Factsheet for GSMUA_Achr8P13750_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr9P09250_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G38560.1	GSMUA_Achr9P09250_001	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P29720_001	Banana	mitochondrion	36.94	81.2
GSMUA_Achr1P25240_001	Banana	mitochondrion	31.24	57.2
Solyc02g089750.2.1	Tomato	cytosol	10.83	54.29
VIT_14s0083g00330.t01	Wine grape	plasma membrane	26.23	52.75
Bra004022.1-P	Field mustard	plastid	22.92	51.67
GSMUA_Achr2P09600_001	Banana	plastid	36.49	48.71
KRH07595	Soybean	plastid	29.53	48.68
PGSC0003DMT400026193	Potato	plastid	36.26	46.63
TraesCS3A01G278100.1	Wheat	plastid	35.35	45.93
TraesCS3B01G312300.1	Wheat	plastid	35.23	45.64
EES01447	Sorghum	plastid	35.12	45.63
GSMUA_Achr2P14510_001	Banana	plastid	34.09	45.51
HORVU3Hr1G070200.1	Barley	plastid	35.01	45.48
TraesCS3D01G278400.1	Wheat	cytosol, plastid	35.01	45.41
VIT_01s0011g02460.t01	Wine grape	plastid	37.4	45.18
Zm00001d012774_P001	Maize	cytosol, plastid	34.32	45.06
GSMUA_Achr4P24400_001	Banana	plastid	33.87	44.93
Os01t0738300-01	Rice	cytosol	34.21	44.71
Zm00001d043562_P008	Maize	cytosol	34.89	44.67
Bra028192.1-P	Field mustard	plastid	33.18	43.5
GSMUA_Achr10P...	Banana	plastid	35.35	43.24
CDY01653	Canola	plastid	32.38	43.23
KRH45181	Soybean	plastid	35.58	43.09
CDX74517	Canola	plastid	32.5	42.92
AT5G38560.1	Thale cress	plastid	33.18	42.73
CDY04245	Canola	plastid	32.95	42.56
KRH01485	Soybean	plastid	36.6	42.46
KRH75567	Soybean	plastid	34.44	42.42
KRH71097	Soybean	plastid	35.69	42.3
GSMUA_Achr8P19800_001	Banana	cytosol	19.61	41.75
CDY07370	Canola	plastid	31.7	41.74
GSMUA_Achr7P14360_001	Banana	plastid	25.43	41.14
PGSC0003DMT400041343	Potato	plastid	34.55	41.0
PGSC0003DMT400019290	Potato	mitochondrion	32.5	40.95
Solyc01g010030.2.1	Tomato	plastid	33.98	40.82
GSMUA_Achr5P06880_001	Banana	plastid	19.27	40.82
GSMUA_Achr10P...	Banana	plastid	22.8	40.82
CDY59350	Canola	plastid	30.79	40.72
AT1G68690.2	Thale cress	plastid	32.84	40.68
CDX95997	Canola	plastid	33.87	40.46
AT1G26150.1	Thale cress	plastid	34.89	40.16
GSMUA_Achr6P27340_001	Banana	cytosol, endoplasmic reticulum, plastid	23.83	40.04
PGSC0003DMT400064597	Potato	plastid	33.07	38.93
Solyc05g010140.2.1	Tomato	plastid	33.07	38.67
GSMUA_Achr7P26790_001	Banana	plastid	18.59	37.39
CDY16146	Canola	plastid	34.78	36.44
GSMUA_Achr1P13940_001	Banana	plastid	29.3	36.4
Solyc04g006930.2.1	Tomato	plastid	31.81	34.88
Bra004331.1-P	Field mustard	plastid	34.44	34.87
Bra024725.1-P	Field mustard	plastid	32.38	34.68
CDY38610	Canola	plastid	34.78	34.62
GSMUA_Achr10P...	Banana	plastid	21.44	34.18
GSMUA_Achr5P02090_001	Banana	nucleus	22.8	34.01
GSMUA_Achr4P10790_001	Banana	plastid	23.6	32.5
GSMUA_Achr7P00830_001	Banana	plastid	22.58	32.25
GSMUA_Achr4P32080_001	Banana	plastid	22.58	32.14
GSMUA_Achr10P...	Banana	cytosol	21.66	31.67
GSMUA_Achr3P15710_001	Banana	plastid	26.11	31.37
GSMUA_Achr4P03200_001	Banana	mitochondrion, plasma membrane	24.06	31.08
GSMUA_Achr7P14330_001	Banana	plasma membrane	15.05	30.21
GSMUA_Achr7P14350_001	Banana	plasma membrane	15.62	30.18
GSMUA_Achr6P26510_001	Banana	cytosol	16.76	20.53
GSMUA_Achr1P04890_001	Banana	cytosol	16.42	20.31
GSMUA_Achr9P05910_001	Banana	plasma membrane	16.53	19.67
GSMUA_Achr6P18630_001	Banana	cytosol, nucleus, plasma membrane	11.86	19.37
GSMUA_Achr8P04820_001	Banana	cytosol, plasma membrane, plastid	14.71	17.09
GSMUA_Achr5P07770_001	Banana	cytosol	13.34	15.56

