CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY02546	Canola	plastid	98.07	98.83
AT1G52290.1	Thale cress	plastid	80.46	81.73
GSMUA_Achr5P06880_001	Banana	plastid	50.68	63.28
GSMUA_Achr8P19800_001	Banana	cytosol	49.32	61.89
CDX75275	Canola	cytosol	41.2	60.51
GSMUA_Achr10P...	Banana	plastid	52.8	55.71
CDY48706	Canola	cytosol	53.77	52.65
CDX92276	Canola	plasma membrane	47.97	51.67
VIT_09s0002g04210.t01	Wine grape	plastid	54.74	51.36
GSMUA_Achr7P14360_001	Banana	plastid	51.84	49.45
Solyc03g120760.2.1	Tomato	plasma membrane, plastid	54.93	48.88
KRH47030	Soybean	nucleus, plastid	53.77	48.77
PGSC0003DMT400006515	Potato	plastid	54.74	48.13
EES19240	Sorghum	cytosol, plasma membrane, plastid	52.03	46.22
HORVU1Hr1G030140.2	Barley	plastid	53.58	45.48
GSMUA_Achr10P...	Banana	cytosol	52.61	45.33
CDY39543	Canola	plastid	56.48	44.99
CDX77417	Canola	plastid	56.09	44.62
Os01t0227200-01	Rice	plasma membrane	51.45	44.56
Zm00001d039311_P001	Maize	mitochondrion	53.19	44.35
OQU86081	Sorghum	plastid	53.0	44.19
TraesCS1B01G147000.2	Wheat	plastid	52.22	43.76
TraesCS1D01G126300.1	Wheat	plastid	54.93	43.49
TraesCS3B01G179300.1	Wheat	plastid	52.8	43.26
TraesCS1A01G127900.1	Wheat	plastid	54.93	43.16
TraesCS3D01G160000.1	Wheat	plastid	52.61	43.04
TraesCS3A01G152200.1	Wheat	plastid	52.22	42.86
HORVU3Hr1G030900.1	Barley	plastid	51.84	42.61
CDY65603	Canola	plastid	50.87	42.56
Zm00001d010421_P002	Maize	plasma membrane	55.32	42.12
Os05t0218400-01	Rice	plasma membrane	54.55	41.78
Zm00001d037811_P001	Maize	plasma membrane	39.07	40.81
CDX76282	Canola	nucleus, plastid	51.84	40.54
CDY46249	Canola	nucleus, plastid	51.84	40.36
CDX75434	Canola	nucleus, plastid	51.06	39.29
CDX99312	Canola	nucleus, plastid	49.32	38.93
KRH47029	Soybean	plastid	41.39	38.77
CDY61983	Canola	cytosol, plastid	51.84	38.45
CDY48859	Canola	nucleus, plastid	50.87	38.39
CDX95494	Canola	nucleus, plastid	50.87	38.34
CDY48084	Canola	nucleus, plastid	50.87	38.34
CDY18547	Canola	nucleus, plastid	50.29	37.96
CDX82325	Canola	cytosol, plastid	52.03	37.73
CDX69059	Canola	endoplasmic reticulum, plasma membrane	50.1	36.27
CDY71995	Canola	nucleus, plastid	29.59	35.75
CDY01653	Canola	plastid	44.68	35.16
CDY59546	Canola	plastid	29.59	35.09
CDY41442	Canola	plastid	44.68	35.05
CDX74517	Canola	plastid	44.29	34.49
CDX91719	Canola	plastid	44.68	34.27
CDX68882	Canola	plastid	46.23	34.0
CDY03749	Canola	plastid	43.33	33.33
CDY46900	Canola	plasma membrane	47.39	33.15
CDY09439	Canola	plastid	43.33	32.8
CDY07370	Canola	plastid	41.39	32.13
CDY44156	Canola	nucleus	44.1	32.02
CDY59350	Canola	plastid	40.81	31.82
CDY04245	Canola	plastid	41.39	31.52
CDX93398	Canola	cytosol	42.94	31.05
CDY51639	Canola	nucleus	41.59	30.63
CDY37963	Canola	cytosol	42.36	30.37
CDY20615	Canola	cytosol	42.55	30.26
CDY20960	Canola	cytosol	42.55	30.22
CDY11592	Canola	plastid	41.97	29.52
CDY66134	Canola	nucleus	52.03	29.24
CDY47133	Canola	cytosol, plastid	41.97	28.86
CDY51224	Canola	plastid	52.42	28.65
CDX95997	Canola	plastid	40.43	28.47
CDX75728	Canola	cytosol	29.59	25.5
CDY16146	Canola	plastid	41.2	25.45
CDY10586	Canola	cytosol, nucleus, plasma membrane	29.4	25.17
CDY02454	Canola	cytosol, nucleus, plasma membrane	29.4	25.17
CDX82522	Canola	cytosol	30.95	24.35
CDY38610	Canola	plastid	41.39	24.29
CDY20711	Canola	cytosol, plasma membrane, plastid	28.05	21.9
CDY51732	Canola	cytosol	31.53	21.68
CDY55134	Canola	cytosol	31.53	21.68
CDY32758	Canola	plasma membrane	27.66	21.5
CDY23630	Canola	cytosol	30.56	21.32
CDX97507	Canola	cytosol, mitochondrion, nucleus	30.75	21.29
CDY32884	Canola	plasma membrane	23.98	20.06
CDY32921	Canola	plasma membrane	25.53	17.6
CDY32757	Canola	plasma membrane	22.05	16.08
CDY48704	Canola	cytosol, mitochondrion, plasma membrane, plastid	11.22	14.95

