Factsheet for Solyc01g109530.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 4
plasma membrane 1
nucleus 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400001868	Potato	nucleus, plastid	92.41	94.57
Solyc02g089750.2.1	Tomato	cytosol	17.34	69.14
Solyc11g044460.1.1	Tomato	nucleus	70.49	67.21
VIT_03s0063g02440.t01	Wine grape	plastid	40.11	66.19
Bra034626.1-P	Field mustard	cytosol, nucleus, plastid	35.82	64.43
Bra022359.1-P	Field mustard	plasma membrane	42.55	61.88
CDX92276	Canola	plasma membrane	42.55	61.88
Solyc10g051330.1.1	Tomato	nucleus	51.72	60.17
GSMUA_Achr7P26790_001	Banana	plastid	37.54	60.09
Bra037558.1-P	Field mustard	cytosol	24.93	59.39
GSMUA_Achr5P02090_001	Banana	nucleus	44.99	53.4
Solyc08g068250.2.1	Tomato	cytosol	31.38	51.9
GSMUA_Achr4P32080_001	Banana	plastid	45.27	51.3
GSMUA_Achr7P00830_001	Banana	plastid	44.56	50.65
HORVU0Hr1G013830.4	Barley	plastid	40.4	49.82
TraesCS5A01G411300.1	Wheat	plastid	40.69	49.56
Zm00001d030218_P003	Maize	plastid	39.54	49.55
KXG39820	Sorghum	plastid	40.54	49.48
KRH60853	Soybean	cytosol, plastid	45.7	49.46
EER91832	Sorghum	plastid	39.4	49.37
Zm00001d028337_P003	Maize	nucleus	40.83	48.89
GSMUA_Achr4P10790_001	Banana	plastid	43.7	47.88
Zm00001d034257_P002	Maize	plastid	39.97	47.61
HORVU2Hr1G061030.8	Barley	plastid	36.25	47.47
EER90803	Sorghum	plastid	40.97	47.43
CDX95494	Canola	nucleus, plastid	46.42	47.23
CDX99312	Canola	nucleus, plastid	44.27	47.18
TraesCS4B01G233600.1	Wheat	nucleus, plastid	41.4	46.76
CDY18547	Canola	nucleus, plastid	45.85	46.72
GSMUA_Achr4P03200_001	Banana	mitochondrion, plasma membrane	45.13	46.39
TraesCS4A01G077500.1	Wheat	nucleus	40.69	45.73
TraesCS5B01G415000.1	Wheat	plastid	40.11	45.68
Os10t0104800-01	Rice	plastid	37.11	45.6
AT3G18810.1	Thale cress	nucleus, plastid	45.56	45.43
CDX76282	Canola	nucleus, plastid	42.98	45.39
CDY61983	Canola	cytosol, plastid	45.13	45.19
CDY48859	Canola	nucleus, plastid	44.27	45.11
CDY46249	Canola	nucleus, plastid	42.84	45.03
Solyc03g120760.2.1	Tomato	plasma membrane, plastid	37.39	44.92
Bra018782.1-P	Field mustard	plastid	43.7	44.92
Os07t0137800-00	Rice	plasma membrane	34.53	44.8
CDX75434	Canola	nucleus, plastid	43.12	44.79
Bra001723.1-P	Field mustard	cytosol, plastid	44.84	44.71
Bra011534.1-P	Field mustard	nucleus, plastid	42.98	44.64
CDY48084	Canola	nucleus, plastid	43.7	44.46
Solyc02g085430.2.1	Tomato	nucleus, plastid	38.83	44.43
EER97954	Sorghum	plastid	36.39	44.41
Solyc12g007110.1.1	Tomato	nucleus	43.41	44.23
Solyc02g062790.2.1	Tomato	nucleus	41.26	44.04
AT1G49270.1	Thale cress	cytosol, plastid	43.98	43.92
CDX82325	Canola	cytosol, plastid	44.84	43.9
AT4G34440.1	Thale cress	plastid	42.12	43.88
Zm00001d007848_P001	Maize	mitochondrion, plastid	36.25	41.61
CDX69059	Canola	endoplasmic reticulum, plasma membrane	42.12	41.18
Solyc03g034060.2.1	Tomato	cytosol, plastid	43.41	40.73
Solyc01g010030.2.1	Tomato	plastid	33.81	32.33
Solyc05g010140.2.1	Tomato	plastid	34.53	32.13
HORVU4Hr1G065270.7	Barley	cytosol	22.64	32.11
Solyc04g006930.2.1	Tomato	plastid	31.52	27.5
Solyc07g027020.2.1	Tomato	cytosol, mitochondrion, plasma membrane, plastid	24.07	25.93
Solyc03g121440.2.1	Tomato	cytosol	25.36	24.21
Solyc12g044840.1.1	Tomato	cytosol	24.79	23.35
Solyc04g063370.1.1	Tomato	cytosol	18.34	21.12
Solyc01g096690.1.1	Tomato	cytosol, nucleus, plasma membrane	19.91	21.03
Solyc04g079690.2.1	Tomato	plasma membrane	20.34	19.78

