Factsheet for TraesCS3D01G278400.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS4A01G137900.1
TraesCS4B01G148100.1
TraesCS4D01G153300.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G38560.1	TraesCS4A01G137900.1	AT4G26630.1	25387881
AT5G38560.1	TraesCS4B01G148100.1	AT4G26630.1	25387881
AT5G38560.1	TraesCS4D01G153300.1	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G278100.1	Wheat	plastid	97.49	97.63
TraesCS3B01G312300.1	Wheat	plastid	97.34	97.19
HORVU3Hr1G070200.1	Barley	plastid	96.15	96.3
EES01447	Sorghum	plastid	84.17	84.3
Zm00001d012774_P001	Maize	cytosol, plastid	81.36	82.34
Zm00001d043562_P008	Maize	cytosol	82.99	81.9
Os01t0738300-01	Rice	cytosol	80.77	81.37
Solyc02g089750.2.1	Tomato	cytosol	19.82	76.57
GSMUA_Achr8P29720_001	Banana	mitochondrion	39.05	66.17
VIT_14s0083g00330.t01	Wine grape	plasma membrane	41.57	64.45
TraesCS3D01G005400.1	Wheat	cytosol	37.43	63.09
Bra004022.1-P	Field mustard	plastid	36.09	62.72
GSMUA_Achr1P25240_001	Banana	mitochondrion	39.2	55.32
KRH07595	Soybean	plastid	40.68	51.69
PGSC0003DMT400026193	Potato	plastid	50.89	50.44
Bra028192.1-P	Field mustard	plastid	48.22	48.73
CDY04245	Canola	plastid	48.82	48.6
CDX74517	Canola	plastid	47.63	48.49
CDY01653	Canola	plastid	46.89	48.25
VIT_01s0011g02460.t01	Wine grape	plastid	51.63	48.07
CDY07370	Canola	plastid	47.19	47.9
AT5G38560.1	Thale cress	plastid	47.63	47.28
CDY59350	Canola	plastid	45.71	46.61
KRH45181	Soybean	plastid	49.85	46.55
KRH75567	Soybean	plastid	48.67	46.21
KRH71097	Soybean	plastid	50.44	46.08
TraesCS1D01G004300.1	Wheat	plastid	44.67	46.04
AT1G68690.2	Thale cress	plastid	47.78	45.62
KRH01485	Soybean	plastid	50.74	45.37
PGSC0003DMT400064597	Potato	plastid	48.96	44.43
CDX95997	Canola	plastid	47.78	44.01
Solyc05g010140.2.1	Tomato	plastid	48.67	43.87
AT1G26150.1	Thale cress	plastid	48.82	43.31
Solyc01g010030.2.1	Tomato	plastid	46.75	43.29
PGSC0003DMT400019290	Potato	mitochondrion	44.38	43.1
PGSC0003DMT400041343	Potato	plastid	46.75	42.76
TraesCS1D01G339600.1	Wheat	plastid	28.11	42.13
TraesCS3D01G290100.1	Wheat	cytosol	27.07	41.78
TraesCS3D01G160000.1	Wheat	plastid	37.87	40.51
CDY16146	Canola	plastid	49.56	40.02
TraesCS1D01G126300.1	Wheat	plastid	38.17	39.51
Bra004331.1-P	Field mustard	plastid	48.22	37.64
Bra024725.1-P	Field mustard	plastid	45.27	37.36
CDY38610	Canola	plastid	48.67	37.34
TraesCS7D01G232700.1	Wheat	nucleus, plastid	40.98	36.88
Solyc04g006930.2.1	Tomato	plastid	43.49	36.75
GSMUA_Achr8P13750_001	Banana	cytosol, nucleus, plastid	45.41	35.01
TraesCS3D01G217700.1	Wheat	cytosol, nucleus, peroxisome	24.7	22.09
TraesCS3D01G402800.1	Wheat	mitochondrion	21.75	21.34
TraesCS1D01G442500.1	Wheat	plastid	25.3	19.28

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.22	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF07714	PRINTS:PR01217	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF66	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS3D01G278400	EnsemblPlants:TraesCS3D01G278400.1	TIGR:cd14066
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr3D:-:385471911..385475649

