CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra024608.1-P	Field mustard	nucleus	94.59	95.27
CDY44156	Canola	nucleus	95.01	93.68
CDY41442	Canola	plastid	77.78	82.85
CDX91719	Canola	plastid	79.2	82.49
AT1G23540.1	Thale cress	nucleus, plastid	78.77	76.81
CDY03749	Canola	plastid	62.68	65.48
CDY09439	Canola	plastid	63.53	65.3
CDY11592	Canola	plastid	63.11	60.27
CDY47133	Canola	cytosol, plastid	63.25	59.04
VIT_01s0127g00670.t01	Wine grape	plastid	52.14	54.46
CDX75275	Canola	cytosol	25.64	51.14
KRG99346	Soybean	plastid	43.45	49.04
CDX92276	Canola	plasma membrane	30.91	45.21
KRH74591	Soybean	nucleus, plastid	44.02	45.04
CDY37963	Canola	cytosol	46.15	44.94
CDX93398	Canola	cytosol	45.73	44.9
KRH69571	Soybean	nucleus, plastid	43.3	44.71
CDY20960	Canola	cytosol	45.44	43.82
GSMUA_Achr6P27340_001	Banana	cytosol, endoplasmic reticulum, plastid	32.48	43.68
CDY20615	Canola	cytosol	45.16	43.6
KRH45666	Soybean	cytosol, nucleus, plastid	44.44	43.45
CDX74517	Canola	plastid	39.89	42.17
CDY02546	Canola	plastid	30.77	42.11
GSMUA_Achr1P13940_001	Banana	plastid	42.31	42.07
CDY01653	Canola	plastid	39.32	42.01
CDY39543	Canola	plastid	38.6	41.76
CDY07370	Canola	plastid	39.6	41.74
Os03t0568800-01	Rice	cytosol, nucleus, plastid	40.03	41.63
CDY47531	Canola	plastid	30.63	41.59
CDX77417	Canola	plastid	38.46	41.54
CDY04245	Canola	plastid	40.03	41.38
CDY59350	Canola	plastid	38.46	40.72
Zm00001d011450_P001	Maize	plastid	39.6	40.7
HORVU3Hr1G057190.2	Barley	plastid	40.17	40.58
TraesCS3B01G259100.1	Wheat	cytosol, plastid	39.74	39.97
TraesCS3A01G229800.1	Wheat	plastid	40.74	39.72
KXG32962	Sorghum	plastid	39.32	39.48
CDY65603	Canola	plastid	34.62	39.32
Os06t0486000-01	Rice	plasma membrane	41.74	39.17
CDX76282	Canola	nucleus, plastid	36.47	38.73
CDY46249	Canola	nucleus, plastid	36.61	38.7
CDX75434	Canola	nucleus, plastid	37.04	38.69
CDX95997	Canola	plastid	40.31	38.56
CDY59546	Canola	plastid	23.5	37.84
CDY71995	Canola	nucleus, plastid	22.93	37.62
TraesCS7B01G131000.1	Wheat	nucleus, plastid	40.31	37.58
TraesCS7D01G232700.1	Wheat	nucleus, plastid	40.17	37.55
CDX95494	Canola	nucleus, plastid	36.47	37.32
CDY18547	Canola	nucleus, plastid	35.9	36.79
CDY48859	Canola	nucleus, plastid	35.76	36.64
CDY48084	Canola	nucleus, plastid	35.47	36.3
CDY61983	Canola	cytosol, plastid	35.9	36.15
CDX69059	Canola	endoplasmic reticulum, plasma membrane	36.75	36.13
Zm00001d037066_P008	Maize	plastid	38.75	36.07
CDX99312	Canola	nucleus, plastid	33.19	35.57
CDY48706	Canola	cytosol	26.64	35.42
CDY16146	Canola	plastid	42.17	35.36
CDX82325	Canola	cytosol, plastid	35.9	35.34
CDX68882	Canola	plastid	33.9	33.85
CDY38610	Canola	plastid	40.74	32.46
CDX75728	Canola	cytosol	25.64	30.0
CDY02454	Canola	cytosol, nucleus, plasma membrane	24.79	28.81
CDY10586	Canola	cytosol, nucleus, plasma membrane	24.79	28.81
CDX82522	Canola	cytosol	26.07	27.85
CDY66134	Canola	nucleus	34.62	26.41
CDY32758	Canola	plasma membrane	24.79	26.17
CDY46900	Canola	plasma membrane	27.49	26.12
CDY51224	Canola	plastid	34.9	25.9
HORVU7Hr1G047750.6	Barley	plastid	29.06	25.89
CDY20711	Canola	cytosol, plasma membrane, plastid	24.07	25.53
CDY23630	Canola	cytosol	26.92	25.51
CDY51732	Canola	cytosol	27.21	25.4
CDY55134	Canola	cytosol	27.21	25.4
CDX97507	Canola	cytosol, mitochondrion, nucleus	26.92	25.3
CDY32884	Canola	plasma membrane	21.37	24.27
CDY32921	Canola	plasma membrane	21.51	20.13
CDY32757	Canola	plasma membrane	17.38	17.21
CDY48704	Canola	cytosol, mitochondrion, plasma membrane, plastid	8.12	14.69

