Factsheet for VIT_01s0127g00670.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 3
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G70450.1	Thale cress	cytosol	36.46	62.18
VIT_14s0083g00330.t01	Wine grape	plasma membrane	39.14	60.32
CDY41442	Canola	plastid	55.36	56.45
Bra016342.1-P	Field mustard	plastid	55.06	56.15
VIT_03s0063g02440.t01	Wine grape	plastid	35.27	56.03
CDX91719	Canola	plastid	56.1	55.93
Bra007915.1-P	Field mustard	cytosol, plastid	55.8	55.64
CDY03749	Canola	plastid	55.06	55.06
CDY09439	Canola	plastid	55.65	54.76
Bra024608.1-P	Field mustard	nucleus	56.7	54.66
CDY44156	Canola	nucleus	56.7	53.51
AT1G70460.1	Thale cress	plastid	56.4	53.38
AT1G23540.1	Thale cress	nucleus, plastid	56.1	52.36
CDY51639	Canola	nucleus	54.46	52.14
KRG99346	Soybean	plastid	47.32	51.13
VIT_04s0023g01570.t01	Wine grape	nucleus	34.23	50.88
Bra016218.1-P	Field mustard	cytosol, plastid	55.95	50.07
GSMUA_Achr6P27340_001	Banana	cytosol, endoplasmic reticulum, plastid	38.84	50.0
CDY11592	Canola	plastid	54.17	49.52
CDY47133	Canola	cytosol, plastid	54.91	49.07
KRH74591	Soybean	nucleus, plastid	49.26	48.25
KRH69571	Soybean	nucleus, plastid	48.21	47.65
AT1G10620.1	Thale cress	cytosol	49.7	46.52
HORVU3Hr1G057190.2	Barley	plastid	48.07	46.47
GSMUA_Achr1P13940_001	Banana	plastid	48.21	45.89
VIT_11s0016g03880.t01	Wine grape	plastid	44.35	45.85
KRH45666	Soybean	cytosol, nucleus, plastid	48.96	45.82
Os03t0568800-01	Rice	cytosol, nucleus, plastid	45.83	45.63
CDX93398	Canola	cytosol	48.51	45.59
VIT_01s0011g02460.t01	Wine grape	plastid	48.96	45.32
Bra019913.1-P	Field mustard	cytosol, plastid	48.21	45.31
TraesCS3B01G259100.1	Wheat	cytosol, plastid	47.02	45.27
Zm00001d011450_P001	Maize	plastid	45.98	45.24
CDY37963	Canola	cytosol	48.36	45.08
TraesCS3A01G229800.1	Wheat	plastid	47.62	44.44
CDY20960	Canola	cytosol	47.92	44.23
VIT_09s0002g04210.t01	Wine grape	plastid	36.16	44.1
KXG32962	Sorghum	plastid	45.83	44.06
CDY20615	Canola	cytosol	47.62	44.02
VIT_01s0127g00890.t01	Wine grape	mitochondrion	17.11	43.4
Bra018431.1-P	Field mustard	cytosol	44.79	42.33
Os06t0486000-01	Rice	plasma membrane	47.02	42.25
TraesCS7D01G232700.1	Wheat	nucleus, plastid	44.35	39.68
TraesCS7B01G131000.1	Wheat	nucleus, plastid	44.35	39.58
Zm00001d037066_P008	Maize	plastid	43.6	38.86
VIT_13s0067g01620.t01	Wine grape	cytosol, plastid	20.54	35.2
HORVU7Hr1G047750.6	Barley	plastid	32.89	28.05
VIT_09s0002g02420.t01	Wine grape	cytosol	27.08	24.36
VIT_11s0016g02430.t01	Wine grape	plasma membrane	26.64	23.77
VIT_18s0001g11590.t01	Wine grape	cytosol	23.36	21.72
VIT_18s0001g14990.t01	Wine grape	cytosol, nucleus, peroxisome	21.28	18.29

