Factsheet for TraesCS4B01G233600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 3
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G077500.1	Wheat	nucleus	94.82	94.36
KXG39820	Sorghum	plastid	64.56	69.76
Zm00001d028337_P003	Maize	nucleus	65.7	69.64
Bra034626.1-P	Field mustard	cytosol, nucleus, plastid	41.1	65.46
VIT_03s0063g02440.t01	Wine grape	plastid	43.37	63.36
Bra037558.1-P	Field mustard	cytosol	29.45	62.12
GSMUA_Achr7P26790_001	Banana	plastid	42.72	60.55
VIT_04s0023g01570.t01	Wine grape	nucleus	43.04	58.85
Bra022359.1-P	Field mustard	plasma membrane	44.82	57.71
CDX92276	Canola	plasma membrane	44.82	57.71
TraesCS1B01G001500.1	Wheat	plastid	32.04	55.15
GSMUA_Achr4P10790_001	Banana	plastid	52.43	50.86
Bra039607.1-P	Field mustard	nucleus	49.68	50.33
KRH28656	Soybean	nucleus, plastid	51.29	50.16
KRH76796	Soybean	nucleus, plastid	51.46	50.16
AT2G18470.3	Thale cress	plastid	50.81	49.61
CDY65603	Canola	plastid	49.51	49.51
CDY71995	Canola	nucleus, plastid	33.98	49.07
PGSC0003DMT400038554	Potato	nucleus, plastid	38.67	48.38
TraesCS1B01G350100.1	Wheat	cytosol	35.11	48.12
CDY59546	Canola	plastid	33.66	47.71
KRH08293	Soybean	nucleus	46.12	47.58
GSMUA_Achr4P03200_001	Banana	mitochondrion, plasma membrane	51.94	47.28
TraesCS5B01G415000.1	Wheat	plastid	46.76	47.15
PGSC0003DMT400040010	Potato	nucleus, plastid	48.87	46.97
KRH69932	Soybean	plastid	46.12	46.88
KRH60853	Soybean	cytosol, plastid	48.54	46.51
Solyc02g062790.2.1	Tomato	nucleus	49.19	46.48
Solyc02g085430.2.1	Tomato	nucleus, plastid	45.63	46.23
CDX95494	Canola	nucleus, plastid	50.81	45.77
Bra018782.1-P	Field mustard	plastid	50.16	45.66
CDX99312	Canola	nucleus, plastid	48.38	45.65
CDY18547	Canola	nucleus, plastid	50.49	45.55
TraesCS1B01G147000.2	Wheat	plastid	45.47	45.54
CDY48859	Canola	nucleus, plastid	50.32	45.4
CDY48084	Canola	nucleus, plastid	50.32	45.34
TraesCS3B01G179300.1	Wheat	plastid	45.95	45.01
AT1G49270.1	Thale cress	cytosol, plastid	50.49	44.64
AT3G18810.1	Thale cress	nucleus, plastid	50.49	44.57
Solyc10g051330.1.1	Tomato	nucleus	43.04	44.33
CDY61983	Canola	cytosol, plastid	50.0	44.33
CDX76282	Canola	nucleus, plastid	47.41	44.33
CDY46249	Canola	nucleus, plastid	47.57	44.28
Bra001723.1-P	Field mustard	cytosol, plastid	49.84	44.0
AT4G34440.1	Thale cress	plastid	47.57	43.88
CDX75434	Canola	nucleus, plastid	47.57	43.75
Bra011534.1-P	Field mustard	nucleus, plastid	47.41	43.6
HORVU4Hr1G065270.7	Barley	cytosol	34.63	43.5
CDX82325	Canola	cytosol, plastid	50.16	43.48
PGSC0003DMT400001868	Potato	nucleus, plastid	47.25	42.82
PGSC0003DMT400045839	Potato	cytosol, plastid	49.19	41.76
Solyc01g109530.2.1	Tomato	nucleus	46.76	41.4
PGSC0003DMT400062758	Potato	nucleus	47.9	41.34
Solyc03g034060.2.1	Tomato	cytosol, plastid	49.35	40.99
CDX69059	Canola	endoplasmic reticulum, plasma membrane	46.93	40.62
Solyc11g044460.1.1	Tomato	nucleus	47.09	39.75
TraesCS3B01G008600.2	Wheat	plastid	40.45	36.44
TraesCS3B01G259100.1	Wheat	cytosol, plastid	41.1	36.39
TraesCS7B01G131000.1	Wheat	nucleus, plastid	43.04	35.33
TraesCS3B01G312300.1	Wheat	plastid	38.19	34.86
TraesCS7B01G130400.2	Wheat	cytosol	41.42	33.51
Bra037220.1-P	Field mustard	nucleus	49.51	33.41
CDY66134	Canola	nucleus	49.51	33.26
CDY51224	Canola	plastid	50.0	32.66
TraesCS3B01G325100.2	Wheat	plastid	41.1	31.32
TraesCS3B01G245800.1	Wheat	mitochondrion, plasma membrane	27.67	22.83
TraesCS3B01G440700.2	Wheat	mitochondrion	22.49	20.0
TraesCS1B01G468900.1	Wheat	plastid	28.16	19.38

