Factsheet for PGSC0003DMT400064597

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 5
plasma membrane 3
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
EpiLoc:	plasma membrane
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g010140.2.1	Tomato	plastid	95.3	94.67
Os05t0100700-02	Rice	plasma membrane	24.56	69.58
Bra004022.1-P	Field mustard	plastid	36.11	69.15
PGSC0003DMT400019290	Potato	mitochondrion	60.81	65.09
GSMUA_Achr8P29720_001	Banana	mitochondrion	33.69	62.91
KRH07595	Soybean	plastid	43.62	61.09
TraesCS3D01G005400.1	Wheat	cytosol	32.35	60.1
TraesCS1B01G001500.1	Wheat	plastid	28.86	59.89
PGSC0003DMT400041343	Potato	plastid	58.12	58.59
VIT_01s0011g02460.t01	Wine grape	plastid	55.84	57.3
GSMUA_Achr1P25240_001	Banana	mitochondrion	35.3	54.91
GSMUA_Achr2P09600_001	Banana	plastid	47.65	54.03
PGSC0003DMT400026193	Potato	plastid	49.26	53.81
KRH71097	Soybean	plastid	53.29	53.65
CDY07370	Canola	plastid	47.79	53.45
CDY04245	Canola	plastid	48.46	53.17
GSMUA_Achr2P14510_001	Banana	plastid	46.85	53.12
KRH75567	Soybean	plastid	50.74	53.09
AT1G68690.2	Thale cress	plastid	50.07	52.68
CDY59350	Canola	plastid	46.71	52.49
GSMUA_Achr4P24400_001	Banana	plastid	46.44	52.34
Zm00001d035774_P001	Maize	plastid	41.74	52.27
Zm00001d040127_P001	Maize	plasma membrane	47.65	51.37
KXG32101	Sorghum	plastid	48.19	51.36
GSMUA_Achr10P...	Banana	plastid	48.86	50.77
CDX95997	Canola	plastid	49.93	50.68
KXG20993	Sorghum	plastid	41.21	50.66
HORVU3Hr1G000770.2	Barley	plastid	46.44	50.51
TraesCS3B01G008600.2	Wheat	plastid	46.17	50.15
TraesCS3A01G003900.1	Wheat	plastid	46.04	49.93
AT1G26150.1	Thale cress	plastid	51.01	49.87
Os01t0110500-01	Rice	plasma membrane	46.71	49.86
EES01447	Sorghum	plastid	44.83	49.48
TraesCS3A01G278100.1	Wheat	plastid	44.7	49.33
HORVU3Hr1G070200.1	Barley	plastid	44.7	49.33
TraesCS3B01G312300.1	Wheat	plastid	44.7	49.19
Os01t0738300-01	Rice	cytosol	44.16	49.03
TraesCS3D01G278400.1	Wheat	cytosol, plastid	44.43	48.96
Zm00001d012774_P001	Maize	cytosol, plastid	43.89	48.95
Zm00001d008433_P007	Maize	plastid	47.38	48.36
Zm00001d043562_P008	Maize	cytosol	44.3	48.18
TraesCS1D01G004300.1	Wheat	plastid	41.61	47.26
HORVU1Hr1G000090.3	Barley	plastid	40.81	46.06
PGSC0003DMT400038554	Potato	nucleus, plastid	29.93	45.14
CDY16146	Canola	plastid	50.47	44.92
CDY38610	Canola	plastid	51.68	43.7
Bra004331.1-P	Field mustard	plastid	50.74	43.65
Bra024725.1-P	Field mustard	plastid	47.11	42.86
PGSC0003DMT400001024	Potato	plastid	39.19	41.89
PGSC0003DMT400040010	Potato	nucleus, plastid	35.3	40.9
PGSC0003DMT400006515	Potato	plastid	31.95	40.48
PGSC0003DMT400045839	Potato	cytosol, plastid	38.52	39.42
PGSC0003DMT400037638	Potato	plastid	30.47	39.14
PGSC0003DMT400062758	Potato	nucleus	35.44	36.87
PGSC0003DMT400001868	Potato	nucleus, plastid	32.62	35.63
GSMUA_Achr8P13750_001	Banana	cytosol, nucleus, plastid	38.93	33.07
PGSC0003DMT400083900	Potato	cytosol, nucleus, peroxisome	24.43	31.16
PGSC0003DMT400006664	Potato	cytosol	26.58	26.87
PGSC0003DMT400024762	Potato	cytosol, plasma membrane, plastid	23.76	26.5
PGSC0003DMT400008513	Potato	cytosol, plasma membrane, plastid	20.0	23.24
PGSC0003DMT400008632	Potato	mitochondrion	20.94	21.79

