CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93398	Canola	cytosol	95.84	96.64
AT1G10620.1	Thale cress	cytosol	82.66	83.01
CDY20615	Canola	cytosol	82.39	81.71
CDY20960	Canola	cytosol	81.97	81.18
CDX75275	Canola	cytosol	26.77	54.83
CDY41442	Canola	plastid	47.02	51.44
CDY03749	Canola	plastid	47.71	51.19
CDX91719	Canola	plastid	47.43	50.74
CDY09439	Canola	plastid	47.16	49.78
VIT_01s0127g00670.t01	Wine grape	plastid	45.08	48.36
CDY44156	Canola	nucleus	47.3	47.89
GSMUA_Achr6P27340_001	Banana	cytosol, endoplasmic reticulum, plastid	34.67	47.89
KRG99346	Soybean	plastid	41.05	47.59
CDY51639	Canola	nucleus	44.94	46.15
CDY11592	Canola	plastid	47.02	46.12
KRH74591	Soybean	nucleus, plastid	43.41	45.63
KRH69571	Soybean	nucleus, plastid	42.86	45.44
CDX92276	Canola	plasma membrane	30.24	45.42
CDY47133	Canola	cytosol, plastid	46.74	44.81
CDY01653	Canola	plastid	40.5	44.44
CDX74517	Canola	plastid	40.78	44.28
GSMUA_Achr1P13940_001	Banana	plastid	42.86	43.77
KRH45666	Soybean	cytosol, nucleus, plastid	43.13	43.31
Os03t0568800-01	Rice	cytosol, nucleus, plastid	40.36	43.11
CDY02546	Canola	plastid	30.51	42.88
KXG32962	Sorghum	plastid	41.33	42.63
CDY47531	Canola	plastid	30.37	42.36
HORVU3Hr1G057190.2	Barley	plastid	40.64	42.16
Zm00001d011450_P001	Maize	plastid	39.81	42.02
CDY04245	Canola	plastid	39.53	41.97
TraesCS3B01G259100.1	Wheat	cytosol, plastid	40.36	41.69
CDY07370	Canola	plastid	38.42	41.59
CDY59350	Canola	plastid	37.73	41.03
CDY39543	Canola	plastid	36.89	40.99
Os06t0486000-01	Rice	plasma membrane	42.16	40.64
CDX77417	Canola	plastid	36.34	40.31
TraesCS3A01G229800.1	Wheat	plastid	39.94	40.0
CDY65603	Canola	plastid	34.12	39.81
CDX95997	Canola	plastid	39.81	39.1
TraesCS7D01G232700.1	Wheat	nucleus, plastid	40.22	38.62
CDY71995	Canola	nucleus, plastid	22.88	38.55
CDY59546	Canola	plastid	23.3	38.53
TraesCS7B01G131000.1	Wheat	nucleus, plastid	40.08	38.38
CDX76282	Canola	nucleus, plastid	34.95	38.12
CDY46249	Canola	nucleus, plastid	35.09	38.1
CDX75434	Canola	nucleus, plastid	34.81	37.35
CDX95494	Canola	nucleus, plastid	35.51	37.32
CDY48706	Canola	cytosol	27.32	37.31
CDY18547	Canola	nucleus, plastid	35.09	36.93
CDY48084	Canola	nucleus, plastid	35.09	36.88
CDY48859	Canola	nucleus, plastid	34.95	36.79
Zm00001d037066_P008	Maize	plastid	38.14	36.47
CDY16146	Canola	plastid	41.89	36.08
CDY61983	Canola	cytosol, plastid	34.81	36.01
CDX99312	Canola	nucleus, plastid	32.59	35.88
CDX82325	Canola	cytosol, plastid	34.95	35.34
CDX69059	Canola	endoplasmic reticulum, plasma membrane	34.54	34.87
CDX68882	Canola	plastid	33.98	34.85
CDY38610	Canola	plastid	40.92	33.48
CDX75728	Canola	cytosol	23.16	27.83
CDY10586	Canola	cytosol, nucleus, plasma membrane	23.16	27.65
CDY02454	Canola	cytosol, nucleus, plasma membrane	22.88	27.32
CDY32758	Canola	plasma membrane	24.41	26.47
CDY66134	Canola	nucleus	33.7	26.41
HORVU7Hr1G047750.6	Barley	plastid	28.85	26.4
CDY46900	Canola	plasma membrane	26.77	26.12
CDY51224	Canola	plastid	34.12	26.0
CDY20711	Canola	cytosol, plasma membrane, plastid	23.72	25.83
CDX82522	Canola	cytosol	23.44	25.72
CDY32884	Canola	plasma membrane	20.8	24.27
CDY23630	Canola	cytosol	24.13	23.48
CDY51732	Canola	cytosol	24.13	23.14
CDY55134	Canola	cytosol	24.13	23.14
CDX97507	Canola	cytosol, mitochondrion, nucleus	23.86	23.03
CDY32921	Canola	plasma membrane	21.78	20.93
CDY32757	Canola	plasma membrane	17.34	17.63
CDY48704	Canola	cytosol, mitochondrion, plasma membrane, plastid	7.63	14.18

