Factsheet for AT1G23540.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 3
plastid 2
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra016342.1-P	Field mustard	plastid	77.36	84.52
CDY41442	Canola	plastid	77.36	84.52
CDX91719	Canola	plastid	78.89	84.27
Bra024608.1-P	Field mustard	nucleus	78.75	81.35
CDY44156	Canola	nucleus	79.03	79.92
CDY51639	Canola	nucleus	76.81	78.77
AT1G70450.1	Thale cress	cytosol	39.31	71.83
AT1G70460.1	Thale cress	plastid	67.36	68.31
VIT_01s0127g00670.t01	Wine grape	plastid	52.36	56.1
KRG99346	Soybean	plastid	45.0	52.09
AT1G10620.1	Thale cress	cytosol	49.58	49.72
KRH74591	Soybean	nucleus, plastid	46.81	49.13
GSMUA_Achr6P27340_001	Banana	cytosol, endoplasmic reticulum, plastid	35.14	48.47
KRH69571	Soybean	nucleus, plastid	45.69	48.38
GSMUA_Achr1P13940_001	Banana	plastid	45.69	46.6
AT3G24540.1	Thale cress	cytosol	30.83	46.35
KRH45666	Soybean	cytosol, nucleus, plastid	45.97	46.1
AT5G38560.1	Thale cress	plastid	43.47	45.96
Os03t0568800-01	Rice	cytosol, nucleus, plastid	43.06	45.93
AT1G52290.1	Thale cress	plastid	32.36	45.78
Zm00001d011450_P001	Maize	plastid	42.78	45.1
HORVU3Hr1G057190.2	Barley	plastid	42.78	44.32
KXG32962	Sorghum	plastid	42.5	43.78
TraesCS3B01G259100.1	Wheat	cytosol, plastid	42.36	43.7
TraesCS3A01G229800.1	Wheat	plastid	43.19	43.19
AT3G24550.1	Thale cress	plastid	39.03	43.1
Os06t0486000-01	Rice	plasma membrane	44.44	42.78
AT1G68690.2	Thale cress	plastid	40.97	41.67
TraesCS7D01G232700.1	Wheat	nucleus, plastid	43.33	41.54
TraesCS7B01G131000.1	Wheat	nucleus, plastid	43.33	41.43
AT2G18470.3	Thale cress	plastid	36.39	41.39
AT4G34440.1	Thale cress	plastid	37.64	40.45
AT1G26150.1	Thale cress	plastid	41.53	39.24
Zm00001d037066_P008	Maize	plastid	40.83	38.99
AT3G18810.1	Thale cress	nucleus, plastid	37.36	38.43
AT1G49270.1	Thale cress	cytosol, plastid	36.81	37.91
AT4G32710.1	Thale cress	plastid	36.39	35.84
HORVU7Hr1G047750.6	Barley	plastid	30.69	28.05
AT1G55200.2	Thale cress	cytosol	25.0	26.63
AT5G56790.1	Thale cress	cytosol, plasma membrane, plastid	24.58	26.46
AT3G13690.1	Thale cress	cytosol	26.67	25.5

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.22	Gene3D:3.30.200.20	EntrezGene:838963	ProteinID:AAC98010.1	ProteinID:AAF79592.1
ProteinID:AEE30401.1	ProteinID:ANM57759.1	ArrayExpress:AT1G23540	EnsemblPlantsGene:AT1G23540	RefSeq:AT1G23540	TAIR:AT1G23540
RefSeq:AT1G23540-TAIR-G	EnsemblPlants:AT1G23540.1	TAIR:AT1G23540.1	Unigene:At.49307	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468
GO:GO:0007154	GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0019538	GO:GO:0032502	GO:GO:0038023	Symbol:IGI1	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
RefSeq:NP_001320243.1	RefSeq:NP_173768.2	PFAM:PF07714	PO:PO:0001016	PO:PO:0001017	PO:PO:0007616
PO:PO:0009005	PO:PO:0009046	PO:PO:0009066	PO:PO:0025195	PO:PO:0025281	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF36	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
UniProt:Q9ZUE0	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix
UniParc:UPI000034F3D3	SEG:seg	:	:	:	:

Description

PERK12Proline-rich receptor-like protein kinase PERK12 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUE0]

Coordinates

chr1:-:8346827..8349786

Molecular Weight (calculated)

76306.5 Da

IEP (calculated)

5.183

GRAVY (calculated)

-0.646

Length

720 amino acids

Sequence
(BLAST)

001: MSDLGESPSS SPPAPPADTA PPPETPSENS ALPPVDSSPP SPPADSSSTP PLSEPSTPPP DSQLPPLPSI LPPLTDSPPP PSDSSPPVDS TPSPPPPTSN
101: ESPSPPEDSE TPPAPPNESN DNNPPPSQDL QSPPPSSPSP NVGPTNPESP PLQSPPAPPA SDPTNSPPAS PLDPTNPPPI QPSGPATSPP ANPNAPPSPF
201: PTVPPKTPSS GPVVSPSLTS PSKGTPTPNQ GNGDGGGGGG GYQGKTMVGM AVAGFAIMAL IGVVFLVRRK KKRNIDSYNH SQYLPHPNFS VKSDGFLYGQ
301: DPGKGYSSGP NGSMYNNSQQ QQSSMGNSYG TAGGGYPHHQ MQSSGTPDSA ILGSGQTHFS YEELAEITQG FARKNILGEG GFGCVYKGTL QDGKVVAVKQ
401: LKAGSGQGDR EFKAEVEIIS RVHHRHLVSL VGYCISDQHR LLIYEYVSNQ TLEHHLHGKG LPVLEWSKRV RIAIGSAKGL AYLHEDCHPK IIHRDIKSAN
501: ILLDDEYEAQ VADFGLARLN DTTQTHVSTR VMGTFGYLAP EYASSGKLTD RSDVFSFGVV LLELVTGRKP VDQTQPLGEE SLVEWARPLL LKAIETGDLS
601: ELIDTRLEKR YVEHEVFRMI ETAAACVRHS GPKRPRMVQV VRALDCDGDS GDISNGIKIG QSTTYDSGQY NEDIMKFRKM AFGGDNSVES GLYSGNYSAK
701: SSSDFSGNES ETRPFNNRRF

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.