CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra001723.1-P	Field mustard	cytosol, plastid	97.62	99.43
CDY61983	Canola	cytosol, plastid	95.37	97.56
CDX92276	Canola	plasma membrane	59.33	88.12
AT3G18810.1	Thale cress	nucleus, plastid	82.75	84.29
CDX95494	Canola	nucleus, plastid	80.22	83.38
CDY18547	Canola	nucleus, plastid	80.08	83.36
CDX99312	Canola	nucleus, plastid	76.02	82.75
CDY48859	Canola	nucleus, plastid	67.04	69.78
CDY48084	Canola	nucleus, plastid	66.34	68.95
VIT_03s0063g02440.t01	Wine grape	plastid	40.25	67.85
GSMUA_Achr7P26790_001	Banana	plastid	37.31	61.01
CDX75275	Canola	cytosol	29.87	60.51
CDX75434	Canola	nucleus, plastid	55.96	59.38
CDX76282	Canola	nucleus, plastid	54.14	58.4
CDY46249	Canola	nucleus, plastid	54.14	58.13
GSMUA_Achr5P02090_001	Banana	nucleus	47.69	57.82
GSMUA_Achr4P10790_001	Banana	plastid	49.37	55.26
CDX69059	Canola	endoplasmic reticulum, plasma membrane	54.84	54.76
Zm00001d028337_P003	Maize	nucleus	44.6	54.55
KXG39820	Sorghum	plastid	43.62	54.37
CDY65603	Canola	plastid	47.12	54.37
KRH60853	Soybean	cytosol, plastid	48.95	54.11
GSMUA_Achr7P00830_001	Banana	plastid	46.42	53.91
GSMUA_Achr4P32080_001	Banana	plastid	46.42	53.73
HORVU0Hr1G013830.4	Barley	plastid	42.5	53.53
EER91832	Sorghum	plastid	41.66	53.32
Zm00001d030218_P003	Maize	plastid	41.23	52.78
GSMUA_Achr4P03200_001	Banana	mitochondrion, plasma membrane	50.07	52.58
TraesCS5A01G411300.1	Wheat	plastid	42.08	52.36
CDY71995	Canola	nucleus, plastid	31.42	52.34
CDY02546	Canola	plastid	37.59	52.24
CDY47531	Canola	plastid	37.73	52.03
EER90803	Sorghum	plastid	43.9	51.91
CDY59546	Canola	plastid	31.7	51.83
Zm00001d034257_P002	Maize	plastid	42.36	51.54
HORVU2Hr1G061030.8	Barley	plastid	38.15	51.03
Os10t0104800-01	Rice	plastid	40.53	50.88
CDY39543	Canola	plastid	46.0	50.54
TraesCS4A01G077500.1	Wheat	nucleus	43.76	50.24
TraesCS4B01G233600.1	Wheat	nucleus, plastid	43.48	50.16
CDX77417	Canola	plastid	45.72	50.15
TraesCS5B01G415000.1	Wheat	plastid	41.94	48.78
Os07t0137800-00	Rice	plasma membrane	36.47	48.33
EER97954	Sorghum	plastid	38.43	47.9
Solyc10g051330.1.1	Tomato	nucleus	39.69	47.17
PGSC0003DMT400001868	Potato	nucleus, plastid	44.32	46.33
PGSC0003DMT400062758	Potato	nucleus	46.28	46.09
Zm00001d007848_P001	Maize	mitochondrion, plastid	38.57	45.23
Solyc11g044460.1.1	Tomato	nucleus	46.42	45.22
Solyc01g109530.2.1	Tomato	nucleus	43.9	44.84
CDY48706	Canola	cytosol	32.26	43.56
CDY41442	Canola	plastid	37.31	40.36
CDX91719	Canola	plastid	37.03	39.17
CDY03749	Canola	plastid	36.47	38.69
CDY01653	Canola	plastid	35.06	38.05
CDY09439	Canola	plastid	36.19	37.77
CDX74517	Canola	plastid	34.92	37.5
CDY44156	Canola	nucleus	37.31	37.36
CDX68882	Canola	plastid	36.75	37.27
CDY66134	Canola	nucleus	46.7	36.2
HORVU4Hr1G065270.7	Barley	cytosol	24.82	35.98
CDY51639	Canola	nucleus	35.34	35.9
CDX93398	Canola	cytosol	35.76	35.66
CDY59350	Canola	plastid	33.1	35.6
CDY51224	Canola	plastid	47.12	35.52
CDY04245	Canola	plastid	33.52	35.2
CDY07370	Canola	plastid	32.82	35.14
CDY37963	Canola	cytosol	35.34	34.95
CDY11592	Canola	plastid	35.76	34.69
CDY20960	Canola	cytosol	35.34	34.62
CDY20615	Canola	cytosol	34.92	34.25
CDY47133	Canola	cytosol, plastid	35.76	33.91
CDX95997	Canola	plastid	32.68	31.74
CDY16146	Canola	plastid	34.64	29.51
CDY46900	Canola	plasma membrane	30.15	29.09
CDY38610	Canola	plastid	33.8	27.36
CDY10586	Canola	cytosol, nucleus, plasma membrane	22.58	26.66
CDX75728	Canola	cytosol	22.3	26.5
CDY02454	Canola	cytosol, nucleus, plasma membrane	22.3	26.32
CDX82522	Canola	cytosol	23.14	25.11
CDY20711	Canola	cytosol, plasma membrane, plastid	22.72	24.47
CDY32758	Canola	plasma membrane	22.58	24.21
CDY55134	Canola	cytosol	24.54	23.27
CDY51732	Canola	cytosol	24.4	23.14
CDY23630	Canola	cytosol	23.98	23.08
CDX97507	Canola	cytosol, mitochondrion, nucleus	23.7	22.62
CDY32884	Canola	plasma membrane	19.07	22.01
CDY32921	Canola	plasma membrane	20.62	19.6
CDY32757	Canola	plasma membrane	16.83	16.93
CDY48704	Canola	cytosol, mitochondrion, plasma membrane, plastid	8.84	16.24

