Factsheet for Solyc02g062790.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 3
plasma membrane 1
nucleus 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400040010	Potato	nucleus, plastid	93.12	94.71
Solyc02g089750.2.1	Tomato	cytosol	19.11	71.43
VIT_04s0023g01570.t01	Wine grape	nucleus	42.81	61.95
Solyc02g085430.2.1	Tomato	nucleus, plastid	55.2	59.18
GSMUA_Achr7P26790_001	Banana	plastid	37.31	55.96
Solyc03g034060.2.1	Tomato	cytosol, plastid	62.84	55.24
Zm00001d028337_P003	Maize	nucleus	46.94	52.66
KRH76796	Soybean	nucleus, plastid	50.46	52.05
KXG39820	Sorghum	plastid	45.11	51.57
EER91832	Sorghum	plastid	43.73	51.35
Zm00001d030218_P003	Maize	plastid	43.73	51.35
Bra039607.1-P	Field mustard	nucleus	47.4	50.82
KRH28656	Soybean	nucleus, plastid	48.93	50.63
CDY65603	Canola	plastid	47.71	50.49
AT2G18470.3	Thale cress	plastid	48.78	50.39
GSMUA_Achr5P02090_001	Banana	nucleus	45.26	50.34
KRH08293	Soybean	nucleus	45.72	49.92
Solyc08g068250.2.1	Tomato	cytosol	31.96	49.53
Os10t0104800-01	Rice	plastid	42.97	49.47
GSMUA_Achr4P32080_001	Banana	plastid	46.48	49.35
CDY71995	Canola	nucleus, plastid	32.26	49.3
TraesCS4A01G077500.1	Wheat	nucleus	46.79	49.28
TraesCS4B01G233600.1	Wheat	nucleus, plastid	46.48	49.19
KRH69932	Soybean	plastid	45.72	49.18
CDY59546	Canola	plastid	32.57	48.85
HORVU0Hr1G013830.4	Barley	plastid	42.2	48.76
GSMUA_Achr7P00830_001	Banana	plastid	45.72	48.7
GSMUA_Achr4P10790_001	Banana	plastid	46.94	48.19
Solyc12g007110.1.1	Tomato	nucleus	50.31	48.03
HORVU2Hr1G061030.8	Barley	plastid	38.99	47.84
TraesCS5A01G411300.1	Wheat	plastid	41.9	47.82
Zm00001d034257_P002	Maize	plastid	42.35	47.27
EER90803	Sorghum	plastid	43.27	46.93
Solyc03g120760.2.1	Tomato	plasma membrane, plastid	40.21	45.27
EER97954	Sorghum	plastid	39.45	45.1
GSMUA_Achr4P03200_001	Banana	mitochondrion, plasma membrane	46.79	45.07
TraesCS5B01G415000.1	Wheat	plastid	42.05	44.86
Os07t0137800-00	Rice	plasma membrane	36.39	44.24
Solyc10g051330.1.1	Tomato	nucleus	39.76	43.33
Zm00001d007848_P001	Maize	mitochondrion, plastid	39.91	42.93
Solyc11g044460.1.1	Tomato	nucleus	46.79	41.8
Solyc01g109530.2.1	Tomato	nucleus	44.04	41.26
Solyc01g010030.2.1	Tomato	plastid	40.52	36.3
Solyc05g010140.2.1	Tomato	plastid	39.76	34.67
Bra037220.1-P	Field mustard	nucleus	47.09	33.62
CDY66134	Canola	nucleus	46.64	33.15
CDY51224	Canola	plastid	47.09	32.56
HORVU4Hr1G065270.7	Barley	cytosol	24.31	32.32
Solyc04g006930.2.1	Tomato	plastid	38.84	31.75
Solyc07g027020.2.1	Tomato	cytosol, mitochondrion, plasma membrane, plastid	25.23	25.46
Solyc03g121440.2.1	Tomato	cytosol	27.22	24.35
Solyc12g044840.1.1	Tomato	cytosol	26.61	23.48
Solyc04g063370.1.1	Tomato	cytosol	21.25	22.94
Solyc01g096690.1.1	Tomato	cytosol, nucleus, plasma membrane	21.56	21.33
Solyc04g079690.2.1	Tomato	plasma membrane	22.94	20.89

