CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 4
plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH69571	Soybean	nucleus, plastid	88.63	89.41
AT1G70450.1	Thale cress	cytosol	32.22	56.09
KRG99346	Soybean	plastid	47.52	52.41
Bra016342.1-P	Field mustard	plastid	47.81	49.77
CDY41442	Canola	plastid	47.67	49.62
CDX91719	Canola	plastid	48.54	49.41
VIT_01s0127g00670.t01	Wine grape	plastid	48.25	49.26
KRH07595	Soybean	plastid	37.9	48.87
Bra007915.1-P	Field mustard	cytosol, plastid	47.52	48.37
CDY03749	Canola	plastid	47.23	48.21
CDY09439	Canola	plastid	47.23	47.44
AT1G23540.1	Thale cress	nucleus, plastid	49.13	46.81
Bra024608.1-P	Field mustard	nucleus	47.23	46.48
KRH45666	Soybean	cytosol, nucleus, plastid	48.54	46.38
GSMUA_Achr6P27340_001	Banana	cytosol, endoplasmic reticulum, plastid	35.28	46.36
AT1G70460.1	Thale cress	plastid	47.23	45.63
CDY44156	Canola	nucleus	47.23	45.51
TraesCS3B01G259100.1	Wheat	cytosol, plastid	46.06	45.27
HORVU3Hr1G057190.2	Barley	plastid	45.77	45.18
Bra016218.1-P	Field mustard	cytosol, plastid	48.54	44.34
Os03t0568800-01	Rice	cytosol, nucleus, plastid	43.59	44.3
CDY51639	Canola	nucleus	45.04	44.02
KXG32962	Sorghum	plastid	44.75	43.92
Zm00001d011450_P001	Maize	plastid	43.59	43.78
Bra019913.1-P	Field mustard	cytosol, plastid	45.63	43.78
CDX93398	Canola	cytosol	45.48	43.64
TraesCS3A01G229800.1	Wheat	plastid	45.63	43.47
CDY37963	Canola	cytosol	45.63	43.41
CDY11592	Canola	plastid	46.36	43.27
CDY47133	Canola	cytosol, plastid	47.38	43.22
GSMUA_Achr1P13940_001	Banana	plastid	44.46	43.2
AT1G10620.1	Thale cress	cytosol	45.04	43.04
KRH45181	Soybean	plastid	45.34	42.96
CDY20960	Canola	cytosol	45.34	42.72
CDY20615	Canola	cytosol	45.19	42.64
KRH01485	Soybean	plastid	46.5	42.2
KRH39292	Soybean	plastid	40.82	42.17
KRH48383	Soybean	mitochondrion	41.11	42.03
KRH28656	Soybean	nucleus, plastid	38.63	41.93
KRH71097	Soybean	plastid	45.19	41.89
KRH75567	Soybean	plastid	43.29	41.71
KRH47030	Soybean	nucleus, plastid	34.4	41.4
KRH76796	Soybean	nucleus, plastid	38.05	41.17
KRH60853	Soybean	cytosol, plastid	38.63	41.09
KRH08293	Soybean	nucleus	35.86	41.07
Bra018431.1-P	Field mustard	cytosol	42.13	40.65
KRH69932	Soybean	plastid	36.01	40.62
TraesCS7B01G131000.1	Wheat	nucleus, plastid	42.13	38.38
TraesCS7D01G232700.1	Wheat	nucleus, plastid	41.98	38.35
Os06t0486000-01	Rice	plasma membrane	41.55	38.1
KRH47029	Soybean	plastid	30.47	37.86
KRH62013	Soybean	plastid	30.17	37.5
KRH52669	Soybean	plastid	35.71	36.4
Zm00001d037066_P008	Maize	plastid	38.63	35.15
KRH56245	Soybean	cytosol	17.49	33.8
KRH09998	Soybean	cytosol	24.93	24.43
KRH23335	Soybean	cytosol	24.2	24.2
KRH41431	Soybean	cytosol, nucleus, plasma membrane	23.62	24.07
HORVU7Hr1G047750.6	Barley	plastid	27.55	23.98
KRH47146	Soybean	cytosol	25.8	23.6
KRH44172	Soybean	cytosol	25.8	23.6
KRH60141	Soybean	cytosol	23.62	23.14
KRH56244	Soybean	cytosol	19.53	22.0
KRH18072	Soybean	cytosol	18.66	21.3
KRH20591	Soybean	cytosol	20.85	21.28
KRH53345	Soybean	cytosol	18.8	21.08
KRH62713	Soybean	cytosol	20.41	20.06
KRH15276	Soybean	cytosol	21.28	19.7
KRH05755	Soybean	cytosol	20.41	19.66
KRH64578	Soybean	cytosol	15.45	18.76

