CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 3
plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra034626.1-P	Field mustard	cytosol, nucleus, plastid	58.28	99.74
CDX76282	Canola	nucleus, plastid	98.04	98.49
CDX75434	Canola	nucleus, plastid	83.28	82.29
AT4G34440.1	Thale cress	plastid	79.52	78.81
CDX69059	Canola	endoplasmic reticulum, plasma membrane	80.57	74.93
CDX92276	Canola	plasma membrane	47.44	65.62
VIT_03s0063g02440.t01	Wine grape	plastid	40.51	63.59
CDX75275	Canola	cytosol	32.83	61.93
GSMUA_Achr7P26790_001	Banana	plastid	39.01	59.4
CDX95494	Canola	nucleus, plastid	58.89	57.0
CDY18547	Canola	nucleus, plastid	58.58	56.79
CDY61983	Canola	cytosol, plastid	58.28	55.52
CDX99312	Canola	nucleus, plastid	53.77	54.5
GSMUA_Achr4P10790_001	Banana	plastid	52.26	54.47
CDY48859	Canola	nucleus, plastid	56.02	54.31
CDX82325	Canola	cytosol, plastid	58.13	54.14
CDY48084	Canola	nucleus, plastid	55.42	53.64
GSMUA_Achr5P02090_001	Banana	nucleus	47.29	53.4
Zm00001d028337_P003	Maize	nucleus	46.39	52.83
CDY02546	Canola	plastid	40.51	52.44
KRH60853	Soybean	cytosol, plastid	50.9	52.4
GSMUA_Achr4P32080_001	Banana	plastid	48.49	52.27
Zm00001d030218_P003	Maize	plastid	43.67	52.06
CDY47531	Canola	plastid	40.36	51.84
CDY65603	Canola	plastid	48.19	51.78
KXG39820	Sorghum	plastid	44.43	51.57
GSMUA_Achr7P00830_001	Banana	plastid	47.59	51.47
CDY39543	Canola	plastid	50.15	51.31
EER91832	Sorghum	plastid	42.77	50.99
CDX77417	Canola	plastid	49.85	50.92
HORVU0Hr1G013830.4	Barley	plastid	43.22	50.71
CDY71995	Canola	nucleus, plastid	32.68	50.7
CDY59546	Canola	plastid	32.83	50.0
TraesCS5A01G411300.1	Wheat	plastid	43.07	49.91
Zm00001d034257_P002	Maize	plastid	43.98	49.83
GSMUA_Achr4P03200_001	Banana	mitochondrion, plasma membrane	50.9	49.78
EER90803	Sorghum	plastid	44.88	49.42
HORVU2Hr1G061030.8	Barley	plastid	39.16	48.78
Os10t0104800-01	Rice	plastid	40.81	47.71
TraesCS4B01G233600.1	Wheat	nucleus, plastid	44.28	47.57
TraesCS4A01G077500.1	Wheat	nucleus	44.43	47.5
Os07t0137800-00	Rice	plasma membrane	38.1	47.03
TraesCS5B01G415000.1	Wheat	plastid	43.37	46.98
Solyc10g051330.1.1	Tomato	nucleus	41.27	45.67
PGSC0003DMT400062758	Potato	nucleus	48.95	45.39
EER97954	Sorghum	plastid	38.86	45.1
Solyc11g044460.1.1	Tomato	nucleus	48.64	44.13
CDY48706	Canola	cytosol	34.94	43.94
PGSC0003DMT400001868	Potato	nucleus, plastid	45.03	43.84
Solyc01g109530.2.1	Tomato	nucleus	45.03	42.84
Zm00001d007848_P001	Maize	mitochondrion, plastid	39.16	42.76
CDY01653	Canola	plastid	40.36	40.79
CDY41442	Canola	plastid	40.06	40.36
CDX74517	Canola	plastid	40.36	40.36
CDY03749	Canola	plastid	40.66	40.18
CDX68882	Canola	plastid	42.32	39.97
CDX91719	Canola	plastid	40.06	39.47
CDY09439	Canola	plastid	40.36	39.24
CDY44156	Canola	nucleus	40.51	37.78
CDY04245	Canola	plastid	38.25	37.41
CDY59350	Canola	plastid	37.35	37.41
CDY07370	Canola	plastid	37.5	37.39
CDY51639	Canola	nucleus	38.7	36.61
CDY11592	Canola	plastid	40.06	36.19
CDX93398	Canola	cytosol	38.4	35.66
CDY47133	Canola	cytosol, plastid	40.36	35.64
CDX95997	Canola	plastid	39.16	35.42
CDY20960	Canola	cytosol	38.55	35.16
CDY37963	Canola	cytosol	38.1	35.09
CDY20615	Canola	cytosol	38.4	35.08
CDY66134	Canola	nucleus	48.19	34.78
HORVU4Hr1G065270.7	Barley	cytosol	25.45	34.35
CDY51224	Canola	plastid	48.8	34.25
CDY16146	Canola	plastid	40.66	32.26
CDY38610	Canola	plastid	39.91	30.08
CDY46900	Canola	plasma membrane	32.98	29.63
CDX75728	Canola	cytosol	26.05	28.83
CDY10586	Canola	cytosol, nucleus, plasma membrane	25.45	27.98
CDY02454	Canola	cytosol, nucleus, plasma membrane	25.3	27.81
CDX82522	Canola	cytosol	26.81	27.09
CDY20711	Canola	cytosol, plasma membrane, plastid	26.66	26.74
CDY32758	Canola	plasma membrane	26.51	26.47
CDY51732	Canola	cytosol	27.71	24.47
CDY55134	Canola	cytosol	27.71	24.47
CDY23630	Canola	cytosol	27.26	24.43
CDX97507	Canola	cytosol, mitochondrion, nucleus	27.26	24.23
CDY32884	Canola	plasma membrane	22.44	24.11
CDY32921	Canola	plasma membrane	23.34	20.67
CDY32757	Canola	plasma membrane	19.28	18.05
CDY48704	Canola	cytosol, mitochondrion, plasma membrane, plastid	10.09	17.27

