Factsheet for GSMUA_Achr1P13940_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plasma membrane 1
plastid 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P27340_001	Banana	cytosol, endoplasmic reticulum, plastid	50.0	67.62
AT1G70450.1	Thale cress	cytosol	32.58	58.38
GSMUA_Achr8P29720_001	Banana	mitochondrion	32.01	56.64
GSMUA_Achr5P06880_001	Banana	plastid	32.01	54.59
GSMUA_Achr8P19800_001	Banana	cytosol	31.3	53.64
Zm00001d011450_P001	Maize	plastid	49.86	51.54
GSMUA_Achr10P...	Banana	plastid	35.69	51.43
Os03t0568800-01	Rice	cytosol, nucleus, plastid	48.73	50.96
GSMUA_Achr7P26790_001	Banana	plastid	31.44	50.92
HORVU3Hr1G057190.2	Barley	plastid	49.43	50.22
KXG32962	Sorghum	plastid	49.43	49.93
GSMUA_Achr7P14360_001	Banana	plastid	38.1	49.63
TraesCS3B01G259100.1	Wheat	cytosol, plastid	48.73	49.28
Bra016342.1-P	Field mustard	plastid	45.47	48.71
CDY41442	Canola	plastid	45.47	48.71
VIT_01s0127g00670.t01	Wine grape	plastid	45.89	48.21
TraesCS3A01G229800.1	Wheat	plastid	49.01	48.06
CDX91719	Canola	plastid	45.75	47.92
GSMUA_Achr1P25240_001	Banana	mitochondrion	32.29	47.6
GSMUA_Achr2P09600_001	Banana	plastid	43.77	47.03
CDY03749	Canola	plastid	44.62	46.88
KRG99346	Soybean	plastid	41.08	46.62
Bra007915.1-P	Field mustard	cytosol, plastid	44.48	46.59
AT1G23540.1	Thale cress	nucleus, plastid	46.6	45.69
CDY09439	Canola	plastid	44.19	45.68
GSMUA_Achr2P14510_001	Banana	plastid	42.49	45.66
AT1G70460.1	Thale cress	plastid	45.89	45.63
Os06t0486000-01	Rice	plasma membrane	47.59	44.92
Bra024608.1-P	Field mustard	nucleus	44.19	44.76
GSMUA_Achr4P24400_001	Banana	plastid	41.64	44.48
KRH74591	Soybean	nucleus, plastid	43.2	44.46
KRH69571	Soybean	nucleus, plastid	42.63	44.26
GSMUA_Achr4P10790_001	Banana	plastid	39.8	44.11
TraesCS7B01G131000.1	Wheat	nucleus, plastid	46.74	43.82
CDY44156	Canola	nucleus	44.05	43.68
GSMUA_Achr10P...	Banana	plastid	33.99	43.64
GSMUA_Achr10P...	Banana	plastid	44.19	43.51
TraesCS7D01G232700.1	Wheat	nucleus, plastid	46.18	43.41
GSMUA_Achr5P02090_001	Banana	nucleus	36.12	43.37
AT1G10620.1	Thale cress	cytosol	44.05	43.31
Bra019913.1-P	Field mustard	cytosol, plastid	43.48	42.94
CDY37963	Canola	cytosol	43.77	42.86
CDX93398	Canola	cytosol	43.34	42.8
Bra016218.1-P	Field mustard	cytosol, plastid	45.33	42.61
CDY11592	Canola	plastid	44.19	42.45
CDY51639	Canola	nucleus	42.07	42.31
KRH45666	Soybean	cytosol, nucleus, plastid	42.78	42.06
GSMUA_Achr7P00830_001	Banana	plastid	36.54	42.02
CDY20960	Canola	cytosol	43.06	41.76
CDY20615	Canola	cytosol	42.92	41.68
CDY47133	Canola	cytosol, plastid	44.05	41.36
GSMUA_Achr4P03200_001	Banana	mitochondrion, plasma membrane	39.24	40.8
GSMUA_Achr10P...	Banana	cytosol	34.56	40.67
GSMUA_Achr4P32080_001	Banana	plastid	35.41	40.58
Bra018431.1-P	Field mustard	cytosol	39.94	39.66
GSMUA_Achr7P14350_001	Banana	plasma membrane	25.21	39.21
GSMUA_Achr7P14330_001	Banana	plasma membrane	24.08	38.9
Zm00001d037066_P008	Maize	plastid	40.23	37.67
GSMUA_Achr3P15710_001	Banana	plastid	37.68	36.44
GSMUA_Achr8P13750_001	Banana	cytosol, nucleus, plastid	36.4	29.3
HORVU7Hr1G047750.6	Barley	plastid	30.17	27.03
GSMUA_Achr6P26510_001	Banana	cytosol	25.07	24.72
GSMUA_Achr6P18630_001	Banana	cytosol, nucleus, plasma membrane	18.7	24.58
GSMUA_Achr1P04890_001	Banana	cytosol	24.22	24.12
GSMUA_Achr9P05910_001	Banana	plasma membrane	24.79	23.74
GSMUA_Achr8P04820_001	Banana	cytosol, plasma membrane, plastid	21.67	20.26
GSMUA_Achr5P07770_001	Banana	cytosol	20.25	19.02

