Factsheet for PGSC0003DMT400006515

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 5
cytosol 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g120760.2.1	Tomato	plasma membrane, plastid	95.07	96.21
GSMUA_Achr8P19800_001	Banana	cytosol	45.07	64.32
GSMUA_Achr5P06880_001	Banana	plastid	44.9	63.77
GSMUA_Achr10P...	Banana	plastid	47.79	57.35
VIT_09s0002g04210.t01	Wine grape	plastid	52.21	55.72
CDY02546	Canola	plastid	47.79	54.78
CDY47531	Canola	plastid	48.13	54.74
Bra014321.1-P	Field mustard	plastid	47.79	54.35
AT1G52290.1	Thale cress	plastid	46.94	54.22
Bra038894.1-P	Field mustard	cytosol	14.97	53.01
GSMUA_Achr7P14360_001	Banana	plastid	47.11	51.11
EES19240	Sorghum	cytosol, plasma membrane, plastid	50.17	50.69
HORVU1Hr1G030140.2	Barley	plastid	51.53	49.75
Bra021251.1-P	Field mustard	cytosol	9.35	49.55
Zm00001d039311_P001	Maize	mitochondrion	52.21	49.52
KRH47030	Soybean	nucleus, plastid	47.96	49.47
OQU86081	Sorghum	plastid	51.36	48.71
Os01t0227200-01	Rice	plasma membrane	48.98	48.24
GSMUA_Achr10P...	Banana	cytosol	48.47	47.5
TraesCS1D01G126300.1	Wheat	plastid	52.72	47.47
TraesCS3B01G179300.1	Wheat	plastid	50.85	47.39
TraesCS1A01G127900.1	Wheat	plastid	52.72	47.11
Os05t0218400-01	Rice	plasma membrane	53.57	46.67
TraesCS3A01G152200.1	Wheat	plastid	50.0	46.67
TraesCS3D01G160000.1	Wheat	plastid	50.0	46.52
TraesCS1B01G147000.2	Wheat	plastid	48.81	46.52
HORVU3Hr1G030900.1	Barley	plastid	49.66	46.42
Zm00001d037811_P001	Maize	plasma membrane	38.78	46.06
PGSC0003DMT400001024	Potato	plastid	54.59	46.05
Zm00001d010421_P002	Maize	plasma membrane	52.21	45.21
PGSC0003DMT400038554	Potato	nucleus, plastid	36.56	43.52
CDY48706	Canola	cytosol	38.95	43.37
PGSC0003DMT400037638	Potato	plastid	41.5	42.07
PGSC0003DMT400040010	Potato	nucleus, plastid	45.07	41.21
KRH47029	Soybean	plastid	38.61	41.12
PGSC0003DMT400062758	Potato	nucleus	47.28	38.83
PGSC0003DMT400001868	Potato	nucleus, plastid	44.73	38.56
PGSC0003DMT400045839	Potato	cytosol, plastid	47.62	38.46
PGSC0003DMT400026193	Potato	plastid	42.35	36.51
PGSC0003DMT400019290	Potato	mitochondrion	39.63	33.48
PGSC0003DMT400064597	Potato	plastid	40.48	31.95
PGSC0003DMT400041343	Potato	plastid	38.78	30.85
CDY46900	Canola	plasma membrane	35.71	28.42
PGSC0003DMT400083900	Potato	cytosol, nucleus, peroxisome	27.72	27.91
Bra021250.1-P	Field mustard	plasma membrane	42.52	27.47
Bra035231.1-P	Field mustard	plasma membrane	34.35	23.93
PGSC0003DMT400006664	Potato	cytosol	29.76	23.74
PGSC0003DMT400024762	Potato	cytosol, plasma membrane, plastid	26.36	23.2
PGSC0003DMT400008513	Potato	cytosol, plasma membrane, plastid	23.47	21.53
PGSC0003DMT400008632	Potato	mitochondrion	23.81	19.55
Bra021253.1-P	Field mustard	plasma membrane	34.35	17.88
CDY48704	Canola	cytosol, mitochondrion, plasma membrane, plastid	10.88	16.49

