Factsheet for VIT_14s0083g00330.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
plastid 2
plasma membrane 7
extracellular 4
endoplasmic reticulum 4
vacuole 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_19s0015g00430.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G38560.1	VIT_19s0015g00430.t01	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g089750.2.1	Tomato	cytosol	33.26	82.86
Os05t0100700-02	Rice	plasma membrane	47.02	77.95
TraesCS1B01G001500.1	Wheat	plastid	56.19	68.25
GSMUA_Achr8P29720_001	Banana	mitochondrion	62.39	68.17
TraesCS3D01G005400.1	Wheat	cytosol	61.24	66.58
GSMUA_Achr1P25240_001	Banana	mitochondrion	62.61	56.99
VIT_03s0063g02440.t01	Wine grape	plastid	54.36	56.03
VIT_04s0023g01570.t01	Wine grape	nucleus	52.29	50.44
KRH45181	Soybean	plastid	80.96	48.76
PGSC0003DMT400026193	Potato	plastid	75.92	48.53
Zm00001d035774_P001	Maize	plastid	65.83	48.24
KXG20993	Sorghum	plastid	65.6	47.19
VIT_01s0127g00890.t01	Wine grape	mitochondrion	28.67	47.17
KRH01485	Soybean	plastid	81.65	47.09
Bra028192.1-P	Field mustard	plastid	72.25	47.09
CDY01653	Canola	plastid	70.87	47.03
AT5G38560.1	Thale cress	plastid	73.39	46.99
CDX74517	Canola	plastid	70.87	46.54
VIT_01s0011g02460.t01	Wine grape	plastid	76.83	46.14
GSMUA_Achr2P14510_001	Banana	plastid	67.89	45.05
GSMUA_Achr2P09600_001	Banana	plastid	66.97	44.44
GSMUA_Achr4P24400_001	Banana	plastid	66.28	43.72
TraesCS1D01G004300.1	Wheat	plastid	64.91	43.14
HORVU1Hr1G000090.3	Barley	plastid	64.91	42.88
HORVU3Hr1G000770.2	Barley	plastid	66.74	42.48
VIT_09s0002g04210.t01	Wine grape	plastid	53.44	42.29
EES01447	Sorghum	plastid	65.14	42.07
Zm00001d012774_P001	Maize	cytosol, plastid	64.45	42.07
Os01t0738300-01	Rice	cytosol	64.68	42.03
TraesCS3B01G008600.2	Wheat	plastid	66.06	41.98
TraesCS3A01G003900.1	Wheat	plastid	66.06	41.92
KXG32101	Sorghum	plastid	67.2	41.92
Zm00001d040127_P001	Maize	plasma membrane	66.06	41.68
TraesCS3A01G278100.1	Wheat	plastid	64.45	41.63
HORVU3Hr1G070200.1	Barley	plastid	64.45	41.63
TraesCS3D01G278400.1	Wheat	cytosol, plastid	64.45	41.57
TraesCS3B01G312300.1	Wheat	plastid	64.45	41.51
Os01t0110500-01	Rice	plasma membrane	66.28	41.4
GSMUA_Achr10P...	Banana	plastid	67.43	41.0
Zm00001d043562_P008	Maize	cytosol	64.22	40.88
Zm00001d008433_P007	Maize	plastid	67.2	40.14
VIT_01s0127g00670.t01	Wine grape	plastid	60.32	39.14
VIT_11s0016g03880.t01	Wine grape	plastid	57.34	38.46
VIT_13s0067g01620.t01	Wine grape	cytosol, plastid	30.73	34.18
GSMUA_Achr8P13750_001	Banana	cytosol, nucleus, plastid	52.75	26.23
VIT_09s0002g02420.t01	Wine grape	cytosol	44.04	25.7
VIT_11s0016g02430.t01	Wine grape	plasma membrane	39.91	23.11
VIT_18s0001g11590.t01	Wine grape	cytosol	36.93	22.27
VIT_18s0001g14990.t01	Wine grape	cytosol, nucleus, peroxisome	32.11	17.9

