Factsheet for Solyc03g034060.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
plasma membrane 1
mitochondrion 1
cytosol 2
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400045839	Potato	cytosol, plastid	90.46	92.45
Solyc02g089750.2.1	Tomato	cytosol	17.07	72.57
Solyc02g062790.2.1	Tomato	nucleus	55.24	62.84
VIT_04s0023g01570.t01	Wine grape	nucleus	37.9	62.39
Solyc02g085430.2.1	Tomato	nucleus, plastid	50.81	61.97
GSMUA_Achr7P26790_001	Banana	plastid	35.48	60.55
KRH76796	Soybean	nucleus, plastid	45.97	53.94
AT2G18470.3	Thale cress	plastid	45.03	52.92
GSMUA_Achr5P02090_001	Banana	nucleus	41.8	52.89
Zm00001d030218_P003	Maize	plastid	39.52	52.78
Bra039607.1-P	Field mustard	nucleus	43.15	52.62
Zm00001d028337_P003	Maize	nucleus	41.13	52.49
CDY65603	Canola	plastid	43.55	52.43
KRH28656	Soybean	nucleus, plastid	44.49	52.37
KXG39820	Sorghum	plastid	40.05	52.1
EER91832	Sorghum	plastid	38.71	51.71
GSMUA_Achr4P10790_001	Banana	plastid	43.82	51.18
Os10t0104800-01	Rice	plastid	38.58	50.53
GSMUA_Achr4P32080_001	Banana	plastid	41.8	50.49
CDY71995	Canola	nucleus, plastid	29.03	50.47
KRH08293	Soybean	nucleus	40.59	50.42
KRH69932	Soybean	plastid	41.13	50.33
EER90803	Sorghum	plastid	40.73	50.25
HORVU0Hr1G013830.4	Barley	plastid	38.17	50.18
GSMUA_Achr7P00830_001	Banana	plastid	41.4	50.16
Solyc08g068250.2.1	Tomato	cytosol	28.36	50.0
CDY59546	Canola	plastid	29.17	49.77
Solyc12g007110.1.1	Tomato	nucleus	45.7	49.63
TraesCS5A01G411300.1	Wheat	plastid	38.04	49.39
TraesCS4B01G233600.1	Wheat	nucleus, plastid	40.99	49.35
TraesCS4A01G077500.1	Wheat	nucleus	41.13	49.28
Zm00001d034257_P002	Maize	plastid	38.58	48.98
HORVU2Hr1G061030.8	Barley	plastid	34.95	48.78
GSMUA_Achr4P03200_001	Banana	mitochondrion, plasma membrane	44.35	48.6
Solyc03g120760.2.1	Tomato	plasma membrane, plastid	37.63	48.19
EER97954	Sorghum	plastid	36.96	48.08
Os07t0137800-00	Rice	plasma membrane	33.6	46.47
Zm00001d007848_P001	Maize	mitochondrion, plastid	37.63	46.05
TraesCS5B01G415000.1	Wheat	plastid	37.63	45.68
Solyc10g051330.1.1	Tomato	nucleus	36.02	44.67
Solyc11g044460.1.1	Tomato	nucleus	43.55	44.26
Solyc01g109530.2.1	Tomato	nucleus	40.73	43.41
Solyc01g010030.2.1	Tomato	plastid	37.77	38.49
Solyc05g010140.2.1	Tomato	plastid	37.9	37.6
Bra037220.1-P	Field mustard	nucleus	43.82	35.59
CDY66134	Canola	nucleus	43.55	35.22
CDY51224	Canola	plastid	43.95	34.57
HORVU4Hr1G065270.7	Barley	cytosol	22.85	34.55
Solyc04g006930.2.1	Tomato	plastid	35.48	33.0
Solyc07g027020.2.1	Tomato	cytosol, mitochondrion, plasma membrane, plastid	22.72	26.08
Solyc03g121440.2.1	Tomato	cytosol	25.0	25.44
Solyc12g044840.1.1	Tomato	cytosol	24.19	24.29
Solyc04g063370.1.1	Tomato	cytosol	18.95	23.27
Solyc04g079690.2.1	Tomato	plasma membrane	21.1	21.87
Solyc01g096690.1.1	Tomato	cytosol, nucleus, plasma membrane	19.35	21.79

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.22	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
GO:GO:0038023	InterPro:IPR000719	UniProt:K4BFS8	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PRINTS:PR01217
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF192	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc03g034060.2
EnsemblPlants:Solyc03g034060.2.1	TMHMM:TMhelix	UniParc:UPI0002767BBD	SEG:seg	:	:

Description

No Description!