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.22	Gene3D:3.30.200.20	GO:A0A078IA95	UniProt:A0A078IA95	EnsemblPlants:CDY46249
ProteinID:CDY46249	ProteinID:CDY46249.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00083588001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF07714	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF285
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
TMHMM:TMhelix	UniParc:UPI0004EEA2AB	SEG:seg	:	:	:

Description

BnaC03g66100DBnaC03g66100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IA95]

Coordinates

chrLK032656:-:43127..47054

Molecular Weight (calculated)

71159.6 Da

IEP (calculated)

6.422

GRAVY (calculated)

-0.692

Length

664 amino acids

Sequence
(BLAST)

001: MADSPENSPP APETPNAGSL SNDTSPPTSP ASSPPSPDSA PPPTPTASSP PPAPPTQETS PPPSLPTSPP AVPNPPPQTQ ENPSPPSPQI SSPVTPPAPP
101: QAPSKQSPPS QRSSPPSPVA NDDRNRINSN NREGSTPSPP SGTSENDDRN RINSNNREGS TPSPPSGNRR SSDGGSPSPP RSISPPRNSG DSDTSSPPGE
201: QPHQANLGLI IGVIVGAGLL LLLLMFICIC CYKKKKEKRA PQVNHMHYYN NNTPFGVPNG NGGYYNNGTP QDHVVNMDHS DSSNLAGPTA PSPPAATLGH
301: NQSTFTYDEL SIATEGFSQS NLLGQGGFGY VHKGVLPSGK EVAVKSLKLG SGQGEREFQA EVEIISRVHH RHLVSLVGYC ISGGQRLLVY EFLPNNTLEF
401: HLHGKGRPVL DWHVRVKIAL GSARGLAYLH EDCHPRIIHR DIKAANILLD FSFETQVADF GLAKLSQDNY THVSTRVMGT FGYLAPEYAS SGKLSDKSDV
501: FSFGVMLLEL ITGRPPVDLT GEMEDSLVDW ARPLCSKAAQ DGDYSQLADP RLETNYDQQE MARMASCAAA AIRHSARRRP KMSQIVRALE GDMSIEDLSE
601: GGRAAQNTYL SPGTGSSEYD TRSYSADMKK FRKLALESKE YQTGEYGLNP SASSSEEMKR NPQF

Best Arabidopsis Sequence Match ( AT4G34440.2 )
(BLAST)

001: MADSPVDSSP APETSNGTPP SNGTSPSNES SPPTPPSSPP PSSISAPPPD ISASFSPPPA PPTQETSPPT SPSSSPPVVA NPSPQTPENP SPPAPEGSTP
101: VTPPAPPQTP SNQSPERPTP PSPGANDDRN RTNGGNNNRD GSTPSPPSSG NRTSGDGGSP SPPRSISPPQ NSGDSDSSSG NHPQANIGLI IGVLVGAGLL
201: LLLAVCICIC CNRKKKKKSP QVNHMHYYNN NPYGGAPSGN GGYYKGTPQD HVVNMAGQGG GNWGPQQPVS GPHSDASNLT GRTAIPSPQA ATLGHNQSTF
301: TYDELSIATE GFAQSNLLGQ GGFGYVHKGV LPSGKEVAVK SLKLGSGQGE REFQAEVDII SRVHHRHLVS LVGYCISGGQ RLLVYEFIPN NTLEFHLHGK
401: GRPVLDWPTR VKIALGSARG LAYLHEDCHP RIIHRDIKAA NILLDFSFET KVADFGLAKL SQDNYTHVST RVMGTFGYLA PEYASSGKLS DKSDVFSFGV
501: MLLELITGRP PLDLTGEMED SLVDWARPLC LKAAQDGDYN QLADPRLELN YSHQEMVQMA SCAAAAIRHS ARRRPKMSQI VRALEGDMSM DDLSEGTRPG
601: QSTYLSPGSV SSEYDASSYT ADMKKFKKLA LENKEYQSSE YGGTSEYGLN PSASSSEEMN RGSMKRNPQL

Arabidopsis Description

PERK5PERK5 [Source:UniProtKB/TrEMBL;Acc:A0A178V2W8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.