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.22	Gene3D:3.30.200.20	ProteinID:CBI28529.3	UniProt:D7TDF6	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004675	GO:GO:0004871
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF07714
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF36	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix
UniParc:UPI0001BE3101	ArrayExpress:VIT_01s0127g00670	EnsemblPlantsGene:VIT_01s0127g00670	EnsemblPlants:VIT_01s0127g00670.t01	SEG:seg	:

Description

Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:D7TDF6]

Coordinates

chr1:-:8004150..8007827

Molecular Weight (calculated)

68105.4 Da

IEP (calculated)

6.334

GRAVY (calculated)

-0.624

Length

672 amino acids

Sequence
(BLAST)

001: MSDSAESPGS LPESPPEDSS SPPPKSSTSP PPPPDDDSPS APPPTSKTSP PPPSDSSPPP DSNTSPPSPP PPKSESPPPT PPPPSPSPPP PPPPPPSSGS
101: GPPKPPPPSH SNSSPPPPPT SPPPAXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXT TSHVPPPPPS DRVPSSSTPS PTSSPEKSSQ SSGSGSGSST
201: SSQTGPVVGV TVAGVVILAL VAIFFVVSRR KKKHSGVIPA KYNPPTASYS VKSNGHYYGQ QPMGMSAPYG SQHSLSQHGN GNNYGSQRGQ MYYPGGPESG
301: VIGGAKSFFT YEELMEITNG FSRQNIIGEG GFGYVYKGWL PDGRVVAVKQ LKAGSGQGER EFRAEVEIIS RVHHRHLVSL VGYSIAENQR LLLYEFLPNK
401: TLEHHLHGKE LPVLDWTKRL KIAIGSARGL AYLHEDCNPK IIHRDIKSAN ILLDDDFEAQ VADFGLAKPS NDNNTHVSTR VMGTFGYMAP EYASSGKLTD
501: RSDVFSFGVV LLELITGRKP VDPTQPLGDE SLVEWARPLL IHALETGDVS ELIDPRLEHR YVESEMLRMI ETAAACVRHS APKRPRMAKV VRALDSEGES
601: TDLTNGVKYG QSTIYDSGQY NQDIQRFRRM ALGDDSSEYD MYSGEYQSKE VSLGAPTSST LTESETQAMN GK

Best Arabidopsis Sequence Match ( AT1G70460.1 )
(BLAST)

001: MSDSPTSSPP APSADSAPPP DTSSDGSAAP PPTDSAPPPS PPADSSPPPA LPSLPPAVFS PPPTVSSPPP PPLDSSPPPP PDLTPPPSSP PPPDAPPPIP
101: IVFPPPIDSP PPESTNSPPP PEVFEPPPPP ADEDESPPAP PPPEQLPPPA SSPQGGPKKP KKHHPGPATS PPAPSAPATS PPAPPNAPPR NSSHALPPKS
201: TAAGGPLTSP SRGVPSSGNS VPPPANSGGG YQGKTMAGFA IAGFAVIALM AVVFLVRRKK KRNIDAYSDS QYLPPSNFSI KSDGFLYGQN PTKGYSGPGG
301: YNSQQQSNSG NSFGSQRGGG GYTRSGSAPD SAVMGSGQTH FTYEELTDIT EGFSKHNILG EGGFGCVYKG KLNDGKLVAV KQLKVGSGQG DREFKAEVEI
401: ISRVHHRHLV SLVGYCIADS ERLLIYEYVP NQTLEHHLHG KGRPVLEWAR RVRIAIGSAK GLAYLHEDCH PKIIHRDIKS ANILLDDEFE AQVADFGLAK
501: LNDSTQTHVS TRVMGTFGYL APEYAQSGKL TDRSDVFSFG VVLLELITGR KPVDQYQPLG EESLVEWARP LLHKAIETGD FSELVDRRLE KHYVENEVFR
601: MIETAAACVR HSGPKRPRMV QVVRALDSEG DMGDISNGNK VGQSSAYDSG QYNNDTMKFR KMAFGFDDSS DSGMYSGDYS VQDSRKGSNG ASSEFTRNET
701: ENRNFNNRRY

Arabidopsis Description

PERK13RHS10 [Source:UniProtKB/TrEMBL;Acc:A0A178WB53]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.