Factsheet for VIT_04s0023g01570.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_03s0063g02440.t01	Wine grape	plastid	63.5	67.85
GSMUA_Achr7P26790_001	Banana	plastid	59.29	61.47
VIT_14s0083g00330.t01	Wine grape	plasma membrane	50.44	52.29
GSMUA_Achr5P02090_001	Banana	nucleus	64.82	49.83
KRH08293	Soybean	nucleus	65.04	49.08
HORVU2Hr1G061030.8	Barley	plastid	57.74	48.97
GSMUA_Achr4P32080_001	Banana	plastid	66.59	48.86
VIT_09s0002g04210.t01	Wine grape	plastid	58.85	48.28
GSMUA_Achr7P00830_001	Banana	plastid	65.49	48.21
Zm00001d030218_P003	Maize	plastid	59.29	48.11
HORVU0Hr1G013830.4	Barley	plastid	60.18	48.06
Bra039607.1-P	Field mustard	nucleus	64.82	48.03
KRH76796	Soybean	nucleus, plastid	67.26	47.95
EER91832	Sorghum	plastid	58.85	47.76
KRH28656	Soybean	nucleus, plastid	66.59	47.63
CDY65603	Canola	plastid	65.04	47.57
AT2G18470.3	Thale cress	plastid	66.59	47.55
KRH69932	Soybean	plastid	63.5	47.2
TraesCS5A01G411300.1	Wheat	plastid	59.51	46.95
KXG39820	Sorghum	plastid	58.63	46.33
Zm00001d028337_P003	Maize	nucleus	59.73	46.31
GSMUA_Achr4P10790_001	Banana	plastid	65.27	46.31
Zm00001d034257_P002	Maize	plastid	59.51	45.9
EER90803	Sorghum	plastid	61.06	45.77
Os10t0104800-01	Rice	plastid	57.3	45.6
Os07t0137800-00	Rice	plasma membrane	54.2	45.54
VIT_01s0127g00890.t01	Wine grape	mitochondrion	26.33	44.91
VIT_11s0016g03880.t01	Wine grape	plastid	64.38	44.77
GSMUA_Achr4P03200_001	Banana	mitochondrion, plasma membrane	66.59	44.33
TraesCS5B01G415000.1	Wheat	plastid	59.96	44.21
PGSC0003DMT400040010	Potato	nucleus, plastid	61.73	43.39
Solyc02g085430.2.1	Tomato	nucleus, plastid	58.19	43.11
TraesCS4B01G233600.1	Wheat	nucleus, plastid	58.85	43.04
EER97954	Sorghum	plastid	54.2	42.83
Solyc02g062790.2.1	Tomato	nucleus	61.95	42.81
TraesCS4A01G077500.1	Wheat	nucleus	58.63	42.67
CDY71995	Canola	nucleus, plastid	40.04	42.29
CDY59546	Canola	plastid	40.04	41.51
PGSC0003DMT400038554	Potato	nucleus, plastid	45.35	41.5
Zm00001d007848_P001	Maize	mitochondrion, plastid	54.65	40.62
PGSC0003DMT400045839	Potato	cytosol, plastid	62.61	38.87
Solyc03g034060.2.1	Tomato	cytosol, plastid	62.39	37.9
VIT_01s0127g00670.t01	Wine grape	plastid	50.88	34.23
HORVU4Hr1G065270.7	Barley	cytosol	36.73	33.74
VIT_13s0067g01620.t01	Wine grape	cytosol, plastid	28.98	33.42
Bra037220.1-P	Field mustard	nucleus	67.26	33.19
CDY66134	Canola	nucleus	67.48	33.15
CDY51224	Canola	plastid	67.92	32.45
VIT_01s0011g02460.t01	Wine grape	plastid	49.78	30.99
VIT_09s0002g02420.t01	Wine grape	cytosol	38.72	23.43
VIT_11s0016g02430.t01	Wine grape	plasma membrane	36.5	21.91
VIT_18s0001g11590.t01	Wine grape	cytosol	33.41	20.89
VIT_18s0001g14990.t01	Wine grape	cytosol, nucleus, peroxisome	29.2	16.88

