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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:
  • nucleus 2
  • extracellular 4
  • endoplasmic reticulum 5
  • vacuole 4
  • plasma membrane 5
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:nucleus
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX75434 Canola nucleus, plastid 89.36 94.94
Bra011534.1-P Field mustard nucleus, plastid 89.22 94.79
AT4G34440.1 Thale cress plastid 76.89 81.94
CDX76282 Canola nucleus, plastid 74.65 80.64
CDY46249 Canola nucleus, plastid 74.93 80.57
CDX92276 Canola plasma membrane 45.66 67.92
VIT_03s0063g02440.t01 Wine grape plastid 37.68 63.59
CDX75275 Canola cytosol 29.97 60.8
CDX95494 Canola nucleus, plastid 55.6 57.87
GSMUA_Achr7P26790_001 Banana plastid 35.29 57.8
CDY18547 Canola nucleus, plastid 55.32 57.66
CDX99312 Canola nucleus, plastid 52.1 56.79
CDY61983 Canola cytosol, plastid 54.9 56.24
CDY48859 Canola nucleus, plastid 53.22 55.47
CDX82325 Canola cytosol, plastid 54.76 54.84
CDY48084 Canola nucleus, plastid 52.52 54.66
GSMUA_Achr5P02090_001 Banana nucleus 43.42 52.72
GSMUA_Achr4P10790_001 Banana plastid 46.5 52.12
GSMUA_Achr4P32080_001 Banana plastid 44.96 52.11
Zm00001d030218_P003 Maize plastid 40.34 51.71
Zm00001d028337_P003 Maize nucleus 41.88 51.29
KXG39820 Sorghum plastid 41.04 51.22
CDY39543 Canola plastid 46.5 51.16
KRH60853 Soybean cytosol, plastid 46.08 51.01
EER91832 Sorghum plastid 39.78 50.99
HORVU0Hr1G013830.4 Barley plastid 40.34 50.88
GSMUA_Achr7P00830_001 Banana plastid 43.7 50.81
CDX77417 Canola plastid 46.22 50.77
CDY02546 Canola plastid 36.41 50.68
TraesCS5A01G411300.1 Wheat plastid 40.62 50.61
CDY65603 Canola plastid 43.56 50.32
CDY47531 Canola plastid 36.27 50.1
CDY71995 Canola nucleus, plastid 29.69 49.53
Zm00001d034257_P002 Maize plastid 40.34 49.15
EER90803 Sorghum plastid 41.46 49.09
CDY59546 Canola plastid 29.83 48.85
HORVU2Hr1G061030.8 Barley plastid 36.41 48.78
GSMUA_Achr4P03200_001 Banana mitochondrion, plasma membrane 45.66 48.01
TraesCS5B01G415000.1 Wheat plastid 40.9 47.63
TraesCS4B01G233600.1 Wheat nucleus, plastid 40.62 46.93
Os07t0137800-00 Rice plasma membrane 35.29 46.84
Os10t0104800-01 Rice plastid 37.25 46.83
TraesCS4A01G077500.1 Wheat nucleus 40.62 46.7
Solyc10g051330.1.1 Tomato nucleus 38.24 45.5
EER97954 Sorghum plastid 36.13 45.1
CDY48706 Canola cytosol 32.49 43.94
PGSC0003DMT400062758 Potato nucleus 43.98 43.85
PGSC0003DMT400001868 Potato nucleus, plastid 41.18 43.11
Solyc11g044460.1.1 Tomato nucleus 43.7 42.62
Zm00001d007848_P001 Maize mitochondrion, plastid 36.13 42.43
Solyc01g109530.2.1 Tomato nucleus 41.18 42.12
CDY03749 Canola plastid 37.96 40.33
CDY41442 Canola plastid 36.69 39.76
CDY01653 Canola plastid 36.27 39.42
CDX68882 Canola plastid 38.8 39.4
CDX91719 Canola plastid 37.11 39.32
CDY09439 Canola plastid 37.53 39.24
CDX74517 Canola plastid 36.27 39.01
CDY44156 Canola nucleus 37.96 38.06
CDY51639 Canola nucleus 36.13 36.75
CDY11592 Canola plastid 37.82 36.73
CDY47133 Canola cytosol, plastid 38.1 36.17
CDY04245 Canola plastid 34.03 35.79
CDY07370 Canola plastid 33.33 35.74
CDY59350 Canola plastid 32.77 35.29
CDX93398 Canola cytosol 35.15 35.1
CDY20960 Canola cytosol 35.57 34.89
CDY20615 Canola cytosol 35.29 34.66
CDY37963 Canola cytosol 34.87 34.54
CDX95997 Canola plastid 35.15 34.2
CDY66134 Canola nucleus 43.84 34.02
HORVU4Hr1G065270.7 Barley cytosol 23.39 33.94
CDY51224 Canola plastid 44.4 33.51