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.22	Gene3D:3.30.200.20	GO:A0A078CZP9	EnsemblPlants:CDX82325	ProteinID:CDX82325
ProteinID:CDX82325.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00137442001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF07714	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF285
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
TMHMM:TMhelix	UniParc:UPI0004EE019B	SEG:seg	:	:	:

Description

BnaA03g34960D

Coordinates

chrLK031828:+:615124..618386

Molecular Weight (calculated)

75848.3 Da

IEP (calculated)

5.809

GRAVY (calculated)

-0.914

Length

713 amino acids

Sequence
(BLAST)

001: MAEGQSPENS PPSPTPPSPS SPDNTQQQSP PSPDSSSSSS SPSSSPPAPP PPDNSSSSPP PPSSDSQPPP SPQQENNNNN NNNNGGNNDN NNNGNNNGGN
101: NDNNNNGNNN NGGNNDNNNN GNTNNGGNND NNNNGNNNNN GNNGNNSNNG NNGNNNNGNN NNGNNSGGSN NHSPAPPSRN SDRNSPSPPR SLAPPRSSGG
201: GDAPNTGAII GIAAGAGLLL LVMILFCVCC CRKKKKKNPM PYYASNGYAT GKGDQYQQQQ QHYNNQSEHV MNLSHQHPGL NSNNNWMNSP PPPPPQPVSG
301: GVNNGNSSEI YSGPYGPALP PPHPSVALGF NQSTFTYDEL AAATQNFSQA RLLGQGGFGY VHKGILPNGK EIAVKSLKAG SGQGEREFQA EVDIISRVHH
401: RFLVSLVGYC IAEGQKMLLV YEFLPNDTLE FHLHGKSGNV LDWPTRLRIA LGSAKGLAYL HEDCHPKIIH RDIKASNILL DESFEAKVAD FGLAKLSQDN
501: VTHVSTRIMG TFGYLAPEYA SSGKLTDRSD VFSFGVMLLE LITGRRPVDL TGEMEDSLVD WARPLCLNAA QDGDYSELVD PRLEGQYEPY EMARMVACAA
601: AAVRHSARRR PKMSQIVRAL EGDASLEDLN EVKPGQSLGR GSSSDYDSST YSADMRKFRK VAMDSHEYGA TSEYGNTSEY GLDPSSSSSE EIHTGGGSGG
701: ANKNNKTIPS REL

Best Arabidopsis Sequence Match ( AT3G18810.1 )
(BLAST)

001: MAEGQSPENS PPSPTPPSPS SSDNQQQSSP PPSDSSSPSP PAPPPPDDSS NGSPQPPSSD SQSPPSPQGN NNNDGNNGNN NNDNNNNNNG NNNNDNNNGN
101: NKDNNNNGNN NNGNNNNGND NNGNNNNGNN NDNNNQNNGG GSNNRSPPPP SRNSDRNSPS PPRALAPPRS SGGGSNSSGN NEPNTAAIVG IVAGAGLLFL
201: VMILFCVCCC RKKKKKHQMP YYAGNGYATG KGDQYQQQQY NNQSDHVMNL SQQYPGSNGN NNWMNSPPPP PPGSWQPSPP PPPPPVSGGM NGNSSDFSSN
301: YSGPHGPSVP PPHPSVALGF NKSTFTYDEL AAATQGFSQS RLLGQGGFGY VHKGILPNGK EIAVKSLKAG SGQGEREFQA EVDIISRVHH RFLVSLVGYC
401: IAGGQRMLVY EFLPNDTLEF HLHGKSGKVL DWPTRLKIAL GSAKGLAYLH EDCHPRIIHR DIKASNILLD ESFEAKVADF GLAKLSQDNV THVSTRIMGT
501: FGYLAPEYAS SGKLTDRSDV FSFGVMLLEL VTGRRPVDLT GEMEDSLVDW ARPICLNAAQ DGDYSELVDP RLENQYEPHE MAQMVACAAA AVRHSARRRP
601: KMSQIVRALE GDATLDDLSE GGKAGQSSFL GRGSSSDYDS STYSADMKKF RKVALDSHEY GASSEYGNTS EYGLDPSSSS SEEIRRGGAN NNKTTPSRDH

Arabidopsis Description

PERK6Putative proline-rich receptor-like protein kinase PERK6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LS95]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.