CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra037220.1-P	Field mustard	nucleus	94.13	94.54
CDY51224	Canola	plastid	94.35	91.75
CDY59546	Canola	plastid	40.76	86.01
CDY71995	Canola	nucleus, plastid	40.0	85.98
CDY65603	Canola	plastid	57.72	85.92
AT2G18470.3	Thale cress	plastid	57.07	82.94
VIT_04s0023g01570.t01	Wine grape	nucleus	33.15	67.48
CDX92276	Canola	plasma membrane	31.74	60.83
GSMUA_Achr7P26790_001	Banana	plastid	28.59	60.32
CDX75275	Canola	cytosol	21.96	57.39
GSMUA_Achr5P02090_001	Banana	nucleus	36.41	56.97
GSMUA_Achr4P32080_001	Banana	plastid	36.09	53.9
KRH28656	Soybean	nucleus, plastid	36.96	53.8
KRH76796	Soybean	nucleus, plastid	36.96	53.63
GSMUA_Achr7P00830_001	Banana	plastid	35.65	53.42
CDY02546	Canola	plastid	29.13	52.24
Zm00001d028337_P003	Maize	nucleus	33.04	52.14
CDY47531	Canola	plastid	29.24	52.03
Zm00001d030218_P003	Maize	plastid	31.2	51.53
HORVU0Hr1G013830.4	Barley	plastid	31.63	51.41
KXG39820	Sorghum	plastid	31.96	51.4
KRH08293	Soybean	nucleus	33.26	51.09
GSMUA_Achr4P10790_001	Banana	plastid	35.33	51.02
CDY39543	Canola	plastid	35.76	50.69
KRH69932	Soybean	plastid	33.48	50.66
EER91832	Sorghum	plastid	30.65	50.63
CDX77417	Canola	plastid	35.76	50.62
TraesCS5A01G411300.1	Wheat	plastid	31.41	50.44
HORVU2Hr1G061030.8	Barley	plastid	29.13	50.28
Os10t0104800-01	Rice	plastid	30.98	50.18
EER90803	Sorghum	plastid	32.61	49.75
Zm00001d034257_P002	Maize	plastid	31.63	49.66
GSMUA_Achr4P03200_001	Banana	mitochondrion, plasma membrane	36.63	49.63
TraesCS4B01G233600.1	Wheat	nucleus, plastid	33.26	49.51
CDY48084	Canola	nucleus, plastid	36.85	49.42
EER97954	Sorghum	plastid	30.65	49.3
CDX95494	Canola	nucleus, plastid	36.74	49.27
CDY18547	Canola	nucleus, plastid	36.63	49.2
CDY48859	Canola	nucleus, plastid	36.63	49.2
CDX99312	Canola	nucleus, plastid	34.67	48.7
TraesCS4A01G077500.1	Wheat	nucleus	32.83	48.63
PGSC0003DMT400038554	Potato	nucleus, plastid	26.09	48.58
Os07t0137800-00	Rice	plasma membrane	28.37	48.51
CDX76282	Canola	nucleus, plastid	34.78	48.41
CDY46249	Canola	nucleus, plastid	34.78	48.19
CDY61983	Canola	cytosol, plastid	36.41	48.06
CDX75434	Canola	nucleus, plastid	34.89	47.77
Solyc02g085430.2.1	Tomato	nucleus, plastid	31.63	47.7
PGSC0003DMT400040010	Potato	nucleus, plastid	33.26	47.59
Zm00001d007848_P001	Maize	mitochondrion, plastid	31.09	47.04
TraesCS5B01G415000.1	Wheat	plastid	31.2	46.82
CDX82325	Canola	cytosol, plastid	36.2	46.7
Solyc02g062790.2.1	Tomato	nucleus	33.15	46.64
PGSC0003DMT400045839	Potato	cytosol, plastid	35.11	44.37
CDX69059	Canola	endoplasmic reticulum, plasma membrane	34.02	43.84
Solyc03g034060.2.1	Tomato	cytosol, plastid	35.22	43.55
CDY48706	Canola	cytosol	24.02	41.86
CDY41442	Canola	plastid	27.5	38.39
CDX91719	Canola	plastid	27.83	37.98
CDY03749	Canola	plastid	27.5	37.65
CDY01653	Canola	plastid	26.63	37.29
CDY09439	Canola	plastid	27.61	37.19
CDX74517	Canola	plastid	26.63	36.9
CDY44156	Canola	nucleus	27.72	35.81
CDX68882	Canola	plastid	27.17	35.56
CDY04245	Canola	plastid	26.09	35.35
CDY07370	Canola	plastid	25.43	35.14
CDY59350	Canola	plastid	25.0	34.69
CDY51639	Canola	nucleus	26.41	34.62
CDY11592	Canola	plastid	27.17	34.01
CDX93398	Canola	cytosol	26.41	33.99
HORVU4Hr1G065270.7	Barley	cytosol	18.15	33.94
CDY37963	Canola	cytosol	26.41	33.7
CDY47133	Canola	cytosol, plastid	27.5	33.64
CDY20960	Canola	cytosol	26.52	33.52
CDY20615	Canola	cytosol	26.09	33.01
CDX95997	Canola	plastid	25.98	32.56
CDY16146	Canola	plastid	26.74	29.39
CDY46900	Canola	plasma membrane	22.72	28.28
CDY38610	Canola	plastid	26.96	28.15
CDY10586	Canola	cytosol, nucleus, plasma membrane	17.5	26.66
CDY02454	Canola	cytosol, nucleus, plasma membrane	17.39	26.49
CDX75728	Canola	cytosol	17.17	26.33
CDX82522	Canola	cytosol	17.83	24.96
CDY20711	Canola	cytosol, plasma membrane, plastid	17.28	24.02
CDY32758	Canola	plasma membrane	17.28	23.91
CDY23630	Canola	cytosol	18.59	23.08
CDX97507	Canola	cytosol, mitochondrion, nucleus	18.48	22.76
CDY51732	Canola	cytosol	18.48	22.61
CDY55134	Canola	cytosol	18.48	22.61
CDY32884	Canola	plasma membrane	14.67	21.84
CDY32921	Canola	plasma membrane	15.43	18.93
CDY32757	Canola	plasma membrane	14.35	18.62
CDY48704	Canola	cytosol, mitochondrion, plasma membrane, plastid	7.5	17.78