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102586678	MapMan:18.4.1.22	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	UniProt:M0ZRH7	PFAM:PF07714	EnsemblPlantsGene:PGSC0003DMG401002542	PGSC:PGSC0003DMG401002542	EnsemblPlants:PGSC0003DMT400006515
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF89	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix
UniParc:UPI0002956900	RefSeq:XP_006343064.1	SEG:seg	:	:	:

Description

ATP binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG401002542]

Coordinates

chr3:-:60098538..60105967

Molecular Weight (calculated)

63886.3 Da

IEP (calculated)

6.933

GRAVY (calculated)

-0.409

Length

588 amino acids

Sequence
(BLAST)

001: MSTGPPGVPL GPPLPFPPAD NATTPTSPVN PSTTPPSPDV ASQPSSATLV NPPPSSINGS SPTSAPSKGS ANNTTLVALG VGIGIGGALV LICVCIFALW
101: YKRRKRRLGL NGFGHDPSSQ GPKDNLFGGQ HHHWQQNAPP SAENMVRIPI NPSPPPSITS VSQVSAADGC TPPLPPSTGS NFSTDKPFQQ TNPDSNLSFS
201: RTTFTYQELA FATDNFSVAN LLGQGGFGYV YKGVFRDGKE VAIKQLKAGS GQGEREFQAE VEIISHVHHK HLVSLVGHCI SGVQRLLVYE FVPNKTLEFH
301: LHGDITAGKE HPPLSWETRM RVTLCSARGL AYLHEECHPK IIHRDIKASN ILLDDNFDAK VADFGLARLN YDSDTHVSTR VMGTFGYLAP EYALTGKLTE
401: KSDVFSFGVM LLEIITGRRP IDKAQHYLDD NIVDWARPLL TQALDDGNFD TLADPRLDKN YDLTEMTRMV TCAAVCVRHL ARRRPRMSQI VRALEGNLPL
501: DELNDGLRPG HSGIHESYGS SDFDAVQYKE DLKKFRKMAL ESQTHNSSEC SGPTSEFGPH PSGSSSEGLR TTQGTRSSIE GHREIRID

Best Arabidopsis Sequence Match ( AT3G24550.1 )
(BLAST)

001: MSTAPSPGTT PSPSPPSPPT NSTTTTPPPA ASSPPPTTTP SSPPPSPSTN STSPPPSSPL PPSLPPPSPP GSLTPPLPQP SPSAPITPSP PSPTTPSNPR
101: SPPSPNQGPP NTPSGSTPRT PSNTKPSPPS DSSDGLSTGV VVGIAIGGVA ILVILTLICL LCKKKRRRRH DDEAAYYVPP PPPSGPKAGG PYGGQQQYWQ
201: QQNASRPSDN HVVTSLPPPK PPSPPRKPPP PPPPPAFMSS SGGSDYSDLP VLPPPSPGLV LGFSKSTFTY EELSRATNGF SEANLLGQGG FGYVHKGILP
301: SGKEVAVKQL KAGSGQGERE FQAEVEIISR VHHRHLVSLI GYCMAGVQRL LVYEFVPNNN LEFHLHGKGR PTMEWSTRLK IALGSAKGLS YLHEDCNPKI
401: IHRDIKASNI LIDFKFEAKV ADFGLAKIAS DTNTHVSTRV MGTFGYLAPE YAASGKLTEK SDVFSFGVVL LELITGRRPV DANNVYVDDS LVDWARPLLN
501: RASEEGDFEG LADSKMGNEY DREEMARMVA CAAACVRHSA RRRPRMSQIV RALEGNVSLS DLNEGMRPGH SNVYSSYGGS TDYDTSQYND DMIKFRKMAL
601: GTQEYGTTGE YSNPTSDYGL YPSGSSSEGQ ATREMEMGKI KKTGQGYSGP SL

Arabidopsis Description

PERK1Proline-rich receptor-like protein kinase PERK1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LV48]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.