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100265084	wikigene:100265084	MapMan:18.4.1.22	Gene3D:3.30.200.20	ProteinID:CCB44461
ProteinID:CCB44461.1	UniProt:F6GWX5	EMBL:FN594959	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009719	GO:GO:0009738	GO:GO:0009791	GO:GO:0009845	GO:GO:0009987	GO:GO:0016020
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0019722	GO:GO:0038023	GO:GO:0048364
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100265084	wikigene:LOC100265084	PFAM:PF07714	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF192	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002109A25	ArrayExpress:VIT_04s0023g01570
EnsemblPlantsGene:VIT_04s0023g01570	EnsemblPlants:VIT_04s0023g01570.t01	RefSeq:XP_002267433	RefSeq:XP_002267433.2	SEG:seg	:

Description

No Description!

Coordinates

chr4:+:18102394..18105221

Molecular Weight (calculated)

49839.6 Da

IEP (calculated)

6.269

GRAVY (calculated)

-0.518

Length

452 amino acids

Sequence
(BLAST)

001: MRQEEEEKKP TGESGDAISI ESIGSQQSNW YNSPQSADHV VKLHQPPGGG WAPPPPPMIS SGDMSSNYSG PRHPPLPPPS PNLALGFNKS TFTYEELAAA
101: TGGFAQANLL GQGGFGYVHK GVLPNGKEIA VKSLKSGSGQ GEREFQAEVE IISRVHHRHL VSLVGYCIAD GQRMLVYEFV HNKTLEHHLH GNGRPIMDWA
201: SRMRIALGSA KGLAYLHEDC HPKIIHRDIK TANILLDYNF EAMVADFGLA KLSTDNCTHV STRVMGTFGY LAPEYASSGK LTEKSDVFSY GVMLLELITG
301: RRPVDNAIFE ESLVDWARPL LSRALADGNY DELVDRFLEN NYNTQEMARM VACAAASIRH SAKRRPKMSQ IVRALEGDVS LEDLNDVTKT NQSPAYSTSM
401: SSEYNTRMYN ADMEKFKKMA LSSQEFGSSE DGTSEYGQNP SSSDNSQEMI HR

Best Arabidopsis Sequence Match ( AT2G18470.1 )
(BLAST)

001: MASSPESAPP TNSTSSPSPP SNTNSTTSSP PAPSPPSPTP PQGDSSSSPP PDSTSPPAPQ APNPPNSSNN SPSPPSQGGG GERGNGGNNG GNDTPPSRGS
101: PPSPPSRSNG DNGGSRSSPP GDTGGSRSDN PPSSGGSSGG GGGGRSNTNT AIIVGVLVGA GLLMIVLIIV CLRRKKKRKD SFYPEPMKGN QYQYYGNNNN
201: NNASQNYPNW HLNSQGQNQQ STGGWGGGGP SPPPPPRMPT SGEDSSMYSG PSRPVLPPPS PALALGFNKS TFTYQELAAA TGGFTDANLL GQGGFGYVHK
301: GVLPSGKEVA VKSLKAGSGQ GEREFQAEVD IISRVHHRYL VSLVGYCIAD GQRMLVYEFV PNKTLEYHLH GKNLPVMEFS TRLRIALGAA KGLAYLHEDC
401: HPRIIHRDIK SANILLDFNF DAMVADFGLA KLTSDNNTHV STRVMGTFGY LAPEYASSGK LTEKSDVFSY GVMLLELITG KRPVDNSITM DDTLVDWARP
501: LMARALEDGN FNELADARLE GNYNPQEMAR MVTCAAASIR HSGRKRPKMS QIVRALEGEV SLDALNEGVK PGHSNVYGSL GASSDYSQTS YNADMKKFRQ
601: IALSSQEFPV SDCEGTSSND SRDMGTKSPT PPK

Arabidopsis Description

PERK4Proline-rich receptor-like protein kinase PERK4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZNQ8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.