Factsheet for PGSC0003DMT400001868

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 4
plasma membrane 1
nucleus 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g109530.2.1	Tomato	nucleus	94.57	92.41
PGSC0003DMT400062758	Potato	nucleus	70.67	67.32
VIT_03s0063g02440.t01	Wine grape	plastid	40.76	65.72
Bra034626.1-P	Field mustard	cytosol, nucleus, plastid	36.66	64.43
CDX92276	Canola	plasma membrane	43.11	61.25
Bra022359.1-P	Field mustard	plasma membrane	43.11	61.25
GSMUA_Achr7P26790_001	Banana	plastid	38.27	59.86
Bra037558.1-P	Field mustard	cytosol	25.37	59.04
GSMUA_Achr5P02090_001	Banana	nucleus	45.6	52.89
GSMUA_Achr4P32080_001	Banana	plastid	45.89	50.81
HORVU0Hr1G013830.4	Barley	plastid	41.64	50.18
GSMUA_Achr7P00830_001	Banana	plastid	45.16	50.16
TraesCS5A01G411300.1	Wheat	plastid	42.08	50.09
KXG39820	Sorghum	plastid	41.79	49.83
Zm00001d030218_P003	Maize	plastid	40.32	49.37
Zm00001d028337_P003	Maize	nucleus	42.08	49.23
EER91832	Sorghum	plastid	40.03	49.01
KRH60853	Soybean	cytosol, plastid	46.33	48.99
GSMUA_Achr4P10790_001	Banana	plastid	45.01	48.19
Zm00001d034257_P002	Maize	plastid	41.2	47.95
EER90803	Sorghum	plastid	42.08	47.6
CDX95494	Canola	nucleus, plastid	47.65	47.38
TraesCS4B01G233600.1	Wheat	nucleus, plastid	42.82	47.25
CDX99312	Canola	nucleus, plastid	45.31	47.18
HORVU2Hr1G061030.8	Barley	plastid	36.8	47.09
CDY18547	Canola	nucleus, plastid	46.92	46.72
TraesCS4A01G077500.1	Wheat	nucleus	42.08	46.22
PGSC0003DMT400038554	Potato	nucleus, plastid	33.43	46.15
GSMUA_Achr4P03200_001	Banana	mitochondrion, plasma membrane	45.89	46.1
TraesCS5B01G415000.1	Wheat	plastid	41.35	46.0
Os10t0104800-01	Rice	plastid	38.12	45.77
CDY61983	Canola	cytosol, plastid	46.63	45.62
CDX76282	Canola	nucleus, plastid	43.99	45.39
AT3G18810.1	Thale cress	nucleus, plastid	46.33	45.14
CDY48859	Canola	nucleus, plastid	45.31	45.11
CDY46249	Canola	nucleus, plastid	43.84	45.03
Os07t0137800-00	Rice	plasma membrane	35.48	44.98
PGSC0003DMT400040010	Potato	nucleus, plastid	42.38	44.95
Bra018782.1-P	Field mustard	plastid	44.72	44.92
Bra001723.1-P	Field mustard	cytosol, plastid	46.04	44.86
CDX75434	Canola	nucleus, plastid	44.13	44.79
PGSC0003DMT400006515	Potato	plastid	38.56	44.73
Bra011534.1-P	Field mustard	nucleus, plastid	43.99	44.64
CDY48084	Canola	nucleus, plastid	44.87	44.61
EER97954	Sorghum	plastid	37.24	44.41
CDX82325	Canola	cytosol, plastid	46.33	44.32
AT4G34440.1	Thale cress	plastid	43.4	44.18
PGSC0003DMT400001024	Potato	plastid	44.87	43.9
AT1G49270.1	Thale cress	cytosol, plastid	44.87	43.78
PGSC0003DMT400045839	Potato	cytosol, plastid	44.87	42.03
Zm00001d007848_P001	Maize	mitochondrion, plastid	37.1	41.61
CDX69059	Canola	endoplasmic reticulum, plasma membrane	43.11	41.18
PGSC0003DMT400037638	Potato	plastid	34.46	40.52
PGSC0003DMT400026193	Potato	plastid	37.83	37.83
HORVU4Hr1G065270.7	Barley	cytosol	23.75	32.93
PGSC0003DMT400064597	Potato	plastid	35.63	32.62
PGSC0003DMT400019290	Potato	mitochondrion	33.28	32.61
PGSC0003DMT400041343	Potato	plastid	34.46	31.8
PGSC0003DMT400083900	Potato	cytosol, nucleus, peroxisome	23.9	27.91
PGSC0003DMT400024762	Potato	cytosol, plasma membrane, plastid	24.34	24.85
PGSC0003DMT400006664	Potato	cytosol	26.25	24.29
PGSC0003DMT400008513	Potato	cytosol, plasma membrane, plastid	20.82	22.15
PGSC0003DMT400008632	Potato	mitochondrion	20.38	19.41