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
MapMan:18.4.1.22	Gene3D:3.30.200.20	GO:A0A078IQH2	UniProt:A0A078IQH2	EnsemblPlants:CDY51639	ProteinID:CDY51639
ProteinID:CDY51639.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00003959001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF07714
PIRSF:PIRSF000641	PRINTS:PR01217	ScanProsite:PS00107	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF36
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	InterPro:SRK-like_kinase	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	TMHMM:TMhelix
UniParc:UPI0004EF2FA1	SEG:seg	:	:	:	:

Description

BnaC05g50860DBnaC05g50860D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IQH2]

Coordinates

chrLK033015:-:4511..7676

Molecular Weight (calculated)

75283.3 Da

IEP (calculated)

5.874

GRAVY (calculated)

-0.609

Length

702 amino acids

Sequence
(BLAST)

001: MSDSDGSPSS SPPADSAPPP DSSSENSAPP PSDSTSTPSP PADLSEPPPS DSEPSPPPPD SILPLPWILT PLTDTPPPDS NSPPEDSNNP QPPPTSTIPP
101: SPPTDSETPP APPYESDNPP PSSDVHHSPP SPSYSSTNPE TPPSQSPSTT PLEPTNSPPA PPSDPTNPLL IQPSAPANSP PGASSFLAPP KPNGGSGGGA
201: VVSPSLTVIP SKVTPPTNGS NGISSQGKIM VGVAVAGGFA IMALIAVCFL VRRKKKRNID SYDHPQYLPH PNFSVKSDGF SYGQDPSKVY SGPGGGSMYN
301: SQQQHSSMGN SYGSQPGHQM QSNSMPDSAI LGTNQTHFSY QELAEITQGF ARHNILGEGG FGCVYKGTLH DGKVVAVKQL KAGSGQGDRE FTAEVEIISR
401: VHHRHLVSLV GYCISDQHRL LIYEYVANQT LEHHLHGKGR PVLEWSKRVR IAIGSAKGLA YLHEDCERLL IFQSKHINHT LHIFFYHSQG HQVADFGLAR
501: LNDTTQTHVS TRVMGTFGYL APEYASSGKL TDRSDVFSFG VVLLELVTGR KPVDQNQPLG EESLVEWARP LLLRAIETGD YSELIDRRLE KHYVEHEVVR
601: MIETAAACVR HSGPKRPRMA QVVRALDCDE DSGDISNGIK VGQSTTYDSG QYNQEIMKFR KMAFGIDDST ESGMNSGGYS GKSSSDFSGN ESETRPFNNR
701: QF

Best Arabidopsis Sequence Match ( AT1G23540.1 )
(BLAST)

001: MSDLGESPSS SPPAPPADTA PPPETPSENS ALPPVDSSPP SPPADSSSTP PLSEPSTPPP DSQLPPLPSI LPPLTDSPPP PSDSSPPVDS TPSPPPPTSN
101: ESPSPPEDSE TPPAPPNESN DNNPPPSQDL QSPPPSSPSP NVGPTNPESP PLQSPPAPPA SDPTNSPPAS PLDPTNPPPI QPSGPATSPP ANPNAPPSPF
201: PTVPPKTPSS GPVVSPSLTS PSKGTPTPNQ GNGDGGGGGG GYQGKTMVGM AVAGFAIMAL IGVVFLVRRK KKRNIDSYNH SQYLPHPNFS VKSDGFLYGQ
301: DPGKGYSSGP NGSMYNNSQQ QQSSMGNSYG TAGGGYPHHQ MQSSGTPDSA ILGSGQTHFS YEELAEITQG FARKNILGEG GFGCVYKGTL QDGKVVAVKQ
401: LKAGSGQGDR EFKAEVEIIS RVHHRHLVSL VGYCISDQHR LLIYEYVSNQ TLEHHLHGKG LPVLEWSKRV RIAIGSAKGL AYLHEDCHPK IIHRDIKSAN
501: ILLDDEYEAQ VADFGLARLN DTTQTHVSTR VMGTFGYLAP EYASSGKLTD RSDVFSFGVV LLELVTGRKP VDQTQPLGEE SLVEWARPLL LKAIETGDLS
601: ELIDTRLEKR YVEHEVFRMI ETAAACVRHS GPKRPRMVQV VRALDCDGDS GDISNGIKIG QSTTYDSGQY NEDIMKFRKM AFGGDNSVES GLYSGNYSAK
701: SSSDFSGNES ETRPFNNRRF

Arabidopsis Description

PERK12Proline-rich receptor-like protein kinase PERK12 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUE0]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.