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.22	Gene3D:3.30.200.20	GO:A0A078ICG3	UniProt:A0A078ICG3	EnsemblPlants:CDY47531
ProteinID:CDY47531	ProteinID:CDY47531.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00087593001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF07714	ScanProsite:PS00107
PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF89	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	TMHMM:TMhelix	UniParc:UPI0004EF0AF3	SEG:seg	:

Description

BnaC03g69310DBnaC03g69310D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ICG3]

Coordinates

chrLK032720:-:24650..27512

Molecular Weight (calculated)

56268.2 Da

IEP (calculated)

6.590

GRAVY (calculated)

-0.401

Length

517 amino acids

Sequence
(BLAST)

001: MSSNNTIPSA ANPPDPVFPF TQPANTTTSS PSPPSPIEPS STPPFPAARA SDRGLAPGVL AGLITGAVLG ATFVLIGVCV FVCFYKRKKR KLQRRRDAEA
101: AINGDSPLPS LSDPKLDNRN NLQQWNQSTT SSDNVFTYQD LAKATDNFSS TNLIGQGGFG YVHKGVLTDG REVAIKQLKA GSGQGEREFQ AEIQTISRVH
201: HRHLVSLLGY CITGSQRLLV YEFVPNKTLE FHLHEKGRPV MEWGKRMKIA LGAAKGLSYL HEDCNPKTIH RDVKAANILI DDSYEAKLAD FGLARSSLDT
301: DTHVSTRIMG TFGYLAPEYA SSGKLTDKSD VFSFGVVLLE LITGRRPVDK SQPFVDDDSI VDWAKPLMIQ ALNDSNFDGL VDPRLEGNFD ISEMTRVVAC
401: AAASVRHSAK LRPKMSQIVR AFEGNLSLDD LTEGVTPGHS TIYSLDGSSD YSSTQYKEDL KKFKKMALES QTFGSSECSG LTTSDNGQNP SGSSSITEGL
501: RTTQEIEPEK KTDETIS

Best Arabidopsis Sequence Match ( AT1G52290.1 )
(BLAST)

001: MSTDTIPSLS SPPAPEFPST TPDTATSPAP SQPSIIGPSS LAPFPETTTN IDGGSRNVAL TGLITGVVLG ATFVLLGVCI FVCFYKRKKR KLKKKKKEDI
101: EASINRDSLD PKDDSNNLQQ WSSSEIGQNL FTYEDLSKAT SNFSNTNLLG QGGFGYVHRG VLVDGTLVAI KQLKSGSGQG EREFQAEIQT ISRVHHRHLV
201: SLLGYCITGA QRLLVYEFVP NKTLEFHLHE KERPVMEWSK RMKIALGAAK GLAYLHEDCN PKTIHRDVKA ANILIDDSYE AKLADFGLAR SSLDTDTHVS
301: TRIMGTFGYL APEYASSGKL TEKSDVFSIG VVLLELITGR RPVDKSQPFA DDDSIVDWAK PLMIQALNDG NFDGLVDPRL ENDFDINEMT RMVACAAASV
401: RHSAKRRPKM SQIVRAFEGN ISIDDLTEGA APGQSTIYSL DGSSDYSSTQ YKEDLKKFKK MAFESKTFGS SECSGLTSDN GQNPSGSSSI TEGQRTTQEI
501: EPEKNTKDT

Arabidopsis Description

PERK15Proline-rich receptor-like protein kinase PERK15 [Source:UniProtKB/Swiss-Prot;Acc:Q9C821]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.