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.22	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
UniProt:M0ZJ76	PFAM:PF07714	EnsemblPlantsGene:PGSC0003DMG400000703	PGSC:PGSC0003DMG400000703	EnsemblPlants:PGSC0003DMT400001868	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF192	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI000295F1CA
SEG:seg	:	:	:	:	:

Description

Proline-rich receptor kinase PERK6 [Source:PGSC_GENE;Acc:PGSC0003DMG400000703]

Coordinates

chr1:+:85850872..85854803

Molecular Weight (calculated)

73638.6 Da

IEP (calculated)

7.265

GRAVY (calculated)

-1.006

Length

682 amino acids

Sequence
(BLAST)

001: MSSSSNGDSP SSNSSSSPPN NSNNNSSSGK DNSSSSNGNS NNNNNNSNNN SNNSNSQSPP SNNDSSSGKD NSSSSSNNNN NSNNNNNNNN NNSNSQSSPS
101: NNNNSSSGKD NNSSSNDNNN NGNNNNSNND NDDDNNSNNN NNNDNKSRSP PKSSDSSKGG SSPPPPPPFS PPSHFSPNSR PLAPPKPQSA KSDSKDNKAA
201: LRIGVAAGAG LLFLVMLVFL ISCCKRKKKR KHDQMGYYRD NSHGAMNNHY YNNTGQHTNN WQTNNKLQST DQFHKMPPPG SGQVSSEHSW PIAPPPPPPM
301: MSSSEMSSAA FSGPHQPAQP PPHPAMALGY NQSSFTYDDL AVATGGFTKD KLLGQGGFGY VHKGVLPNGK EVAVKSLKSN SGQGEREFQA EVEIISRVHH
401: RHLVSLVGYC IAGSQRMLVY EFVANSTLED HLHGSGRPPM DFNTRHRIAL GAAKGFAYLH EDCHPKIIHR DIKTANILLD ENFEAKVADF GLAKLSSDNH
501: THVSTRIMGT FGYLAPEYAS SGKLTEKSDV YSYGVMLLEL ITGRRPIDMD GDDDTLVEWA RPILIRATEG GNYDELIDPR LEGNFDAQQM LCMVACAAAT
601: IRHSAKRRPK MSQVVRALED DVTLDDLNEG GKLGHSATLS SGSSEPDGGS YDLKKFRKSS MSSQEYSSSE NGESREFRQN KK

Best Arabidopsis Sequence Match ( AT1G49270.1 )
(BLAST)

001: MAEGQSPENS PPAPPPPSPP SPPSSNDQQT TSPPPSDNQE TTSPPPPSSP DIAPPPQQQQ ESPPPPLPEN SSDGSSSSSP PPPSDSSSQS QSPPPPSTSP
101: PQQSDNNGNK GNNNENNKGN DGSSGDGGNK NMSHTPPPPS KTSDHSSHSQ PRSLAPPTSN SGSNSSSNDG LNIGAVIGLV AAAGILFIVM ILLCVCCFRK
201: KKKKSKLDQM PYYGSNAYPA GKTGGDQYYN QNAATQQQQH YNQNDHIVNL PPPPGSMGTN WVSSPPPPPP GNWQPMPSPP APVSGGANVI QSGEMSSNFS
301: SGPYAPSLPP PHPSVALGFN NSTFTYEELA SATQGFSKDR LLGQGGFGYV HKGILPNGKE IAVKSLKAGS GQGEREFQAE VEIISRVHHR HLVSLVGYCS
401: NAGGQRLLVY EFLPNDTLEF HLHGKSGTVM DWPTRLKIAL GSAKGLAYLH EDCHPKIIHR DIKASNILLD HNFEAKVADF GLAKLSQDNN THVSTRVMGT
501: FGYLAPEYAS SGKLTEKSDV FSFGVMLLEL ITGRGPVDLS GDMEDSLVDW ARPLCMRVAQ DGEYGELVDP FLEHQYEPYE MARMVACAAA AVRHSGRRRP
601: KMSQIVRTLE GDASLDDLDD GVKPKQSSSG GEGSSDYEMG TYGAEMRKFR KVTLESRDYG ASSEYGATSE YGLDPSSSSS EEMHIGGSTS KTTTTNRGI

Arabidopsis Description

PERK7Proline-rich receptor-like protein kinase PERK7 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI96]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.