Molecular Weight (calculated)

71258.4 Da

IEP (calculated)

7.953

GRAVY (calculated)

-0.464

Length

676 amino acids

Sequence
(BLAST)

001: MGGYADPFMP PQPASSSSYA VPQGGHGQPQ PQPAPRPPGC PYSSSASAPP VSTSYHSLPP AASPPPVSSP PPASPPPEPL PSPPPALPSS PPPPALSPPP
101: PDAPPPSLPP PSPSPSPPPA EVQAPPPPXX XXXXXXXXXV YPSPPPPSLP PPPPVVLSPP APPPSHPPSP SPTPAPAPAP TPVAVYSPPP PRVASPPPPR
201: HHTKPHYAPP RSPGRSHLNS TRSNGSGKNI EISRETATTI VAIAGLAMLS FIGATIWLVK KKRRRAEPPS ALPTQQQPAP PPPPPNYIPS SAGSSLASDG
301: FYLRSPGYPF MRSSTGSHGF PYSPADSGIG YSRMLFTPEN LAGISNDFSD ENLLGEGGFG CVYKGILPDG RPVAIKKLKI GNGQGEREFR AEVDTISRVH
401: HRHLVSLVGY CVSEGQRMLV YDFVPNNTLY YHLHVNEVPL DWRTRVKIAA GAARGIAYLH EDCHPRIIHR DIKSSNILLD NNFEAQVSDF GLARLAADSN
501: THVTTRVMGT FGYLAPEYAL SGKLTAKSDL YSFGVVLLEL ITGRKPVDSS QPLGDESLVE WARPFLSQAI EHRDFGDLPD PRMENKFEEN EMYHMIGAAA
601: ACIRHSAVMR PRMGQVVRAL DSLADSNLNN GLQPGRSEVF LEPRTEEIRL FQLREFGSRE CSDELSQASW RSRRDL

Best Arabidopsis Sequence Match ( AT1G26150.1 )
(BLAST)

001: MTTPAQAPRE EVSLSPSLAS PPLMALPPPQ PSFPGDNATS PTREPTNGNP PETTNTPAQS SPPPETPLSS PPPEPSPPSP SLTGPPPTTI PVSPPPEPSP
101: PPPLPTEAPP PANPVSSPPP ESSPPPPPPT EAPPTTPITS PSPPTNPPPP PESPPSLPAP DPPSNPLPPP KLVPPSHSPP RHLPSPPASE IPPPPRHLPS
201: PPASERPSTP PSDSEHPSPP PPGHPKRREQ PPPPGSKRPT PSPPSPSDSK RPVHPSPPSP PEETLPPPKP SPDPLPSNSS SPPTLLPPSS VVSPPSPPRK
301: SVSGPDNPSP NNPTPVTDNS SSSGISIAAV VGVSIGVALV LLTLIGVVVC CLKKRKKRLS TIGGGYVMPT PMESSSPRSD SALLKTQSSA PLVGNRSSNR
401: TYLSQSEPGG FGQSRELFSY EELVIATNGF SDENLLGEGG FGRVYKGVLP DERVVAVKQL KIGGGQGDRE FKAEVDTISR VHHRNLLSMV GYCISENRRL
501: LIYDYVPNNN LYFHLHAAGT PGLDWATRVK IAAGAARGLA YLHEDCHPRI IHRDIKSSNI LLENNFHALV SDFGLAKLAL DCNTHITTRV MGTFGYMAPE
601: YASSGKLTEK SDVFSFGVVL LELITGRKPV DASQPLGDES LVEWARPLLS NATETEEFTA LADPKLGRNY VGVEMFRMIE AAAACIRHSA TKRPRMSQIV
701: RAFDSLAEED LTNGMRLGES EIINSAQQSA EIRLFRRMAF GSQNYSTDSL TRNSYISKDE NL

Arabidopsis Description

PERK10Proline-rich receptor-like protein kinase PERK10 [Source:UniProtKB/Swiss-Prot;Acc:Q9C660]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.