Factsheet for PGSC0003DMT400019290

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
plastid 3
plasma membrane 1
cytosol 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

mitochondrion: 24351685

msms PMID: 24351685 doi

F Salvato, JF Havelund, M Chen, RS Rao, A Rogowska-Wrzesinska, ON Jensen, DR Gang, JJ Thelen, IM Møller

Department of Biochemistry and Interdisciplinary Plant Group, University of Missouri, Columbia, Missouri 65211.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g006930.2.1	Tomato	plastid	89.08	77.5
Os05t0100700-02	Rice	plasma membrane	24.57	65.02
Bra004022.1-P	Field mustard	plastid	36.21	64.78
PGSC0003DMT400064597	Potato	plastid	65.09	60.81
GSMUA_Achr8P29720_001	Banana	mitochondrion	34.63	60.4
KRH07595	Soybean	plastid	45.11	59.02
TraesCS1B01G001500.1	Wheat	plastid	29.6	57.38
TraesCS3D01G005400.1	Wheat	cytosol	32.47	56.36
PGSC0003DMT400041343	Potato	plastid	57.76	54.4
VIT_01s0011g02460.t01	Wine grape	plastid	55.89	53.58
GSMUA_Achr1P25240_001	Banana	mitochondrion	35.49	51.57
PGSC0003DMT400026193	Potato	plastid	50.43	51.47
CDY07370	Canola	plastid	48.71	50.9
KRH71097	Soybean	plastid	53.59	50.41
CDY04245	Canola	plastid	48.85	50.07
KRH75567	Soybean	plastid	51.15	50.0
GSMUA_Achr4P24400_001	Banana	plastid	47.41	49.92
GSMUA_Achr2P09600_001	Banana	plastid	46.98	49.77
AT1G68690.2	Thale cress	plastid	50.57	49.72
CDY59350	Canola	plastid	47.27	49.62
GSMUA_Achr2P14510_001	Banana	plastid	46.41	49.16
Zm00001d035774_P001	Maize	plastid	41.81	48.91
GSMUA_Achr10P...	Banana	plastid	49.14	47.7
CDX95997	Canola	plastid	49.86	47.28
AT1G26150.1	Thale cress	plastid	51.44	46.98
KXG20993	Sorghum	plastid	40.8	46.86
KXG32101	Sorghum	plastid	46.98	46.78
Zm00001d040127_P001	Maize	plasma membrane	46.26	46.6
Os01t0110500-01	Rice	plasma membrane	45.26	45.13
HORVU3Hr1G070200.1	Barley	plastid	43.68	45.04
TraesCS3A01G003900.1	Wheat	plastid	44.4	44.98
HORVU3Hr1G000770.2	Barley	plastid	44.25	44.96
TraesCS3B01G008600.2	Wheat	plastid	44.25	44.9
TraesCS3A01G278100.1	Wheat	plastid	43.53	44.89
EES01447	Sorghum	plastid	43.39	44.74
Os01t0738300-01	Rice	cytosol	43.1	44.71
Zm00001d012774_P001	Maize	cytosol, plastid	42.82	44.61
TraesCS3B01G312300.1	Wheat	plastid	43.25	44.46
Zm00001d008433_P007	Maize	plastid	46.55	44.38
TraesCS3D01G278400.1	Wheat	cytosol, plastid	43.1	44.38
PGSC0003DMT400038554	Potato	nucleus, plastid	31.47	44.33
Zm00001d043562_P008	Maize	cytosol	42.82	43.5
TraesCS1D01G004300.1	Wheat	plastid	40.95	43.45
HORVU1Hr1G000090.3	Barley	plastid	40.8	43.03
CDY16146	Canola	plastid	50.57	42.05
Bra004331.1-P	Field mustard	plastid	50.72	40.76
CDY38610	Canola	plastid	51.44	40.64
Bra024725.1-P	Field mustard	plastid	46.98	39.93
PGSC0003DMT400006515	Potato	plastid	33.48	39.63
PGSC0003DMT400040010	Potato	nucleus, plastid	36.35	39.35
PGSC0003DMT400001024	Potato	plastid	39.37	39.31
PGSC0003DMT400037638	Potato	plastid	32.18	38.62
PGSC0003DMT400045839	Potato	cytosol, plastid	38.36	36.68
PGSC0003DMT400062758	Potato	nucleus	35.34	34.36
PGSC0003DMT400001868	Potato	nucleus, plastid	32.61	33.28
GSMUA_Achr8P13750_001	Banana	cytosol, nucleus, plastid	40.95	32.5
PGSC0003DMT400083900	Potato	cytosol, nucleus, peroxisome	24.43	29.11
PGSC0003DMT400006664	Potato	cytosol	27.3	25.78
PGSC0003DMT400024762	Potato	cytosol, plasma membrane, plastid	24.57	25.6
PGSC0003DMT400008513	Potato	cytosol, plasma membrane, plastid	21.26	23.09
PGSC0003DMT400008632	Potato	mitochondrion	22.56	21.93