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.22	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
GO:GO:0038023	InterPro:IPR000719	UniProt:K4B6G7	InterPro:Kinase-like_dom_sf	PFAM:PF07714	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF192	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc02g062790.2	EnsemblPlants:Solyc02g062790.2.1
TMHMM:TMhelix	UniParc:UPI0002768459	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2:-:34575804..34579012

Molecular Weight (calculated)

69969.8 Da

IEP (calculated)

6.723

GRAVY (calculated)

-0.748

Length

654 amino acids

Sequence
(BLAST)

001: MDSSPGTASS NDTDSKGTPS SNGTPPSSSS SDSKNDSPSS SSSSPSPKNE SPPSSSPPPQ SPPPSSNASP PPKNDSPPPS SPPPSSPGSD ASPSKDNNND
101: NNNNNDNNNN NNNNNNTNNQ SPNPSSNTPS QSPPPSSTSN NPSTPNSPKN PPSFLSFSPP PPVLTPAPPH AHLSPPPRSG SNEPSPANND SSSTVGIVAG
201: IAVGGIVIVA LIILCVWCSR RKKKQRYYMA PGPKGGDPYY NNNNQWNRRQ SMDHVMKVPQ SEMGTQSGWA GATPHQQGAN SSGEFGSGYS GQAAPLPSQS
301: PNMGLGGFSQ SQFTYEELAK ATDGFSQANL LGQGGFGYVH KGVLNDGRVV AIKSLKAGSG QGEREFQAEV EIISRVHHRH LVSLVGYCIA NGQRMLVYEY
401: VDNKTLEFHL HGKGQPVMDW ETRLKIALGS AKGLAYLHED CQHRIIHRDI KAANILLDLN YEALVADFGL AKLTSDNNTH VSTRVMGTFG YLAPEYASSG
501: KLTEKSDVFS YGVMLLELIT AKKPVDPSNM MEDSLVDWAR PLLTRALEEE KYDGLVDARL EGNYDTDELH RMIGCAASSI RHSAKRRPKM SQIVRALEGN
601: SSLEDLNDNP KPSKVASFAG APTQSYDTGM YNADMMKFRK MIMPTQEFSS SPSE

Best Arabidopsis Sequence Match ( AT3G24550.1 )
(BLAST)

001: MSTAPSPGTT PSPSPPSPPT NSTTTTPPPA ASSPPPTTTP SSPPPSPSTN STSPPPSSPL PPSLPPPSPP GSLTPPLPQP SPSAPITPSP PSPTTPSNPR
101: SPPSPNQGPP NTPSGSTPRT PSNTKPSPPS DSSDGLSTGV VVGIAIGGVA ILVILTLICL LCKKKRRRRH DDEAAYYVPP PPPSGPKAGG PYGGQQQYWQ
201: QQNASRPSDN HVVTSLPPPK PPSPPRKPPP PPPPPAFMSS SGGSDYSDLP VLPPPSPGLV LGFSKSTFTY EELSRATNGF SEANLLGQGG FGYVHKGILP
301: SGKEVAVKQL KAGSGQGERE FQAEVEIISR VHHRHLVSLI GYCMAGVQRL LVYEFVPNNN LEFHLHGKGR PTMEWSTRLK IALGSAKGLS YLHEDCNPKI
401: IHRDIKASNI LIDFKFEAKV ADFGLAKIAS DTNTHVSTRV MGTFGYLAPE YAASGKLTEK SDVFSFGVVL LELITGRRPV DANNVYVDDS LVDWARPLLN
501: RASEEGDFEG LADSKMGNEY DREEMARMVA CAAACVRHSA RRRPRMSQIV RALEGNVSLS DLNEGMRPGH SNVYSSYGGS TDYDTSQYND DMIKFRKMAL
601: GTQEYGTTGE YSNPTSDYGL YPSGSSSEGQ ATREMEMGKI KKTGQGYSGP SL

Arabidopsis Description

PERK1Proline-rich receptor-like protein kinase PERK1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LV48]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.