Factsheet for Bra024608.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 2
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY44156	Canola	nucleus	99.43	97.33
CDY51639	Canola	nucleus	95.27	94.59
Bra016342.1-P	Field mustard	plastid	80.49	85.13
AT1G23540.1	Thale cress	nucleus, plastid	81.35	78.75
Bra007915.1-P	Field mustard	cytosol, plastid	65.85	68.1
Bra016218.1-P	Field mustard	cytosol, plastid	66.57	61.78
Bra004022.1-P	Field mustard	plastid	33.43	59.9
Bra034626.1-P	Field mustard	cytosol, nucleus, plastid	32.14	57.73
VIT_01s0127g00670.t01	Wine grape	plastid	54.66	56.7
Bra037558.1-P	Field mustard	cytosol	22.38	53.24
Bra011374.1-P	Field mustard	peroxisome	27.55	53.04
KRG99346	Soybean	plastid	45.91	51.45
Bra022359.1-P	Field mustard	plasma membrane	33.43	48.54
KRH74591	Soybean	nucleus, plastid	46.48	47.23
Bra019913.1-P	Field mustard	cytosol, plastid	48.21	46.99
KRH69571	Soybean	nucleus, plastid	45.77	46.91
GSMUA_Achr6P27340_001	Banana	cytosol, endoplasmic reticulum, plastid	34.86	46.55
KRH45666	Soybean	cytosol, nucleus, plastid	46.92	45.54
Bra028192.1-P	Field mustard	plastid	42.61	44.39
Bra018431.1-P	Field mustard	cytosol	45.19	44.3
GSMUA_Achr1P13940_001	Banana	plastid	44.76	44.19
Bra014321.1-P	Field mustard	plastid	32.71	44.1
Os03t0568800-01	Rice	cytosol, nucleus, plastid	42.61	44.0
Bra015053.1-P	Field mustard	plastid	40.03	43.32
Zm00001d011450_P001	Maize	plastid	42.18	43.05
HORVU3Hr1G057190.2	Barley	plastid	42.75	42.88
TraesCS3B01G259100.1	Wheat	cytosol, plastid	42.18	42.12
TraesCS3A01G229800.1	Wheat	plastid	43.19	41.81
KXG32962	Sorghum	plastid	41.89	41.77
Bra039607.1-P	Field mustard	nucleus	36.3	41.48
Os06t0486000-01	Rice	plasma membrane	44.05	41.04
Bra038894.1-P	Field mustard	cytosol	9.76	40.96
Bra011534.1-P	Field mustard	nucleus, plastid	39.02	40.48
TraesCS7B01G131000.1	Wheat	nucleus, plastid	43.19	39.97
TraesCS7D01G232700.1	Wheat	nucleus, plastid	42.9	39.81
Bra028371.1-P	Field mustard	plastid	37.59	39.7
Bra018782.1-P	Field mustard	plastid	37.88	38.88
Zm00001d037066_P008	Maize	plastid	41.03	37.93
Bra001723.1-P	Field mustard	cytosol, plastid	38.02	37.86
Bra024725.1-P	Field mustard	plastid	40.75	34.68
Bra004331.1-P	Field mustard	plastid	42.47	34.18
Bra021251.1-P	Field mustard	cytosol	5.02	31.53
Bra001520.1-P	Field mustard	cytosol	26.83	30.86
Bra030880.1-P	Field mustard	cytosol	25.82	29.8
Bra037220.1-P	Field mustard	nucleus	36.73	27.95
HORVU7Hr1G047750.6	Barley	plastid	31.42	27.79
Bra035630.1-P	Field mustard	cytosol, plasma membrane, plastid	25.25	26.63
Bra021501.1-P	Field mustard	cytosol	28.26	26.2
Bra027408.1-P	Field mustard	cytosol, mitochondrion, nucleus	27.98	26.1
Bra021250.1-P	Field mustard	plasma membrane	32.28	24.73
Bra035231.1-P	Field mustard	plasma membrane	25.25	20.85
Bra021253.1-P	Field mustard	plasma membrane	25.11	15.49
Bra002791.1-P	Field mustard	plasma membrane	26.83	15.45