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100246425	wikigene:100246425	MapMan:18.4.1.22	Gene3D:3.30.200.20	ProteinID:CBI16871
ProteinID:CBI16871.3	UniProt:D7SMH3	EMBL:FN594955	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	EntrezGene:LOC100246425	wikigene:LOC100246425	PFAM:PF07714	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF132	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI0001BE1161	ArrayExpress:VIT_14s0083g00330
EnsemblPlantsGene:VIT_14s0083g00330	EnsemblPlants:VIT_14s0083g00330.t01	unigene:Vvi.20391	RefSeq:XP_002279468	RefSeq:XP_002279468.1	SEG:seg

Description

No Description!

Coordinates

chr14:-:22377584..22388279

Molecular Weight (calculated)

48148.4 Da

IEP (calculated)

6.755

GRAVY (calculated)

-0.181

Length

436 amino acids

Sequence
(BLAST)

001: MVTIGIVVGL LVLSLLVMAA WFVQKRKKKR AGLNIGYTMP SPFASSQNSD SVFLRPHSSS ALPLGSGSGS DFVYSPPDPV GSNSRPWFSY EELVEATDGF
101: SSQNLLGEGG FGCVYKGFLA DGREVAVKQL KIGGGQGERE FKAEVEIISR VHHRHLVSLV GYCISEHQRL LVYDFVPNDT LHYHLHGEGR PVMDWATRVK
201: VAAGAARGIA YLHEDCHPRI IHRDIKSSNI LLDMNFEAQV SDFGLAKLAL DANTHVTTRV MGTFGYMAPE YASSGKLTEK SDVYSFGVVL LELITGRKPV
301: DASQPLGDES LVEWARPLLA QALDSGNFEG LIDPRLEKNF VENEMFRMIE AAAACVRHSA SKRPRMSLVV RALDSMDELS DLTNGMKPGQ SEVFDSAQHS
401: AQIRMFQRMA FGSQEYSSEF FNQSQSSSRS FSRMPY

Best Arabidopsis Sequence Match ( AT5G38560.1 )
(BLAST)

001: MSLVPPLPIL SPPSSNSSTT APPPLQTQPT TPSAPPPVTP PPSPPQSPPP VVSSSPPPPV VSSPPPSSSP PPSPPVITSP PPTVASSPPP PVVIASPPPS
101: TPATTPPAPP QTVSPPPPPD ASPSPPAPTT TNPPPKPSPS PPGETPSPPG ETPSPPKPSP STPTPTTTTS PPPPPATSAS PPSSNPTDPS TLAPPPTPLP
201: VVPREKPIAK PTGPASNNGN NTLPSSSPGK SEVGTGGIVA IGVIVGLVFL SLFVMGVWFT RKRKRKDPGT FVGYTMPPSA YSSPQGSDVV LFNSRSSAPP
301: KMRSHSGSDY MYASSDSGMV SNQRSWFSYD ELSQVTSGFS EKNLLGEGGF GCVYKGVLSD GREVAVKQLK IGGSQGEREF KAEVEIISRV HHRHLVTLVG
401: YCISEQHRLL VYDYVPNNTL HYHLHAPGRP VMTWETRVRV AAGAARGIAY LHEDCHPRII HRDIKSSNIL LDNSFEALVA DFGLAKIAQE LDLNTHVSTR
501: VMGTFGYMAP EYATSGKLSE KADVYSYGVI LLELITGRKP VDTSQPLGDE SLVEWARPLL GQAIENEEFD ELVDPRLGKN FIPGEMFRMV EAAAACVRHS
601: AAKRPKMSQV VRALDTLEEA TDITNGMRPG QSQVFDSRQQ SAQIRMFQRM AFGSQDYSSD FFDRSQSHSS WGSRDQSRFV P

Arabidopsis Description

PERK8Proline-rich receptor-like protein kinase PERK8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFW5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.