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102585366	MapMan:18.4.1.22	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	UniProt:M1ABV0	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400007455	PGSC:PGSC0003DMG400007455	EnsemblPlants:PGSC0003DMT400019290
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF489	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI000296578D
RefSeq:XP_006366059.1	SEG:seg	:	:	:	:

Description

ATP binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400007455]

Coordinates

chr4:+:596790..602927

Molecular Weight (calculated)

73410.9 Da

IEP (calculated)

6.868

GRAVY (calculated)

-0.621

Length

696 amino acids

Sequence
(BLAST)

001: MDSSPSHEES APPTDVAPPT FSPPPTPSSP SDSSPPPPSS SPPPSSPPPA SSSPPPSSPP RESTSPPPRS PPPQSSSPPP ASPPPEPTPP SPVSSPPQTS
101: SPPPALSPPP HVQNPEPPPA PQSHGNSSPP QSPEPKKGSS SSSPPSPPSS NSPGDGGGGG NSPPSPTSKS SDNSPPSPAS GPPKDSPPSP AALSPSNSPS
201: SDSPSNSSTP TSVIQWSPPP PSSNGAQSSL NPPSSQVPSN HSSGNRSTGS PKPAGGNSNG TAETVSIGVV IVLFLVGIIG AVAWCIRKRK KKNSVHCSGY
301: VKPISVCSSP KSESALLKVN ESTPERNGTS SNFLNSPADP GGFNNAKTWF TYQELVEATN DFSANNELGK GGFGSVYKGY LADGRYVAVK QLNIGGSQGE
401: REFRAEVEII SRIHHRHLVS LVGYCISENK RLLVYDYVSN NTLYFHLHAQ GRPVMNWPTR VKIAVGAARG IAYLHEDCYP RIIHRDIKSS NILLDDNFEA
501: HVADFGLAKL AQDAESHITT RVVGTFGYMA PEYASTGKLT EKSDVYSFGV VLLELITGRK SVDTSQPSGQ ENLVEWARPL LSRALQKEEF DLLADPCLEK
601: NYVGMEMFRM IEAAASCVRH SSAKRPAMGQ IMRAFDGMAI QDLSNGMKVG ESAIHSAALQ SAEISWFRKM AFGKQDFSSD FFSESNQNNR ESNEHP

Best Arabidopsis Sequence Match ( AT1G68690.2 )
(BLAST)

001: MATTPVQPPV SNSPPVTSPP PPLNNATSPA TPPPVTSPLP PSAPPPNRAP PPPPPVTTSP PPVANGAPPP PLPKPPESSS PPPQPVIPSP PPSTSPPPQP
101: VIPSPPPSAS PPPALVPPLP SSPPPPASVP PPRPSPSPPI LVRSPPPSVR PIQSPPPPPS DRPTQSPPPP SPPSPPSERP TQSPPSPPSE RPTQSPPPPS
201: PPSPPSDRPS QSPPPPPEDT KPQPPRRSPN SPPPTFSSPP RSPPEILVPG SNNPSQNNPT LRPPLDAPNS TNNSGIGTGA VVGISVAVAL VVFTLFGIFV
301: WCLRKREKRL SAVSGGDVTP SPMSSTARSD SAFFRMQSSA PVGASKRSGS YQSQSGGLGN SKALFSYEEL VKATNGFSQE NLLGEGGFGC VYKGILPDGR
401: VVAVKQLKIG GGQGDREFKA EVETLSRIHH RHLVSIVGHC ISGDRRLLIY DYVSNNDLYF HLHGEKSVLD WATRVKIAAG AARGLAYLHE DCHPRIIHRD
501: IKSSNILLED NFDARVSDFG LARLALDCNT HITTRVIGTF GYMAPEYASS GKLTEKSDVF SFGVVLLELI TGRKPVDTSQ PLGDESLVEW ARPLISHAIE
601: TEEFDSLADP KLGGNYVESE MFRMIEAAGA CVRHLATKRP RMGQIVRAFE SLAAEDLTNG MRLGESEVFN SAQQSAEIRL FRRMAFGSQN YSTDFFSHSS
701: YNSRDANV

Arabidopsis Description

PERK9Proline-rich receptor-like protein kinase PERK9 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX31]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.