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
MapMan:18.4.1.22	Gene3D:3.30.200.20	EnsemblPlantsGene:Bra024608	EnsemblPlants:Bra024608.1	EnsemblPlants:Bra024608.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M4E753	PFAM:PF07714	PIRSF:PIRSF000641	PRINTS:PR01217
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF36	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	InterPro:SRK-like_kinase	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
TMHMM:TMhelix	UniParc:UPI000254297F	SEG:seg	:	:	:

Description

AT1G23540 (E=1e-233) | protein kinase family protein

Coordinates

chrA09:+:24080895..24083819

Molecular Weight (calculated)

74592.6 Da

IEP (calculated)

5.346

GRAVY (calculated)

-0.603

Length

697 amino acids

Sequence
(BLAST)

001: MSDSDGSPSS SPPADSAPPP DSSLDNSAPP PTDSTSTPSP PADLSEPPPS DSEPSPPPPD SILPLPWILT PLTDTPPPDS NSPPEDSIIP QPPPTSTKSP
101: SPPTDSETPP APPYESDNPP PSSDVHSPPS PSYSSTIPET PPSQSPSTTP LEPTNSPPAP PSDPTNPLLI QPSAPANSPP GASTFLAPPK PNGGSGGGAV
201: VSPSLTVPSK VTPPTNGSNG ISSQGKIMVG VAVAGGFAIM ALVAVCFLVR RKKKRNIDSY DHPQYLPHPN FSVKSDGFSY GQDPSKVYSG PGGGSMYNSQ
301: QQQSSMGNSY GSQPGHQMQS NSMPDSAILG TNQTHFSYQE LAEITQGFAR HNILGEGGFG CVYKGTLHDG KVVAVKQLKA GSGQGDREFT AEVEIISRVH
401: HRHLVSLVGY CISDQHRLLI YEYVENQTLE HHLHGKGRPV LEWSKRVRIA IGSAKGLAYL HEDCHPKIIH RDIKSANILL DDEYEAQVAD FGLARLNDTT
501: QTHVSTRVMG TFGYLAPEYA SSGKLTDRSD VFSFGVVLLE LVTGRKPVDQ NQPLGEESLV EWARPLLLRA IETGDYSELI DRRLEKHYVE HEVVRMIETA
601: AACVRHSGPK RPRMAQVVRA LDCDEDSGDI SNGIKVGQST TYDSGQYNQE IMKFRKMAFG IDDSTESGMN SGGYSGKSSS DFSGNKSEPR PFNNRQF

Best Arabidopsis Sequence Match ( AT1G23540.1 )
(BLAST)

001: MSDLGESPSS SPPAPPADTA PPPETPSENS ALPPVDSSPP SPPADSSSTP PLSEPSTPPP DSQLPPLPSI LPPLTDSPPP PSDSSPPVDS TPSPPPPTSN
101: ESPSPPEDSE TPPAPPNESN DNNPPPSQDL QSPPPSSPSP NVGPTNPESP PLQSPPAPPA SDPTNSPPAS PLDPTNPPPI QPSGPATSPP ANPNAPPSPF
201: PTVPPKTPSS GPVVSPSLTS PSKGTPTPNQ GNGDGGGGGG GYQGKTMVGM AVAGFAIMAL IGVVFLVRRK KKRNIDSYNH SQYLPHPNFS VKSDGFLYGQ
301: DPGKGYSSGP NGSMYNNSQQ QQSSMGNSYG TAGGGYPHHQ MQSSGTPDSA ILGSGQTHFS YEELAEITQG FARKNILGEG GFGCVYKGTL QDGKVVAVKQ
401: LKAGSGQGDR EFKAEVEIIS RVHHRHLVSL VGYCISDQHR LLIYEYVSNQ TLEHHLHGKG LPVLEWSKRV RIAIGSAKGL AYLHEDCHPK IIHRDIKSAN
501: ILLDDEYEAQ VADFGLARLN DTTQTHVSTR VMGTFGYLAP EYASSGKLTD RSDVFSFGVV LLELVTGRKP VDQTQPLGEE SLVEWARPLL LKAIETGDLS
601: ELIDTRLEKR YVEHEVFRMI ETAAACVRHS GPKRPRMVQV VRALDCDGDS GDISNGIKIG QSTTYDSGQY NEDIMKFRKM AFGGDNSVES GLYSGNYSAK
701: SSSDFSGNES ETRPFNNRRF

Arabidopsis Description

PERK12Proline-rich receptor-like protein kinase PERK12 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUE0]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.