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.22	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF07714	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF192	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS4B01G233600	EnsemblPlants:TraesCS4B01G233600.1	TIGR:cd14066	SEG:seg

Description

No Description!

Coordinates

chr4B:-:486205814..486208106

Molecular Weight (calculated)

64458.2 Da

IEP (calculated)

6.243

GRAVY (calculated)

-0.488

Length

618 amino acids

Sequence
(BLAST)

001: MDDSPLSRGP LAPLLGSGPL DPSSSAAADS DGSGGSSSGA SDSSGESSSS GSPPSPSGPQ SSTQSTPPPG SEESAPSPPS PSLSPPPATP AGTSGSPPGQ
101: SSPPGSNAIP SPQAPKSNGG GGGSSESGGG SKGGGGSKGK GGSKQDGSPP VEAVVVGVVI GVLVFALLLC IAACVCCARR RKKKRPPMAM PFYTDQHGNV
201: YYANNMPSPW QQSGGPSDGH GGVGWHLQYP PGQGPLSEEM TMSGSQGSGS SMPPPPPAIF GSQSSFTYEE LASATGGFSK ANLLGQGGFG YVYKGVLPGS
301: GKEVAVKQLK AGSGQGEREF QAEVEIISRV HHRHLVSLVG YCIAGSSQRL LVYEFVANDT LEHHLHGKGV PVMDWRKRLA IALGSAKGLA YLHEDCNPRI
401: IHRDIKAANI LLDENFEAKV ADFGLAKLTT DNNTHVSTRV MGTFGYLAPE YASSGKLTDK SDVFSFGVMM LELITGRRPV DPSNYMEDSL VDWARPLLAR
501: ALSEGGNFDE VVDPRLENKY DRQEMERMAA SAAATVRHSA KRRPKMKQIV RALEGDASLD DLNEGMKPGQ SMIYSSDESG SYAANINRLR QIAFESSEEY
601: TNEYSGTGES GETTQRHH

Best Arabidopsis Sequence Match ( AT4G34440.2 )
(BLAST)

001: MADSPVDSSP APETSNGTPP SNGTSPSNES SPPTPPSSPP PSSISAPPPD ISASFSPPPA PPTQETSPPT SPSSSPPVVA NPSPQTPENP SPPAPEGSTP
101: VTPPAPPQTP SNQSPERPTP PSPGANDDRN RTNGGNNNRD GSTPSPPSSG NRTSGDGGSP SPPRSISPPQ NSGDSDSSSG NHPQANIGLI IGVLVGAGLL
201: LLLAVCICIC CNRKKKKKSP QVNHMHYYNN NPYGGAPSGN GGYYKGTPQD HVVNMAGQGG GNWGPQQPVS GPHSDASNLT GRTAIPSPQA ATLGHNQSTF
301: TYDELSIATE GFAQSNLLGQ GGFGYVHKGV LPSGKEVAVK SLKLGSGQGE REFQAEVDII SRVHHRHLVS LVGYCISGGQ RLLVYEFIPN NTLEFHLHGK
401: GRPVLDWPTR VKIALGSARG LAYLHEDCHP RIIHRDIKAA NILLDFSFET KVADFGLAKL SQDNYTHVST RVMGTFGYLA PEYASSGKLS DKSDVFSFGV
501: MLLELITGRP PLDLTGEMED SLVDWARPLC LKAAQDGDYN QLADPRLELN YSHQEMVQMA SCAAAAIRHS ARRRPKMSQI VRALEGDMSM DDLSEGTRPG
601: QSTYLSPGSV SSEYDASSYT ADMKKFKKLA LENKEYQSSE YGGTSEYGLN PSASSSEEMN RGSMKRNPQL

Arabidopsis Description

PERK5PERK5 [Source:UniProtKB/TrEMBL;Acc:A0A178V2W8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.