Factsheet for Zm00001d007848_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 2
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER97954	Sorghum	plastid	74.51	79.2
HORVU2Hr1G061030.8	Barley	plastid	56.41	64.35
VIT_03s0063g02440.t01	Wine grape	plastid	41.45	59.57
Bra034626.1-P	Field mustard	cytosol, nucleus, plastid	37.99	59.54
Bra037558.1-P	Field mustard	cytosol	27.47	57.0
Os07t0137800-00	Rice	plasma membrane	48.36	54.65
VIT_04s0023g01570.t01	Wine grape	nucleus	40.62	54.65
Bra022359.1-P	Field mustard	plasma membrane	41.12	52.08
CDX92276	Canola	plasma membrane	41.12	52.08
Zm00001d037464_P001	Maize	cytosol, plastid	33.88	51.37
Zm00001d034257_P002	Maize	plastid	47.7	49.49
Zm00001d012743_P002	Maize	cytosol	33.22	49.27
Zm00001d038708_P001	Maize	plastid	35.53	48.54
GSMUA_Achr5P02090_001	Banana	nucleus	46.05	47.62
Zm00001d030218_P003	Maize	plastid	43.42	47.4
GSMUA_Achr7P00830_001	Banana	plastid	46.71	46.25
Zm00001d028337_P003	Maize	nucleus	44.24	46.14
GSMUA_Achr4P32080_001	Banana	plastid	46.55	45.94
Bra039607.1-P	Field mustard	nucleus	45.72	45.57
AT2G18470.3	Thale cress	plastid	46.88	45.02
CDY65603	Canola	plastid	45.72	44.98
CDY71995	Canola	nucleus, plastid	30.43	43.22
KRH08293	Soybean	nucleus	42.11	42.74
KRH69932	Soybean	plastid	42.6	42.6
Zm00001d039311_P001	Maize	mitochondrion	43.42	42.58
CDY59546	Canola	plastid	30.43	42.43
KRH76796	Soybean	nucleus, plastid	44.24	42.43
KRH28656	Soybean	nucleus, plastid	43.75	42.09
Zm00001d037811_P001	Maize	plasma membrane	34.21	42.02
KRH60853	Soybean	cytosol, plastid	44.24	41.71
Solyc02g085430.2.1	Tomato	nucleus, plastid	41.78	41.64
PGSC0003DMT400038554	Potato	nucleus, plastid	33.72	41.5
PGSC0003DMT400040010	Potato	nucleus, plastid	42.93	40.59
Zm00001d010421_P002	Maize	plasma membrane	45.23	40.5
CDY48859	Canola	nucleus, plastid	45.56	40.44
Bra018782.1-P	Field mustard	plastid	45.07	40.35
CDY48084	Canola	nucleus, plastid	45.39	40.23
CDX99312	Canola	nucleus, plastid	43.26	40.15
Solyc02g062790.2.1	Tomato	nucleus	42.93	39.91
Solyc10g051330.1.1	Tomato	nucleus	39.31	39.83
Bra011534.1-P	Field mustard	nucleus, plastid	43.75	39.58
CDY61983	Canola	cytosol, plastid	45.23	39.45
CDX75434	Canola	nucleus, plastid	43.59	39.43
Bra001723.1-P	Field mustard	cytosol, plastid	45.23	39.29
CDX95494	Canola	nucleus, plastid	44.24	39.21
CDX76282	Canola	nucleus, plastid	42.6	39.18
CDY46249	Canola	nucleus, plastid	42.76	39.16
AT3G18810.1	Thale cress	nucleus, plastid	45.07	39.14
AT1G49270.1	Thale cress	cytosol, plastid	44.9	39.06
CDY18547	Canola	nucleus, plastid	43.75	38.83
AT4G34440.1	Thale cress	plastid	42.76	38.81
CDX82325	Canola	cytosol, plastid	45.23	38.57
PGSC0003DMT400045839	Potato	cytosol, plastid	46.05	38.46
Solyc03g034060.2.1	Tomato	cytosol, plastid	46.05	37.63
PGSC0003DMT400062758	Potato	nucleus	44.24	37.57
Zm00001d035774_P001	Maize	plastid	36.35	37.14
PGSC0003DMT400001868	Potato	nucleus, plastid	41.61	37.1
Solyc11g044460.1.1	Tomato	nucleus	43.75	36.34
Solyc01g109530.2.1	Tomato	nucleus	41.61	36.25
CDX69059	Canola	endoplasmic reticulum, plasma membrane	42.43	36.13
Zm00001d040127_P001	Maize	plasma membrane	37.17	32.71
Zm00001d011450_P001	Maize	plastid	36.68	32.65
Zm00001d008433_P007	Maize	plastid	37.66	31.37
Bra037220.1-P	Field mustard	nucleus	47.2	31.33
CDY66134	Canola	nucleus	47.04	31.09
Zm00001d043480_P001	Maize	plastid	37.5	31.02
CDY51224	Canola	plastid	47.37	30.44
Zm00001d012774_P001	Maize	cytosol, plastid	32.73	29.79
Zm00001d043562_P008	Maize	cytosol	33.39	29.64
Zm00001d037066_P008	Maize	plastid	36.68	29.58
Zm00001d039176_P001	Maize	cytosol, nucleus, plasma membrane	28.12	23.59
Zm00001d011288_P006	Maize	plasma membrane, plastid	27.14	22.06
Zm00001d044405_P003	Maize	mitochondrion, plasma membrane	27.47	21.6