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100807815	MapMan:18.4.1.22	Gene3D:3.30.200.20	EMBL:ACUP02000049	EnsemblPlantsGene:GLYMA_01G030200
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004675
GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166	GO:GO:0007178
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	UniProt:I1J590	InterPro:IPR000719
EnsemblPlants:KRH74591	ProteinID:KRH74591	ProteinID:KRH74591.1	InterPro:Kinase-like_dom_sf	PFAM:PF07714	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF36	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI0002336FEE	SEG:seg	:

Description

hypothetical protein

Coordinates

chr1:-:3167272..3172978

Molecular Weight (calculated)

73773.8 Da

IEP (calculated)

7.843

GRAVY (calculated)

-0.649

Length

686 amino acids

Sequence
(BLAST)

001: MAKNTSSNES SSLNSDKDKA SAPLPSSDDS ESPKSTPPKS PPPSPPLPPS PPKKSAPPPT ESPPAPAHSS PPTPSQSPPP TPPHSPPPSP SPPTPPPEKS
101: PPSPSNSPPP PSTPPPSKDS APPPSPSEPP PSPPPSPPPP PPQNSPPSPQ SLTPPPHSLS PPTAISTPPS PASHVTPPPA PLGSGPNHPS PPRPPPSTQP
201: KPRGTPPKSD PPSSSPSSGN NTGEIVGLAL AGVFIIAFLA LVIFFMFGRK QKRASVYAMP PPRKSHMKGG DVHYYVEEPG FGSGALGAMN LRTPSETTQH
301: MNTGQLVFTY EKVAEITNGF ASENIIGEGG FGYVYKASMP DGRVGALKLL KAGSGQGERE FRAEVDIISR IHHRHLVSLI GYCISEQQRV LIYEFVPNGN
401: LSQHLHGSKW PILDWPKRMK IAIGSARGLA YLHDGCNPKI IHRDIKSANI LLDNAYEAQV ADFGLARLTD DANTHVSTRV MGTFGYMAPE YATSGKLTDR
501: SDVFSFGVVL LELITGRKPV DPMQPIGEES LVEWARPLLL RAVETGDYGK LVDPRLERQY VDSEMFRMIE TAAACVRHSA PKRPRMVQVA RSLDSGNQLY
601: DLSNGVKYGQ STVYDSGQYN EDIEIFKRMV NGSFDDSEFD MNSMEYRSTV SREMSGSRHS RMPYSEGSDS DFRVFHGQRS NTQNMS

Best Arabidopsis Sequence Match ( AT1G70460.1 )
(BLAST)

001: MSDSPTSSPP APSADSAPPP DTSSDGSAAP PPTDSAPPPS PPADSSPPPA LPSLPPAVFS PPPTVSSPPP PPLDSSPPPP PDLTPPPSSP PPPDAPPPIP
101: IVFPPPIDSP PPESTNSPPP PEVFEPPPPP ADEDESPPAP PPPEQLPPPA SSPQGGPKKP KKHHPGPATS PPAPSAPATS PPAPPNAPPR NSSHALPPKS
201: TAAGGPLTSP SRGVPSSGNS VPPPANSGGG YQGKTMAGFA IAGFAVIALM AVVFLVRRKK KRNIDAYSDS QYLPPSNFSI KSDGFLYGQN PTKGYSGPGG
301: YNSQQQSNSG NSFGSQRGGG GYTRSGSAPD SAVMGSGQTH FTYEELTDIT EGFSKHNILG EGGFGCVYKG KLNDGKLVAV KQLKVGSGQG DREFKAEVEI
401: ISRVHHRHLV SLVGYCIADS ERLLIYEYVP NQTLEHHLHG KGRPVLEWAR RVRIAIGSAK GLAYLHEDCH PKIIHRDIKS ANILLDDEFE AQVADFGLAK
501: LNDSTQTHVS TRVMGTFGYL APEYAQSGKL TDRSDVFSFG VVLLELITGR KPVDQYQPLG EESLVEWARP LLHKAIETGD FSELVDRRLE KHYVENEVFR
601: MIETAAACVR HSGPKRPRMV QVVRALDSEG DMGDISNGNK VGQSSAYDSG QYNNDTMKFR KMAFGFDDSS DSGMYSGDYS VQDSRKGSNG ASSEFTRNET
701: ENRNFNNRRY

Arabidopsis Description

PERK13RHS10 [Source:UniProtKB/TrEMBL;Acc:A0A178WB53]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.