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.22	Gene3D:3.30.200.20	GO:A0A078HM98	UniProt:A0A078HM98	EnsemblPlants:CDY37963
ProteinID:CDY37963	ProteinID:CDY37963.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00064998001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF07714	PRINTS:PR01217	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF36	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI0004EF0816	SEG:seg	:	:

Description

BnaC05g08110DBnaC05g08110D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HM98]

Coordinates

chrLK032413:+:60836..63890

Molecular Weight (calculated)

77700.0 Da

IEP (calculated)

6.800

GRAVY (calculated)

-0.557

Length

721 amino acids

Sequence
(BLAST)

001: MDKVQEQADF IGKKIAPFVT SHQPNLAGFT DQKILGGSQT TQPPATSPPS PPSPDSGGGG SQSSPPPVTV SPPPSNQPPI TTPPPKPPSS PPPSITPPPS
101: PPQPQPPPQS TPSGDSPVVI PSPKPELPLP ALPPPSLVTQ QPEARPNVNG QELPNNPTSP PSPPLNPLSP PSGSQGSPSF SSTSPPVISL NPNLPRNPSQ
201: PLDSPPAEGS NHVPSSSSVP SPPSLSGSDN NSGGSNRQNA NSNGNGGNGQ QNNEPNFTEK TLISIGIAGV LVIIIIAVIF FFRRKQKKSS SPRSNQQYLP
301: PANVSVHTEG LIHYRQNPGN GTSSAQNSSP DTNNSLGNPK PGRTTPDSAV IGTSKIPFTF EELSEITEGF SKRFVIGEGG FGCVFKGILS EGKPIAIKQL
401: KSISAEGYRE FKAEVEIISR VHHRHLVSLV GYCICEQHRF LIYEFVPNNT LDYHLHGKDL PVLEWTRRVK IAIGAAKGLA YLHEDCHPKI IHRDIKSSNI
501: LLDDEFEAQA NYVQVADFGL ARLNDTAQSH ISTRVMGTFG YLAPEYASSG KLTDRSDVFS FGVVLLELIT GRKPVDTSQP LGEESLVEWA RPRLIEAIEK
601: GDISEVVDPR LEKHYIEEEV YRMIETAASC VRHSALKRPR MVQVVRALDT RDNLSDLSNG VKVGQSTVYN SGQYSNEIRM FRRASEDSSD LGTSNGYYTS
701: QDFTSRELES RAFNTSHQAN H

Best Arabidopsis Sequence Match ( AT1G10620.1 )
(BLAST)

001: MDKVQQQADL FGKTISPFVA SQPTNVGGFT DQKIIGGSET TQPPATSPPS PPSPDTQTSP PPATAAQPPP NQPPNTTPPP TPPSSPPPSI TPPPSPPQPQ
101: PPPQSTPTGD SPVVIPFPKP QLPPPSLFPP PSLVNQLPDP RPNDNNILEP INNPISLPSP PSTPFSPPSQ ENSGSQGSPP LSSLLPPMLP LNPNSPGNPL
201: QPLDSPLGGE SNRVPSSSSS PSPPSLSGSN NHSGGSNRHN ANSNGDGGTS QQSNESNYTE KTVIGIGIAG VLVILFIAGV FFVRRKQKKG SSSPRSNQYL
301: PPANVSVNTE GFIHYRQKPG NGNSSAQNSS PDTNSLGNPK HGRGTPDSAV IGTSKIHFTY EELSQITEGF CKSFVVGEGG FGCVYKGILF EGKPVAIKQL
401: KSVSAEGYRE FKAEVEIISR VHHRHLVSLV GYCISEQHRF LIYEFVPNNT LDYHLHGKNL PVLEWSRRVR IAIGAAKGLA YLHEDCHPKI IHRDIKSSNI
501: LLDDEFEAQV ADFGLARLND TAQSHISTRV MGTFGYLAPE YASSGKLTDR SDVFSFGVVL LELITGRKPV DTSQPLGEES LVEWARPRLI EAIEKGDISE
601: VVDPRLENDY VESEVYKMIE TAASCVRHSA LKRPRMVQVV RALDTRDDLS DLTNGVKVGQ SRVYDSGQYS NEIRIFRRAS EDSSDLGTNT GYYPSQDYAT
701: SHEYESESRA FNTSHRNH

Arabidopsis Description

PERK11PERK11 [Source:UniProtKB/TrEMBL;Acc:A0A178W8M0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.