Factsheet for PGSC0003DMT400045839

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
plasma membrane 1
cytosol 2
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g034060.2.1	Tomato	cytosol, plastid	92.45	90.46
PGSC0003DMT400040010	Potato	nucleus, plastid	55.63	62.99
VIT_04s0023g01570.t01	Wine grape	nucleus	38.87	62.61
GSMUA_Achr7P26790_001	Banana	plastid	36.68	61.24
PGSC0003DMT400038554	Potato	nucleus, plastid	40.66	59.92
KRH76796	Soybean	nucleus, plastid	46.98	53.94
Zm00001d030218_P003	Maize	plastid	40.8	53.32
AT2G18470.3	Thale cress	plastid	46.29	53.24
Bra039607.1-P	Field mustard	nucleus	44.23	52.79
CDY65603	Canola	plastid	44.78	52.75
Zm00001d028337_P003	Maize	nucleus	42.17	52.66
GSMUA_Achr5P02090_001	Banana	nucleus	42.45	52.55
KRH28656	Soybean	nucleus, plastid	45.6	52.53
KXG39820	Sorghum	plastid	41.21	52.45
EER91832	Sorghum	plastid	39.97	52.24
GSMUA_Achr4P10790_001	Banana	plastid	44.78	51.18
KRH69932	Soybean	plastid	42.72	51.15
KRH08293	Soybean	nucleus	42.03	51.09
Os10t0104800-01	Rice	plastid	39.7	50.88
CDY71995	Canola	nucleus, plastid	29.67	50.47
GSMUA_Achr7P00830_001	Banana	plastid	42.45	50.33
HORVU0Hr1G013830.4	Barley	plastid	39.01	50.18
GSMUA_Achr4P32080_001	Banana	plastid	42.45	50.16
CDY59546	Canola	plastid	29.95	50.0
PGSC0003DMT400001024	Potato	plastid	47.66	49.78
EER90803	Sorghum	plastid	40.93	49.42
TraesCS4A01G077500.1	Wheat	nucleus	42.03	49.28
TraesCS4B01G233600.1	Wheat	nucleus, plastid	41.76	49.19
GSMUA_Achr4P03200_001	Banana	mitochondrion, plasma membrane	45.6	48.9
TraesCS5A01G411300.1	Wheat	plastid	38.46	48.87
EER97954	Sorghum	plastid	38.32	48.78
Zm00001d034257_P002	Maize	plastid	39.15	48.63
HORVU2Hr1G061030.8	Barley	plastid	35.44	48.41
PGSC0003DMT400006515	Potato	plastid	38.46	47.62
Os07t0137800-00	Rice	plasma membrane	34.2	46.28
PGSC0003DMT400062758	Potato	nucleus	45.47	46.23
Zm00001d007848_P001	Maize	mitochondrion, plastid	38.46	46.05
TraesCS5B01G415000.1	Wheat	plastid	38.05	45.19
PGSC0003DMT400001868	Potato	nucleus, plastid	42.03	44.87
PGSC0003DMT400037638	Potato	plastid	35.03	43.97
PGSC0003DMT400026193	Potato	plastid	38.19	40.76
PGSC0003DMT400064597	Potato	plastid	39.42	38.52
PGSC0003DMT400019290	Potato	mitochondrion	36.68	38.36
PGSC0003DMT400041343	Potato	plastid	38.74	38.16
Bra037220.1-P	Field mustard	nucleus	44.64	35.48
CDY66134	Canola	nucleus	44.37	35.11
HORVU4Hr1G065270.7	Barley	cytosol	23.49	34.76
CDY51224	Canola	plastid	44.64	34.36
PGSC0003DMT400083900	Potato	cytosol, nucleus, peroxisome	22.94	28.6
PGSC0003DMT400024762	Potato	cytosol, plasma membrane, plastid	23.63	25.75
PGSC0003DMT400006664	Potato	cytosol	25.82	25.51
PGSC0003DMT400008513	Potato	cytosol, plasma membrane, plastid	20.19	22.93
PGSC0003DMT400008632	Potato	mitochondrion	21.29	21.65