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	Gene3D:3.40.50.10480	MapMan:50.2.7	InterPro:Brix	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr8G13750_001	EnsemblPlants:GSMUA_Achr8P13750_001
EnsemblPlants:GSMUA_Achr8T13750_001	InterPro:IPR000719	InterPro:IPR007109	InterPro:Kinase-like_dom_sf	UniProt:M0TQ78	PFAM:PF00069
PRINTS:PR01217	PFscan:PS50011	PFscan:PS50833	PANTHER:PTHR27001	PANTHER:PTHR27001:SF489	InterPro:Prot_kinase_dom
SMART:SM00220	SMART:SM00879	SUPFAM:SSF52954	SUPFAM:SSF56112	TMHMM:TMhelix	UniParc:UPI00029691B5
SEG:seg	:	:	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G13750_001]

Coordinates

chr8:+:10522662..10535778

Molecular Weight (calculated)

96489.1 Da

IEP (calculated)

7.150

GRAVY (calculated)

-0.379

Length

877 amino acids

Sequence
(BLAST)

001: MGNDGVKRKK AEGSDVDEQE TWDNKKTKKG MTLPLMIKNK EKRSTPLEKK VPRTIENTRE VDETVCRPDD EELFTWDDAD EFRQVLKQDV TPKILIIINR
101: FNSIVRFLCS SFHHFYLFFH CLFVFDARVF SPSLFEPPEK KAPRTIENTR EVDEMVCRPD DEDLFAGNDA DEFSQVLKQE VMLKIIITTN RFKSTRRGPP
201: FIQELLSMIP NAHYYNRGTY ELKKIVEYAK NKDFTSVVVV HSNRREPDAL LIINLPDELT AYFKLSKLVF GYYNQSQPSI PPPTSNGHPP SLPPPPPPAS
301: QPPSAPVDAY TPPPEPLSPP PPPASSPPPP PPTPELYPPP PSAAPPAVTP PPPLSPPPAA IPPMSPIYYQ SPPPPPPSYV PPSSPPLPPP PALPSPPLNS
401: APASPLAPPP KALSPPPPPP YISNSTPPVS SSMPPRSPPS LPLPAPIKPN VPSSSNSSKH TGSSHGSSNA LKSAANTSET VVTVAVVAGL VMLTFVGAAV
501: WLVKKHKKPF APTAYRGNLV SASPASSHAT ESSRARSPSY PLIRHGSEGS YGFPYSPSDL GLGHTKLWFT LEEPSIITND FSTQNLLGEG GCGCVYKGWL
601: RDGREVAVKQ IKVGGAQGER EFKSEYHLHG KGMPIMDWTV RVKVAVGAAR GIAYLHEDCN FLFPFFLLCQ DIKSSNILLD YSFEAQVSDF GLARMAVDAN
701: AHVTTRVMGT FGYLAPEYAT SGKLTSNSDV FSFGVVLLEL ITGRKPVDTS QPVGDESLVE WVSSIPITFH YFLLCQKLIK ILETCQILRL DGNYNKDEMF
801: RMIEIAAACT RHSSTMRPRM GQVVRALESL ADLDINNGVR PGQSEVFDSS QQSEEIRMFQ KMGFVSQEHN SDYSRTN

Best Arabidopsis Sequence Match ( AT1G26150.1 )
(BLAST)

001: MTTPAQAPRE EVSLSPSLAS PPLMALPPPQ PSFPGDNATS PTREPTNGNP PETTNTPAQS SPPPETPLSS PPPEPSPPSP SLTGPPPTTI PVSPPPEPSP
101: PPPLPTEAPP PANPVSSPPP ESSPPPPPPT EAPPTTPITS PSPPTNPPPP PESPPSLPAP DPPSNPLPPP KLVPPSHSPP RHLPSPPASE IPPPPRHLPS
201: PPASERPSTP PSDSEHPSPP PPGHPKRREQ PPPPGSKRPT PSPPSPSDSK RPVHPSPPSP PEETLPPPKP SPDPLPSNSS SPPTLLPPSS VVSPPSPPRK
301: SVSGPDNPSP NNPTPVTDNS SSSGISIAAV VGVSIGVALV LLTLIGVVVC CLKKRKKRLS TIGGGYVMPT PMESSSPRSD SALLKTQSSA PLVGNRSSNR
401: TYLSQSEPGG FGQSRELFSY EELVIATNGF SDENLLGEGG FGRVYKGVLP DERVVAVKQL KIGGGQGDRE FKAEVDTISR VHHRNLLSMV GYCISENRRL
501: LIYDYVPNNN LYFHLHAAGT PGLDWATRVK IAAGAARGLA YLHEDCHPRI IHRDIKSSNI LLENNFHALV SDFGLAKLAL DCNTHITTRV MGTFGYMAPE
601: YASSGKLTEK SDVFSFGVVL LELITGRKPV DASQPLGDES LVEWARPLLS NATETEEFTA LADPKLGRNY VGVEMFRMIE AAAACIRHSA TKRPRMSQIV
701: RAFDSLAEED LTNGMRLGES EIINSAQQSA EIRLFRRMAF GSQNYSTDSL TRNSYISKDE NL

Arabidopsis Description

PERK10Proline-rich receptor-like protein kinase PERK10 [Source:UniProtKB/Swiss-Prot;Acc:Q9C660]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.