CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, cytosol

Predictor Summary:

nucleus 1
plasma membrane 1
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P06880_001	Banana	plastid	59.45	83.57
HORVU1Hr1G030140.2	Barley	plastid	82.99	79.31
Zm00001d010421_P002	Maize	plasma membrane	89.86	77.03
GSMUA_Achr8P19800_001	Banana	cytosol	52.92	74.76
TraesCS1D01G126300.1	Wheat	plastid	83.33	74.27
TraesCS1A01G127900.1	Wheat	plastid	83.85	74.16
Os05t0218400-01	Rice	plasma membrane	85.4	73.63
TraesCS1B01G147000.2	Wheat	plastid	77.49	73.1
GSMUA_Achr10P...	Banana	plastid	59.45	70.61
Zm00001d037811_P001	Maize	plasma membrane	59.62	70.1
GSMUA_Achr7P14360_001	Banana	plastid	59.45	63.84
VIT_11s0016g03880.t01	Wine grape	plastid	67.7	60.62
OQU86081	Sorghum	plastid	63.92	60.0
KRH48383	Soybean	mitochondrion	68.56	59.46
GSMUA_Achr10P...	Banana	cytosol	61.17	59.33
KRH39292	Soybean	plastid	67.35	59.04
Bra015053.1-P	Field mustard	plastid	63.92	57.76
CDY39543	Canola	plastid	64.09	57.47
Solyc12g007110.1.1	Tomato	nucleus	67.53	57.37
CDX77417	Canola	plastid	63.57	56.92
PGSC0003DMT400001024	Potato	plastid	67.53	56.38
AT3G24550.1	Thale cress	plastid	63.06	56.29
VIT_09s0002g04210.t01	Wine grape	plastid	53.09	56.08
AT1G52290.1	Thale cress	plastid	47.08	53.83
Bra038894.1-P	Field mustard	cytosol	14.95	52.41
CDY02546	Canola	plastid	46.05	52.24
KRH47030	Soybean	nucleus, plastid	51.03	52.11
CDY47531	Canola	plastid	46.22	52.03
AT3G24540.1	Thale cress	cytosol	42.61	51.77
Bra014321.1-P	Field mustard	plastid	45.88	51.64
KXG39820	Sorghum	plastid	50.17	51.05
EER91832	Sorghum	plastid	48.63	50.81
Solyc03g120760.2.1	Tomato	plasma membrane, plastid	50.17	50.26
PGSC0003DMT400006515	Potato	plastid	50.69	50.17
EER97954	Sorghum	plastid	48.28	49.13
EER90803	Sorghum	plastid	48.97	47.26
Bra028371.1-P	Field mustard	plastid	53.44	47.12
Bra021251.1-P	Field mustard	cytosol	8.93	46.85
CDY48706	Canola	cytosol	40.03	44.13
KRH47029	Soybean	plastid	40.38	42.57
KXG39708	Sorghum	plastid	38.49	39.51
KXG20993	Sorghum	plastid	38.83	37.29
KXG33373	Sorghum	plastid	45.19	36.99
EES01447	Sorghum	plastid	39.35	33.93
KXG32101	Sorghum	plastid	40.55	33.76
KXG32962	Sorghum	plastid	40.03	33.33
KXG19971	Sorghum	plastid	40.03	32.63
CDY46900	Canola	plasma membrane	35.05	27.6
Bra021250.1-P	Field mustard	plasma membrane	39.69	25.38
EES18801	Sorghum	cytosol	30.93	24.66
EES01025	Sorghum	plasma membrane	31.62	24.57
KXG22354	Sorghum	plastid	44.5	23.46
Bra035231.1-P	Field mustard	plasma membrane	31.1	21.45
KXG33822	Sorghum	mitochondrion	22.68	19.3
Bra021253.1-P	Field mustard	plasma membrane	30.76	15.84
CDY48704	Canola	cytosol, mitochondrion, plasma membrane, plastid	8.76	13.14