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102580616	MapMan:18.4.1.22	Gene3D:3.30.200.20	InterPro:Adeno_E3_CR2	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1BIA2	PFAM:PF02439	PFAM:PF07714	EnsemblPlantsGene:PGSC0003DMG400017779
PGSC:PGSC0003DMG400017779	EnsemblPlants:PGSC0003DMT400045839	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF192	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI000296D794	RefSeq:XP_006366995.2	RefSeq:XP_015160673.1	SEG:seg

Description

Proline-rich receptor kinase PERK7 [Source:PGSC_GENE;Acc:PGSC0003DMG400017779]

Coordinates

chr3:-:4372280..4377014

Molecular Weight (calculated)

76965.6 Da

IEP (calculated)

5.684

GRAVY (calculated)

-0.695

Length

728 amino acids

Sequence
(BLAST)

001: MEDSSPSPSN SSSSSPPLDS SPPPSPPESS PPPPKSDSSS PPPPKSDSSS PSPPPSKSDS PSPPPPESSP PPKSDSSPPP PSPNQSPPPK SESSPPPASP
101: PPTESSPPPP SSTNFSPPSP KSSDSSPSDD NDNPNTQSPP PSLNSSSSSP PPTTNTKPSP SKNTFFNEPN SPPSSTFSPP TPESSLFPSE KALPTFPPSR
201: DNASSNKSPG NSLGSNNSPP HEQSSSSTVA IVAAVSVTGL LILAVVIVCL LCNRKKKKQP YYVDPAHPPK GGDPYYNTGN YSSPHTDHIV TLAPPPGVMG
301: TPQEGGRGWT PPPPPPAANT SSEFSSGYSS HVPGGGPATI PSPNYGGLSK IQFTYADLAT ATGGFSEANV LGQGGFGFVH KGVLTDGSVV AVKSLKSGSG
401: QGEREFQAEV EIISRVHHRH LVSLVGYCIA DGQRMLVYEF VSNGTLEYHL HGKGRPVMDW GLRLKIALGS AKGLAYLHED CHPRIIHRDI KGANILLDNN
501: YEAMVADFGL AKLTEDNNTH VSTRVMGTFG YLAPEYASSG KLSEKSDVFS FGVMLLELIT GRRPLDTTNK LMDDSLVDWA RPFLTKALEE NNYDELVDPR
601: LEGNYDPDEL QRMVACAAAS VRHSARRRPK MSQILRALDG DSSLEDLNEK AGKNNTANFG GASGPASDLY DTCAYNADMV KFRQMVMTSQ DMNSSEYGNT
701: SDYGLHPSDT SSEFSSDYNH SGAHKQAK

Best Arabidopsis Sequence Match ( AT2G18470.1 )
(BLAST)

001: MASSPESAPP TNSTSSPSPP SNTNSTTSSP PAPSPPSPTP PQGDSSSSPP PDSTSPPAPQ APNPPNSSNN SPSPPSQGGG GERGNGGNNG GNDTPPSRGS
101: PPSPPSRSNG DNGGSRSSPP GDTGGSRSDN PPSSGGSSGG GGGGRSNTNT AIIVGVLVGA GLLMIVLIIV CLRRKKKRKD SFYPEPMKGN QYQYYGNNNN
201: NNASQNYPNW HLNSQGQNQQ STGGWGGGGP SPPPPPRMPT SGEDSSMYSG PSRPVLPPPS PALALGFNKS TFTYQELAAA TGGFTDANLL GQGGFGYVHK
301: GVLPSGKEVA VKSLKAGSGQ GEREFQAEVD IISRVHHRYL VSLVGYCIAD GQRMLVYEFV PNKTLEYHLH GKNLPVMEFS TRLRIALGAA KGLAYLHEDC
401: HPRIIHRDIK SANILLDFNF DAMVADFGLA KLTSDNNTHV STRVMGTFGY LAPEYASSGK LTEKSDVFSY GVMLLELITG KRPVDNSITM DDTLVDWARP
501: LMARALEDGN FNELADARLE GNYNPQEMAR MVTCAAASIR HSGRKRPKMS QIVRALEGEV SLDALNEGVK PGHSNVYGSL GASSDYSQTS YNADMKKFRQ
601: IALSSQEFPV SDCEGTSSND SRDMGTKSPT PPK

Arabidopsis Description

PERK4Proline-rich receptor-like protein kinase PERK4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZNQ8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.