Factsheet for VIT_11s0016g03880.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P06880_001	Banana	plastid	51.38	80.68
GSMUA_Achr8P19800_001	Banana	cytosol	47.54	75.0
VIT_03s0063g02440.t01	Wine grape	plastid	48.31	74.23
GSMUA_Achr10P...	Banana	plastid	55.54	73.67
KRH48383	Soybean	mitochondrion	75.23	72.88
KRH39292	Soybean	plastid	74.15	72.59
GSMUA_Achr7P14360_001	Banana	plastid	57.38	68.82
PGSC0003DMT400001024	Potato	plastid	72.77	67.86
EES19240	Sorghum	cytosol, plasma membrane, plastid	60.62	67.7
HORVU1Hr1G030140.2	Barley	plastid	63.23	67.49
Solyc12g007110.1.1	Tomato	nucleus	70.92	67.3
TraesCS1D01G126300.1	Wheat	plastid	66.77	66.46
TraesCS1A01G127900.1	Wheat	plastid	66.77	65.96
TraesCS1B01G147000.2	Wheat	plastid	61.85	65.15
VIT_04s0023g01570.t01	Wine grape	nucleus	44.77	64.38
Os05t0218400-01	Rice	plasma membrane	66.77	64.3
Zm00001d010421_P002	Maize	plasma membrane	66.15	63.33
Os01t0227200-01	Rice	plasma membrane	57.38	62.48
VIT_09s0002g04210.t01	Wine grape	plastid	52.46	61.89
OQU86081	Sorghum	plastid	58.77	61.61
TraesCS3B01G179300.1	Wheat	plastid	59.08	60.86
TraesCS3D01G160000.1	Wheat	plastid	58.92	60.6
GSMUA_Achr10P...	Banana	cytosol	55.85	60.5
Zm00001d039311_P001	Maize	mitochondrion	57.69	60.48
HORVU3Hr1G030900.1	Barley	plastid	58.46	60.41
TraesCS3A01G152200.1	Wheat	plastid	58.31	60.16
Zm00001d037811_P001	Maize	plasma membrane	44.77	58.79
VIT_14s0083g00330.t01	Wine grape	plasma membrane	38.46	57.34
VIT_01s0127g00890.t01	Wine grape	mitochondrion	18.46	45.28
VIT_01s0127g00670.t01	Wine grape	plastid	45.85	44.35
VIT_01s0011g02460.t01	Wine grape	plastid	46.46	41.6
VIT_13s0067g01620.t01	Wine grape	cytosol, plastid	21.38	35.46
VIT_09s0002g02420.t01	Wine grape	cytosol	31.08	27.04
VIT_11s0016g02430.t01	Wine grape	plasma membrane	28.77	24.83
VIT_18s0001g11590.t01	Wine grape	cytosol	26.92	24.2
VIT_18s0001g14990.t01	Wine grape	cytosol, nucleus, peroxisome	21.85	18.16

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100247489	wikigene:100247489	MapMan:18.4.1.22	Gene3D:3.30.200.20	ProteinID:CBI28068
ProteinID:CBI28068.3	UniProt:D7TBN3	EMBL:FN595756	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
GO:GO:0038023	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100247489	wikigene:LOC100247489	PFAM:PF07714
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF89	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TIGR:TC64242
TMHMM:TMhelix	UniParc:UPI0001BE3144	ArrayExpress:VIT_11s0016g03880	EnsemblPlantsGene:VIT_11s0016g03880	EnsemblPlants:VIT_11s0016g03880.t01	unigene:Vvi.10365
RefSeq:XP_002284430	RefSeq:XP_002284430.2	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr11:-:3163900..3169609

Molecular Weight (calculated)

68984.1 Da

IEP (calculated)

8.834

GRAVY (calculated)

-0.603

Length

650 amino acids

Sequence
(BLAST)

001: MSSPSPGQSP GPTSPPSTNT TSPPPPSTNT TAPPPATPAA PPPSSPSPPP PTAPTGSPPT APAGSPPPPP DSPGSPPPSG QTGSPPPPSR ASPPPPPSSP
101: SSNKSPPPPP SDSKSPPPPP SSPSSNTVST GLVVGIAIGG VVILVVLSLL FICCKKKKRR DHRQDYYVPP PPGPKNDPYG GPPQQWQHNV PPPADHAVTV
201: FPKPSPPPGT ASRPPHSPVQ VPTPPPPPQP PFVSSSGGSG SNYSGSDNPL PPPSPSIALG FSKSTFTYEE LVMATDGFSN ANLLGQGGFG YVHRGVLPNG
301: KEVAVKQLKA GSGQGEREFQ AEVEIISRVH HKHLVTLAGY CITGSHRLLV YEFVPNNTLE FHLHGKGRPT MDWSTRLKIA LGSAKGLAYL HEDCHPKIIH
401: RDIKAANILL DFKFEAKVAD FGLAKFSSDA NTHVSTRVMG TFGYLAPEYA ASGKLSDKSD VFSFGVMLLE LLTGRRPVDA NQTFMEDSLV DWARPLLTRA
501: LEDGNFDTLV DPRLQKDYNH HEMARMVACA AACVRHSARR RPRMSQIVRA LEGDASLSDL NEGMRPGQSS IYSSHGSSDY DTNQYNEDMI KFRKMALASR
601: DYGSSEYSGP TSEYGLYPSG SSSEGQRTTR EMEMGKMKKD SRGYSGGSEK

Best Arabidopsis Sequence Match ( AT3G24550.1 )
(BLAST)

001: MSTAPSPGTT PSPSPPSPPT NSTTTTPPPA ASSPPPTTTP SSPPPSPSTN STSPPPSSPL PPSLPPPSPP GSLTPPLPQP SPSAPITPSP PSPTTPSNPR
101: SPPSPNQGPP NTPSGSTPRT PSNTKPSPPS DSSDGLSTGV VVGIAIGGVA ILVILTLICL LCKKKRRRRH DDEAAYYVPP PPPSGPKAGG PYGGQQQYWQ
201: QQNASRPSDN HVVTSLPPPK PPSPPRKPPP PPPPPAFMSS SGGSDYSDLP VLPPPSPGLV LGFSKSTFTY EELSRATNGF SEANLLGQGG FGYVHKGILP
301: SGKEVAVKQL KAGSGQGERE FQAEVEIISR VHHRHLVSLI GYCMAGVQRL LVYEFVPNNN LEFHLHGKGR PTMEWSTRLK IALGSAKGLS YLHEDCNPKI
401: IHRDIKASNI LIDFKFEAKV ADFGLAKIAS DTNTHVSTRV MGTFGYLAPE YAASGKLTEK SDVFSFGVVL LELITGRRPV DANNVYVDDS LVDWARPLLN
501: RASEEGDFEG LADSKMGNEY DREEMARMVA CAAACVRHSA RRRPRMSQIV RALEGNVSLS DLNEGMRPGH SNVYSSYGGS TDYDTSQYND DMIKFRKMAL
601: GTQEYGTTGE YSNPTSDYGL YPSGSSSEGQ ATREMEMGKI KKTGQGYSGP SL

Arabidopsis Description

PERK1Proline-rich receptor-like protein kinase PERK1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LV48]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.