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.22	Gene3D:3.30.200.20	UniProt:C5YUU0	EnsemblPlants:EES19240	ProteinID:EES19240
ProteinID:EES19240.3	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF07714	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF89	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	EnsemblPlantsGene:SORBI_3009G082600
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI000B8BA210	SEG:seg

Description

hypothetical protein

Coordinates

chr9:+:12041832..12047235

Molecular Weight (calculated)

63524.2 Da

IEP (calculated)

9.258

GRAVY (calculated)

-0.566

Length

582 amino acids

Sequence
(BLAST)

001: MATGKSSRDR KRRAAEKGSG AGVHEKRSKC VMRTLSGYYF HPSHGHSHSP RGGGSGGGSS GPSTWLVVGV AVGGVVLLLL SSFICLCCLR KKRRRPQPPP
101: QHYGYPPPPP PYKEDPYGGT YQSWQQNAPP PQPPEHVVKM HPSPPPAYAN RPPQPPPPPP PAMLNSSGGS GSNYSGGEIL PPPSPGAALG FSSKSTFTYE
201: ELLRATDGFS DANLLGQGGF GYVHRGLLPN GKEIAVKQLK LGSGQGEREF QAEVEIISRV HHKHLVSLVG YCISGGKRLL VYEFVPNNTL EFHLHAKDRP
301: TMEWPTRLKI ALGAAKGLAY LHEDCHPKII HRDIKASNIL LDFKFEAKVA DFGLAKFTTD NNTHVSTRVM GTFGYLAPEY ASSGKLTEKS DVFSYGVMLL
401: ELITGRRPVD TTQTYMDDSL VDWARPLLMR ALEDGEYDAL VDPRLGKDFN PNEMARMIAC AAACVRHSAR RRPRMSQVVR ALEGDVSLED LNEGVRPGHS
501: RFFGSYSSSD YDSGQYNEDM KKFRKMAFNN NYTSSQYSAP TSEYGQIPSA SSSEGHQTQE MESGAMKKGG YSGYSSGYSG AS

Best Arabidopsis Sequence Match ( AT3G24550.1 )
(BLAST)

001: MSTAPSPGTT PSPSPPSPPT NSTTTTPPPA ASSPPPTTTP SSPPPSPSTN STSPPPSSPL PPSLPPPSPP GSLTPPLPQP SPSAPITPSP PSPTTPSNPR
101: SPPSPNQGPP NTPSGSTPRT PSNTKPSPPS DSSDGLSTGV VVGIAIGGVA ILVILTLICL LCKKKRRRRH DDEAAYYVPP PPPSGPKAGG PYGGQQQYWQ
201: QQNASRPSDN HVVTSLPPPK PPSPPRKPPP PPPPPAFMSS SGGSDYSDLP VLPPPSPGLV LGFSKSTFTY EELSRATNGF SEANLLGQGG FGYVHKGILP
301: SGKEVAVKQL KAGSGQGERE FQAEVEIISR VHHRHLVSLI GYCMAGVQRL LVYEFVPNNN LEFHLHGKGR PTMEWSTRLK IALGSAKGLS YLHEDCNPKI
401: IHRDIKASNI LIDFKFEAKV ADFGLAKIAS DTNTHVSTRV MGTFGYLAPE YAASGKLTEK SDVFSFGVVL LELITGRRPV DANNVYVDDS LVDWARPLLN
501: RASEEGDFEG LADSKMGNEY DREEMARMVA CAAACVRHSA RRRPRMSQIV RALEGNVSLS DLNEGMRPGH SNVYSSYGGS TDYDTSQYND DMIKFRKMAL
601: GTQEYGTTGE YSNPTSDYGL YPSGSSSEGQ ATREMEMGKI KKTGQGYSGP SL

Arabidopsis Description

PERK1Proline-rich receptor-like protein kinase PERK1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LV48]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.