CDY16146 Canola plastid 35.71 30.47
CDY46900 Canola plasma membrane 30.25 29.23
CDY38610 Canola plastid 35.15 28.49
CDX75728 Canola cytosol 23.53 28.0
CDY10586 Canola cytosol, nucleus, plasma membrane 23.53 27.81
CDY02454 Canola cytosol, nucleus, plasma membrane 23.39 27.65
CDX82522 Canola cytosol 24.79 26.94
CDY20711 Canola cytosol, plasma membrane, plastid 24.37 26.28
CDY32758 Canola plasma membrane 24.09 25.86
CDY23630 Canola cytosol 25.35 24.43
CDY51732 Canola cytosol 25.63 24.34
CDY55134 Canola cytosol 25.63 24.34
CDX97507 Canola cytosol, mitochondrion, nucleus 25.21 24.1
CDY32884 Canola plasma membrane 20.31 23.46
CDY32921 Canola plasma membrane 21.43 20.4
CDY32757 Canola plasma membrane 18.35 18.48
CDY48704 Canola cytosol, mitochondrion, plasma membrane, plastid 9.8 18.04
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
MapMan:18.4.1.22Gene3D:3.30.200.20GO:A0A078BYR4EnsemblPlants:CDX69059ProteinID:CDX69059ProteinID:CDX69059.1
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488
GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00130828001InterPro:IPR000719InterPro:Kinase-like_dom_sf
PFAM:PF07714PIRSF:PIRSF000641ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27001
PANTHER:PTHR27001:SF285InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220InterPro:SRK-like_kinaseSUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_ASTMHMM:TMhelixUniParc:UPI0004EE68C1SEG:seg:
Description
BnaC01g03940D
Coordinates
chrLK031789:+:2706626..2709868
Molecular Weight (calculated)
76266.4 Da
IEP (calculated)
7.141
GRAVY (calculated)
-0.573
Length
714 amino acids
Sequence
(BLAST)
001: MMEKERNICF LIIELSLFLG ESYFSNPQKV SITIPISLSN FQTIISFTTR ITGDKGTGSP PNKTSPPVAP VSSPPAPDSA PPPTNNSSAS SPPPAPPSQE
101: TLPPPSPPPS PPVAGNPPPK TPENPSPPSP EVKTPVTPPA PPQPPANQSP PSQRPTPPSP GANEDRNRTT GGGNNNNNNG NNRDGSTPSP PSGNNRNSSG
201: GGSPSPPRSI SPPRNSEGSD SSSSSPGENH YQANVGLIIG VLVGAGLLLL LLVLICICCK KKKKKRDPQV NHLHYYNNSP FGAPNGNGGY YNNGTPQDHV
301: VNMGGGNWVP QQPVSGPHSD TSNLAGPTPS PQAATLGHNQ STFTYDELSI ATEGFAQSNL LGQGGFGYVH KGVLPGGKEV AVKSLKVGSG QGEREFQAEV
401: EIISRVHHRH LVSLVGYCIS GGQRLLVYEF LPNNTLEFHL YGKGRPVLEW SIRLKIALGS ARGLAYLHED CHPKIIHRDI KAANILLDFS FETKVADFGL
501: AKLSQDNYTH VSTRVMGTFG YLAPEYASSG KLSDKSDVFS FGVMLLELIT GRPPVDLTGE MEDSLVDWAR PLCMKAAQDG DYSQLADPRL ETSYNQQEMA
601: QMASCAAAAI SHSARRRPKM SQIVRALEGD MSMEDLNEGG RPGQNSYLSP GGMTSEYDAS SYSADMKKIR KLALETKEYQ SSEYGATSEY GLHPSASSSE
701: EMHRGSSMRR NSQL
Best Arabidopsis Sequence Match ( AT4G34440.2 )
(BLAST)
001: MADSPVDSSP APETSNGTPP SNGTSPSNES SPPTPPSSPP PSSISAPPPD ISASFSPPPA PPTQETSPPT SPSSSPPVVA NPSPQTPENP SPPAPEGSTP
101: VTPPAPPQTP SNQSPERPTP PSPGANDDRN RTNGGNNNRD GSTPSPPSSG NRTSGDGGSP SPPRSISPPQ NSGDSDSSSG NHPQANIGLI IGVLVGAGLL
201: LLLAVCICIC CNRKKKKKSP QVNHMHYYNN NPYGGAPSGN GGYYKGTPQD HVVNMAGQGG GNWGPQQPVS GPHSDASNLT GRTAIPSPQA ATLGHNQSTF
301: TYDELSIATE GFAQSNLLGQ GGFGYVHKGV LPSGKEVAVK SLKLGSGQGE REFQAEVDII SRVHHRHLVS LVGYCISGGQ RLLVYEFIPN NTLEFHLHGK
401: GRPVLDWPTR VKIALGSARG LAYLHEDCHP RIIHRDIKAA NILLDFSFET KVADFGLAKL SQDNYTHVST RVMGTFGYLA PEYASSGKLS DKSDVFSFGV
501: MLLELITGRP PLDLTGEMED SLVDWARPLC LKAAQDGDYN QLADPRLELN YSHQEMVQMA SCAAAAIRHS ARRRPKMSQI VRALEGDMSM DDLSEGTRPG
601: QSTYLSPGSV SSEYDASSYT ADMKKFKKLA LENKEYQSSE YGGTSEYGLN PSASSSEEMN RGSMKRNPQL
Arabidopsis Description
PERK5PERK5 [Source:UniProtKB/TrEMBL;Acc:A0A178V2W8]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.