Potato	nucleus, plastid	47.18	45.31
Solyc01g109530.2.1	Tomato	nucleus	47.18	44.27
PGSC0003DMT400062758	Potato	nucleus	47.94	43.85
Zm00001d007848_P001	Maize	mitochondrion, plastid	40.15	43.26
CDY48706	Canola	cytosol	34.81	43.18
Solyc11g044460.1.1	Tomato	nucleus	48.09	43.03
CDY41442	Canola	plastid	38.17	37.94
CDX91719	Canola	plastid	37.86	36.8
CDY03749	Canola	plastid	37.56	36.61
CDY01653	Canola	plastid	36.03	35.92
CDY09439	Canola	plastid	37.1	35.58
HORVU4Hr1G065270.7	Barley	cytosol	26.72	35.57
CDX74517	Canola	plastid	35.88	35.39
CDX68882	Canola	plastid	37.71	35.14
CDY44156	Canola	nucleus	37.86	34.83
CDY66134	Canola	nucleus	48.7	34.67
CDY59350	Canola	plastid	34.96	34.54
CDY51224	Canola	plastid	48.85	33.83
CDY11592	Canola	plastid	37.25	33.2
CDY51639	Canola	nucleus	35.57	33.19
CDX93398	Canola	cytosol	36.18	33.15
CDY07370	Canola	plastid	33.44	32.88
CDY04245	Canola	plastid	34.05	32.84
CDY37963	Canola	cytosol	35.88	32.59
CDY20960	Canola	cytosol	36.03	32.42
CDY47133	Canola	cytosol, plastid	36.95	32.18
CDY20615	Canola	cytosol	35.57	32.05
CDX95997	Canola	plastid	33.44	29.84
CDY46900	Canola	plasma membrane	31.76	28.15
CDY16146	Canola	plastid	35.57	27.84
CDY10586	Canola	cytosol, nucleus, plasma membrane	24.43	26.49
CDY02454	Canola	cytosol, nucleus, plasma membrane	24.27	26.32
CDX75728	Canola	cytosol	23.97	26.17
CDY20711	Canola	cytosol, plasma membrane, plastid	25.65	25.38
CDY38610	Canola	plastid	34.05	25.31
CDY32758	Canola	plasma membrane	25.34	24.96
CDX82522	Canola	cytosol	25.04	24.96
CDY23630	Canola	cytosol	26.41	23.35
CDY55134	Canola	cytosol	26.41	23.01
CDY51732	Canola	cytosol	26.41	23.01
CDX97507	Canola	cytosol, mitochondrion, nucleus	26.11	22.89
CDY32884	Canola	plasma membrane	21.37	22.65
CDY32921	Canola	plasma membrane	22.9	20.0
CDY32757	Canola	plasma membrane	18.17	16.78
CDY48704	Canola	cytosol, mitochondrion, plasma membrane, plastid	9.47	15.98

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.22	Gene3D:3.30.200.20	GO:A0A078EE21	EnsemblPlants:CDX99312	ProteinID:CDX99312
ProteinID:CDX99312.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00107588001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF07714	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF285
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
TMHMM:TMhelix	UniParc:UPI0004EE3B45	SEG:seg	:	:	:

Description

BnaC05g34270D

Coordinates

chrLK031909:+:1048010..1051159

Molecular Weight (calculated)

70421.8 Da

IEP (calculated)

8.018

GRAVY (calculated)

-0.941

Length

655 amino acids

Sequence
(BLAST)

001: MAEGQSDSNN NQQQSPPSPN SSSSAPPSPP SSDSQPPPSQ QQGNNNNGGN NDNNNKNGNN NNGGNNDNNN NNGNNNNGGN NDNNNSNGNN NNDGNNGNKN
101: NGNNGNNNKG NNNDNNNNNK GNNNSNKNNN GGSKNRSPPP PSKNSGRNSP PKSLSPPKSS RGGSKSSRND TPNMGAIIGI AASAGLLLLV MILFCVCCCR
201: KKKKKKNQMP YYASNGFNGA SGQNQQQQQQ YNNQSDHVMN VGNNNWMNSP PPPPPGTWQP TQPMPVSGGL NSSDMSSNYS GPHGPALPPP HPSVALGFNQ
301: STFTYDELAA ATQGFSQARL LGQGGFGYVH KGILPNGKEI AVKSLKAGSG QGEREFQAEV DIISRVHHRF LVSLVGYCIA GGQRMLVYEF LPNDTLEFHL
401: HGKSGVILGW TTRLRIALGS AKGLAYLHED CHPKIIHRDI KASNILLDES FEAKVADFGL AKLSQDNVTH VSTRIMGTFG YLAPEYASSG KLTDRSDVFS
501: FGVMLLELIT GRRPVDLTGE MEDSLVDWAR PLCINAAQDG DYSELADPRL ENEYEPNEMA RMVACAAAAV RHSARRRPKM SQIVRALEGD ASLDDLNEGG
601: KPGQSSNLAR GSSSDYESST YSADMRKFRK TALDSQEYGA SSEYGNTNEY EQRRN

Best Arabidopsis Sequence Match ( AT3G18810.1 )
(BLAST)

001: MAEGQSPENS PPSPTPPSPS SSDNQQQSSP PPSDSSSPSP PAPPPPDDSS NGSPQPPSSD SQSPPSPQGN NNNDGNNGNN NNDNNNNNNG NNNNDNNNGN
101: NKDNNNNGNN NNGNNNNGND NNGNNNNGNN NDNNNQNNGG GSNNRSPPPP SRNSDRNSPS PPRALAPPRS SGGGSNSSGN NEPNTAAIVG IVAGAGLLFL
201: VMILFCVCCC RKKKKKHQMP YYAGNGYATG KGDQYQQQQY NNQSDHVMNL SQQYPGSNGN NNWMNSPPPP PPGSWQPSPP PPPPPVSGGM NGNSSDFSSN
301: YSGPHGPSVP PPHPSVALGF NKSTFTYDEL AAATQGFSQS RLLGQGGFGY VHKGILPNGK EIAVKSLKAG SGQGEREFQA EVDIISRVHH RFLVSLVGYC
401: IAGGQRMLVY EFLPNDTLEF HLHGKSGKVL DWPTRLKIAL GSAKGLAYLH EDCHPRIIHR DIKASNILLD ESFEAKVADF GLAKLSQDNV THVSTRIMGT
501: FGYLAPEYAS SGKLTDRSDV FSFGVMLLEL VTGRRPVDLT GEMEDSLVDW ARPICLNAAQ DGDYSELVDP RLENQYEPHE MAQMVACAAA AVRHSARRRP
601: KMSQIVRALE GDATLDDLSE GGKAGQSSFL GRGSSSDYDS STYSADMKKF RKVALDSHEY GASSEYGNTS EYGLDPSSSS SEEIRRGGAN NNKTTPSRDH

Arabidopsis Description

PERK6Putative proline-rich receptor-like protein kinase PERK6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LS95]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.