Coordinates

chr3:-:5763353..5768117

Molecular Weight (calculated)

78341.1 Da

IEP (calculated)

6.240

GRAVY (calculated)

-0.728

Length

744 amino acids

Sequence
(BLAST)

001: MEDSPSSRSS NSSSSTPPSS SSSPPPPNSS PPPSPPESSP PPLKSDSSSP PPPKSDSSSP PPPPSKSDSP SPPPPESSPP PKSESSPPPP SPNQSPPPKS
101: ESSPPPASPP PTESSPPPAS PPPTESSPRK PSDSSPSSDN DKPNTQSPPP SSNSNSSSSS SSSSPSPTTN TKPSPLKNSS FNEPNSPPSS TFSPPAPISP
201: ESSQFPPGKA LPTSPPSRDA SSNKSPGSLG TINSPTHEQS SSSTVAIVAA AAVAGLLIFA IIIVCLLCNR KKKKQPYYVD PAHPPKGGDP YYNTGNYSSP
301: HTDHIVTLAP PPGVMGTPQE GGRGWTPPPP PPGANTSSEF SSGYSSHVPG GGPATIPSPN YGGLSKIQFT YADLATATGG FSDANVLGQG GFGFVHKGVL
401: TDGNVVAVKS LKSGSGQGER EFQAEVEIIS RVHHRHLVSL VGYCIADGQR MLVYEFVPNG TLEYHLHGKG RPVMDWGLRL KIALGSAKGL AYLHEDCHPR
501: IIHRDIKGAN ILLDNNYEAM VADFGLARLT EDNNTHVSTR VMGTFGYLAP EYASSGKLSE KSDVFSFGVM LLELITGRRP LDTTNKLMDD SLVDWARPFL
601: TKALEENNYD ELVDPRLEGN YDPDELQRMV ACAAASVRHS ARRRPKMSQI VRALDGDSSL EDLNEKAGKN NTANFGGASG PASDIYDTRA YNADMVKFRQ
701: MVMTNQDMNS SEYGNTSDYG LHPSDTSSDF SSDNNHSGPN KQSK

Best Arabidopsis Sequence Match ( AT2G18470.1 )
(BLAST)

001: MASSPESAPP TNSTSSPSPP SNTNSTTSSP PAPSPPSPTP PQGDSSSSPP PDSTSPPAPQ APNPPNSSNN SPSPPSQGGG GERGNGGNNG GNDTPPSRGS
101: PPSPPSRSNG DNGGSRSSPP GDTGGSRSDN PPSSGGSSGG GGGGRSNTNT AIIVGVLVGA GLLMIVLIIV CLRRKKKRKD SFYPEPMKGN QYQYYGNNNN
201: NNASQNYPNW HLNSQGQNQQ STGGWGGGGP SPPPPPRMPT SGEDSSMYSG PSRPVLPPPS PALALGFNKS TFTYQELAAA TGGFTDANLL GQGGFGYVHK
301: GVLPSGKEVA VKSLKAGSGQ GEREFQAEVD IISRVHHRYL VSLVGYCIAD GQRMLVYEFV PNKTLEYHLH GKNLPVMEFS TRLRIALGAA KGLAYLHEDC
401: HPRIIHRDIK SANILLDFNF DAMVADFGLA KLTSDNNTHV STRVMGTFGY LAPEYASSGK LTEKSDVFSY GVMLLELITG KRPVDNSITM DDTLVDWARP
501: LMARALEDGN FNELADARLE GNYNPQEMAR MVTCAAASIR HSGRKRPKMS QIVRALEGEV SLDALNEGVK PGHSNVYGSL GASSDYSQTS YNADMKKFRQ
601: IALSSQEFPV SDCEGTSSND SRDMGTKSPT PPK

Arabidopsis Description

PERK4Proline-rich receptor-like protein kinase PERK4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZNQ8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.