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.22	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
GO:GO:0038023	InterPro:IPR000719	UniProt:K4B3G6	InterPro:Kinase-like_dom_sf	PFAM:PF07714	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF192	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc01g109530.2	EnsemblPlants:Solyc01g109530.2.1
TMHMM:TMhelix	UniParc:UPI00027689D5	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr1:+:96453862..96458213

Molecular Weight (calculated)

75586.5 Da

IEP (calculated)

7.121

GRAVY (calculated)

-1.077

Length

698 amino acids

Sequence
(BLAST)

001: MSSSSNGDSP SSNSSSSSSP NNSNNNSPPE KDNSSSSNGN DNNNSSNNNN NNNNNNNSNS QSPPSNNDSS SGKDNNSSSS NNNNNNNSNN NNNDNNNNKN
101: NNSNSQSPPS NNNNSSSGKD NNSSSNNNNN GNNNNGNNNN GNNNNDNNNN GNNNDNDNDN NNNNDNKSRS PPNSSKGGSS LAPPFSPPSH FSPNSRPLAP
201: PKPQSDKSDS NDNKTALRIG VAAGAGLLFI VMLVFLISCC KRKKKRKHGQ MGYYRDNSHG AMNNHYYNNT GQRTNNWQTN NKLQSTDQFH KMPPPGSGQV
301: SSEHSWPIAP PPPPPMMSSS DMSSSAFSGP HQPAQPPPHP AMALGYNQSS FTYDDLAVAT GGFTKDKLLG QGGFGYVHKG VLPNGKEIAV KSLKSNSGQG
401: EREFQAEVEI ISRVHHRHLV SLVGYCIAGS QRMLVYEFVA NSTLEDHLHG SGRPTMDFNT RHRIALGAAK GFAYLHEDCH PKIIHRDIKA ANILLDENFE
501: AKVADFGLAK LSSDNHTHVS TRIMGTFGYL APEYASSGKL TEKSDVYSYG VMLLELITGR RPIDMDGDDD TLVEWARPIL IRATEGGNYD ELIDPRLEGN
601: FDAQQMLCMV ACAAATIRHS AKRRPKMSQV VRALEDDVTL DDLNEGGKLG HSATLSSGSS EQDGGSYDLK KFRKSSMSSQ EYSSSENGES REFRQNKK

Best Arabidopsis Sequence Match ( AT2G18470.1 )
(BLAST)

001: MASSPESAPP TNSTSSPSPP SNTNSTTSSP PAPSPPSPTP PQGDSSSSPP PDSTSPPAPQ APNPPNSSNN SPSPPSQGGG GERGNGGNNG GNDTPPSRGS
101: PPSPPSRSNG DNGGSRSSPP GDTGGSRSDN PPSSGGSSGG GGGGRSNTNT AIIVGVLVGA GLLMIVLIIV CLRRKKKRKD SFYPEPMKGN QYQYYGNNNN
201: NNASQNYPNW HLNSQGQNQQ STGGWGGGGP SPPPPPRMPT SGEDSSMYSG PSRPVLPPPS PALALGFNKS TFTYQELAAA TGGFTDANLL GQGGFGYVHK
301: GVLPSGKEVA VKSLKAGSGQ GEREFQAEVD IISRVHHRYL VSLVGYCIAD GQRMLVYEFV PNKTLEYHLH GKNLPVMEFS TRLRIALGAA KGLAYLHEDC
401: HPRIIHRDIK SANILLDFNF DAMVADFGLA KLTSDNNTHV STRVMGTFGY LAPEYASSGK LTEKSDVFSY GVMLLELITG KRPVDNSITM DDTLVDWARP
501: LMARALEDGN FNELADARLE GNYNPQEMAR MVTCAAASIR HSGRKRPKMS QIVRALEGEV SLDALNEGVK PGHSNVYGSL GASSDYSQTS YNADMKKFRQ
601: IALSSQEFPV SDCEGTSSND SRDMGTKSPT PPK

Arabidopsis Description

PERK4Proline-rich receptor-like protein kinase PERK4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZNQ8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.