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.22	Gene3D:3.30.200.20	UniProt:A0A1D6F9A6	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	ProteinID:ONM27733.1	PFAM:PF07714	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF138	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00084488EF	EnsemblPlantsGene:Zm00001d007848
EnsemblPlants:Zm00001d007848_P001	EnsemblPlants:Zm00001d007848_T001	SEG:seg	:	:	:

Description

Proline-rich receptor-like protein kinase PERK4

Coordinates

chr2:-:240835870..240838408

Molecular Weight (calculated)

65194.1 Da

IEP (calculated)

9.702

GRAVY (calculated)

-0.461

Length

608 amino acids

Sequence
(BLAST)

001: MRRHSRRRRR CCRDGRARQH SSSSSSSWSS ASFSIQITCM CLQQQTRRDA SIRPSQVISC DDPIPDRPIR TMSSDGPTPS PPSSHAASRR LSTTHSFGSH
101: GKLLPSPGHG ATASQIAVAA AAAALLLAVL AACCCCCCCR RRRRKGDAAQ RQHRPPPHGG MRFYADSSGF KGNTSGYYWP SGARPPQWQT GGQAVTAAIS
201: TMQHGAVLPP PPLPPPPPPP MPADTATFSY EELAAATGGF SEANLLGQGG FGYVHRGVLP GPGGRVKEVA VKQLKAGSGQ GEREFQAEVD TISRVQHRHL
301: VALVGYCIDG ARRLLVYEFV PNQTLEHHLH GKGLPVMGWA TRLRIALGAA KGLAYLHEEC DPRIIHRDIK SANILLDNDF EAMVADFGLA KLTNVNHTHV
401: STRVMGTFGY LAPEYASSGK LTEKSDVFSY GVMLLELLTG RRPGDRSSYG QDGLVDWARQ ALPRALADGN YDALVDPRLR GDYDPTEAAR VVASAAASVR
501: HAARRRPKMS QIVLALQGGM PLEDLSDGAP PGRGASFGPG SGSLSGSDDG GSGSSYTAQM ERIRRAAQPS PDYSTDYPVS IPEFGHPSPA SSASSVERDD
601: RRHRGGRR

Best Arabidopsis Sequence Match ( AT2G18470.1 )
(BLAST)

001: MASSPESAPP TNSTSSPSPP SNTNSTTSSP PAPSPPSPTP PQGDSSSSPP PDSTSPPAPQ APNPPNSSNN SPSPPSQGGG GERGNGGNNG GNDTPPSRGS
101: PPSPPSRSNG DNGGSRSSPP GDTGGSRSDN PPSSGGSSGG GGGGRSNTNT AIIVGVLVGA GLLMIVLIIV CLRRKKKRKD SFYPEPMKGN QYQYYGNNNN
201: NNASQNYPNW HLNSQGQNQQ STGGWGGGGP SPPPPPRMPT SGEDSSMYSG PSRPVLPPPS PALALGFNKS TFTYQELAAA TGGFTDANLL GQGGFGYVHK
301: GVLPSGKEVA VKSLKAGSGQ GEREFQAEVD IISRVHHRYL VSLVGYCIAD GQRMLVYEFV PNKTLEYHLH GKNLPVMEFS TRLRIALGAA KGLAYLHEDC
401: HPRIIHRDIK SANILLDFNF DAMVADFGLA KLTSDNNTHV STRVMGTFGY LAPEYASSGK LTEKSDVFSY GVMLLELITG KRPVDNSITM DDTLVDWARP
501: LMARALEDGN FNELADARLE GNYNPQEMAR MVTCAAASIR HSGRKRPKMS QIVRALEGEV SLDALNEGVK PGHSNVYGSL GASSDYSQTS YNADMKKFRQ
601: IALSSQEFPV SDCEGTSSND SRDMGTKSPT PPK

Arabidopsis Description

PERK4Proline-rich receptor-like protein kinase PERK4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZNQ8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.