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102594002	MapMan:18.4.1.22	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	UniProt:M1CCM6	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400025102	PGSC:PGSC0003DMG400025102	EnsemblPlants:PGSC0003DMT400064597
PRINTS:PR01217	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF489
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix
UniParc:UPI000296239A	RefSeq:XP_006348594.1	RefSeq:XP_006348595.1	SEG:seg	:	:

Description

ATP binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400025102]

Coordinates

chr5:+:1583153..1591150

Molecular Weight (calculated)

77853.6 Da

IEP (calculated)

6.110

GRAVY (calculated)

-0.431

Length

745 amino acids

Sequence
(BLAST)

001: MSVVVSPPPS LAPFPVPPVV LSPPPQLSSP VPASQPNATA PPVSSLPPTL PPQSSPPPAS PTLPQSPPPS NVTLPPPMAS PPTESAPPTV SPPPIPPASS
101: PPPISSPPPS SSPPPQSSPP PASSPPTTPS PPVSSSPPPE VEPPPVSPPP QPTVPTSSPP PPPKDDPPPT SPPPQPTTPP SSPSPPPKVD SPPFSPPPPA
201: QNPDPTPPPQ SPEPPKGSPP SPPVNSPPSP ASVPPKGSPP TPASDPPTNS PPSPAFTPPQ GSPPTPSLEP PKNTPSSPSV PSGGTTTNSS SDDAAGSSNS
301: PSSSGLGTGG TVAIGVIVAV LLLSIVGLVG WCVWKRKKKA FRPSGGNVMP TPSGSTPNSD SVLLKIQEST PDTRNGTGNK FLNSPGGSGG FGNPKIWFTY
401: EELVKATGDF SAENLLGAGG FGSVYKGCLP DGRDVAVKQL DIGGSQGDRE FRAEVEIISR VHHRHLVSLV GYCISENRRL LVYEYVPNNT LYFHLHAEGR
501: PVMDWTTRVK IAVGAARGIA YLHEDCHPRI IHRDIKSSNI LLDINFEARV SDFGLAKLAQ DAKTHVTTRV VGTFGYMAPE YASSGKLTEK SDIYSFGVVL
601: LELITGRKPV DTSQPLGDES LVEWARPLLS HALEKLEFDQ LADPRLERNY VIPEMFQLIE AAAACVRHSA AKRPGMGQIM RAFDNMSVSD LTNGMKVGES
701: TIYNSAEQSA EIRLFRRMAF GSPDFSSDFF SQGTQHSVES AEDRV

Best Arabidopsis Sequence Match ( AT1G70460.1 )
(BLAST)

001: MSDSPTSSPP APSADSAPPP DTSSDGSAAP PPTDSAPPPS PPADSSPPPA LPSLPPAVFS PPPTVSSPPP PPLDSSPPPP PDLTPPPSSP PPPDAPPPIP
101: IVFPPPIDSP PPESTNSPPP PEVFEPPPPP ADEDESPPAP PPPEQLPPPA SSPQGGPKKP KKHHPGPATS PPAPSAPATS PPAPPNAPPR NSSHALPPKS
201: TAAGGPLTSP SRGVPSSGNS VPPPANSGGG YQGKTMAGFA IAGFAVIALM AVVFLVRRKK KRNIDAYSDS QYLPPSNFSI KSDGFLYGQN PTKGYSGPGG
301: YNSQQQSNSG NSFGSQRGGG GYTRSGSAPD SAVMGSGQTH FTYEELTDIT EGFSKHNILG EGGFGCVYKG KLNDGKLVAV KQLKVGSGQG DREFKAEVEI
401: ISRVHHRHLV SLVGYCIADS ERLLIYEYVP NQTLEHHLHG KGRPVLEWAR RVRIAIGSAK GLAYLHEDCH PKIIHRDIKS ANILLDDEFE AQVADFGLAK
501: LNDSTQTHVS TRVMGTFGYL APEYAQSGKL TDRSDVFSFG VVLLELITGR KPVDQYQPLG EESLVEWARP LLHKAIETGD FSELVDRRLE KHYVENEVFR
601: MIETAAACVR HSGPKRPRMV QVVRALDSEG DMGDISNGNK VGQSSAYDSG QYNNDTMKFR KMAFGFDDSS DSGMYSGDYS VQDSRKGSNG ASSEFTRNET
701: ENRNFNNRRY

Arabidopsis Description

PERK13RHS10 [Source:UniProtKB/TrEMBL;Acc:A0A178WB53]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.