Protein Annotations

Gene3D:1.10.287.110	Gene3D:1.10.510.10	MapMan:18.4.1.22	Gene3D:3.30.200.20	GO:A0A078JHH6	UniProt:A0A078JHH6
EnsemblPlants:CDY66134	ProteinID:CDY66134	ProteinID:CDY66134.1	ncoils:Coil	InterPro:DnaJ_domain	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00052141001	InterPro:IPR000719
InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	InterPro:Kinase-like_dom_sf	PFAM:PF00226	PFAM:PF07714
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50076	PANTHER:PTHR27001	PANTHER:PTHR27001:SF285
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI0004EE0C63	SEG:seg	:

Description

BnaCnng49640DBnaCnng49640D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JHH6]

Coordinates

chrLK035099:+:7832..17208

Molecular Weight (calculated)

99123.9 Da

IEP (calculated)

9.426

GRAVY (calculated)

-0.671

Length

920 amino acids

Sequence
(BLAST)

001: MASSPESAPP PSNSSSSPSP PSPSPPPPTQ EGSSPPPPDS TSPPAPQAPS PPDSSNNSPP PPASQGGGGN GGGNESPPSR GSPPSPPSRD GDNGGSRTSP
101: SGDNGGSRSN NSPSSGGGSS TSGGGSGTNG GGGGGGINTN TAIIIGVLAG AGLLMIVLII VCLRRRRKSK DSFDAESMKG NTIYTHMRLC LHQINNASQN
201: YPNWHLNSQG QNQQPSGGWG GGGPSPPPPP RMPTSGDNSS LYSGPARPVL PPPPPTLALG FNKSTFTYQE LADATGGFVD SNLLGQGGFG YVHKGVLPNG
301: KEVAVKSLKS GSGQGEREFQ AEVDIISRVH HRYLVSLVGY CIADGQRMLV YEFVPNNTLE YHLHGKNLPV MDFSTRMRIA LGSAKGLAYL HEDCHPRIIH
401: RDIKSANILL DFNFDAMVAD FGLAKLTSDN YTHVSTRVMG TFGYLAPEYA SSGKLTEKSD VFSYGVMLLE LITGKRPVDS SSTMDDTLVD WARPIMVRAL
501: EEGNFNELAD VRLEGNYNPQ EMARMVTCAA ASIRHSGRKR PKMSQIVRAL EGEVSLDVLY EGVKPGHSNI YGTSGTSSDY SQTSYNADMK KFRQIALSSQ
601: DFQSSEEAVT EPDPFSHPLS VPLLPQILKL HKNPQIGDFS ISLLFPNLTM LRLRTLLSLK SSFSSPSAAT KTILAPFHST SVLSEKSRKH FGSDRASKGG
701: GGTTSESSKN SSSIRFTCTV KEKGRRTCAK KTVDKLLFHS GLNDPLQNEW NIGPNPLIRD RHMKKKSPPG RGKKPRDKKT KRWHREGNTD DDFEADATNK
801: FENKWREAWT NQSQKSSYSY SRDSGFQWRE GWSWTTQSQR SKAWNNDHCD EPLVVGSQSD RKALGLPLTG PLKLEDVKNA YRSSAKKWHP DTNQGTSKAE
901: AQEKFKLCVE AYNSLCSALS

Best Arabidopsis Sequence Match ( AT2G18470.1 )
(BLAST)

001: MASSPESAPP TNSTSSPSPP SNTNSTTSSP PAPSPPSPTP PQGDSSSSPP PDSTSPPAPQ APNPPNSSNN SPSPPSQGGG GERGNGGNNG GNDTPPSRGS
101: PPSPPSRSNG DNGGSRSSPP GDTGGSRSDN PPSSGGSSGG GGGGRSNTNT AIIVGVLVGA GLLMIVLIIV CLRRKKKRKD SFYPEPMKGN QYQYYGNNNN
201: NNASQNYPNW HLNSQGQNQQ STGGWGGGGP SPPPPPRMPT SGEDSSMYSG PSRPVLPPPS PALALGFNKS TFTYQELAAA TGGFTDANLL GQGGFGYVHK
301: GVLPSGKEVA VKSLKAGSGQ GEREFQAEVD IISRVHHRYL VSLVGYCIAD GQRMLVYEFV PNKTLEYHLH GKNLPVMEFS TRLRIALGAA KGLAYLHEDC
401: HPRIIHRDIK SANILLDFNF DAMVADFGLA KLTSDNNTHV STRVMGTFGY LAPEYASSGK LTEKSDVFSY GVMLLELITG KRPVDNSITM DDTLVDWARP
501: LMARALEDGN FNELADARLE GNYNPQEMAR MVTCAAASIR HSGRKRPKMS QIVRALEGEV SLDALNEGVK PGHSNVYGSL GASSDYSQTS YNADMKKFRQ
601: IALSSQEFPV SDCEGTSSND SRDMGTKSPT PPK

Arabidopsis Description

PERK4Proline-rich receptor-like protein kinase PERK4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZNQ8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.