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
Gene3D:3.30.200.20	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr1G13940_001	EnsemblPlants:GSMUA_Achr1P13940_001	EnsemblPlants:GSMUA_Achr1T13940_001
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0RZQ2	PFAM:PF00069	PIRSF:PIRSF000641	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF36	InterPro:Prot_kinase_dom	SMART:SM00220	InterPro:SRK-like_kinase
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI00029486B2	SEG:seg	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr1G13940_001]

Coordinates

chr1:-:10647979..10651056

Molecular Weight (calculated)

75147.4 Da

IEP (calculated)

7.093

GRAVY (calculated)

-0.404

Length

706 amino acids

Sequence
(BLAST)

001: MSESAPSPAT PSSDLTSPPP VASPPTLPSP AAASPPPSTS QSPSPPSPTQ PPPVAPAPLP AEKSTPPPPT PTPPSTSNES FTPPPAVSSS PPPPPPPKTV
101: SPVPTPPPYD SASPPPPPLP ASSPPPTPAS DSKFPPPPPD APVVVTAPPT PISTPSPPSP PTQTTPPGSA LSPPSTSTPA PSTTAAPPPA TPTQINTPPP
201: PAYTSLRPSS TSSTKNSTAS PSTTPSAHSN DNSVAKTLVG IAVAGALVAL AVIFFVALRK KKRSTKGSRG QYRHPPGQIA FPKSLYGSNS GQFTYDELMG
301: ITSGFSRDNH IGEGGFGPVY KGTLPDGRQV AVKQLKIGSG QGEREFRAEV EIISRIHHRH LVSLVGYCIV EHHRLLVYEF VSNKTLEHHL HGEGLPVLDW
401: AKRTRIAIGS ARGLAYLHED CHPRIIHRDI KSANILLDES FEAQAKFFTY ACCYFSKALT GTQVADFGLA KLSNDAHTHV STRVMGTFGY LAPEYASSGK
501: LTDRSDVYSF GVVLLELITG RKPVDPSQPL GDESLVEWAR PLLVHALETG EYEELVDPKL ENNFAKSDML QMIEAAAACV RHSAPKRPRM VQVLRALDGG
601: GSLPDLSNGV KFGQSTVYDS GKYSADIEKL QKIAFGSNTF SIDYDHSTEH EHDEQQSVTQ TQTQSSNGCR EPCDRTTFFS SELLPILESY KTKQVIAFPM
701: FYIYYI

Best Arabidopsis Sequence Match ( AT1G23540.1 )
(BLAST)

001: MSDLGESPSS SPPAPPADTA PPPETPSENS ALPPVDSSPP SPPADSSSTP PLSEPSTPPP DSQLPPLPSI LPPLTDSPPP PSDSSPPVDS TPSPPPPTSN
101: ESPSPPEDSE TPPAPPNESN DNNPPPSQDL QSPPPSSPSP NVGPTNPESP PLQSPPAPPA SDPTNSPPAS PLDPTNPPPI QPSGPATSPP ANPNAPPSPF
201: PTVPPKTPSS GPVVSPSLTS PSKGTPTPNQ GNGDGGGGGG GYQGKTMVGM AVAGFAIMAL IGVVFLVRRK KKRNIDSYNH SQYLPHPNFS VKSDGFLYGQ
301: DPGKGYSSGP NGSMYNNSQQ QQSSMGNSYG TAGGGYPHHQ MQSSGTPDSA ILGSGQTHFS YEELAEITQG FARKNILGEG GFGCVYKGTL QDGKVVAVKQ
401: LKAGSGQGDR EFKAEVEIIS RVHHRHLVSL VGYCISDQHR LLIYEYVSNQ TLEHHLHGKG LPVLEWSKRV RIAIGSAKGL AYLHEDCHPK IIHRDIKSAN
501: ILLDDEYEAQ VADFGLARLN DTTQTHVSTR VMGTFGYLAP EYASSGKLTD RSDVFSFGVV LLELVTGRKP VDQTQPLGEE SLVEWARPLL LKAIETGDLS
601: ELIDTRLEKR YVEHEVFRMI ETAAACVRHS GPKRPRMVQV VRALDCDGDS GDISNGIKIG QSTTYDSGQY NEDIMKFRKM AFGGDNSVES GLYSGNYSAK
701: SSSDFSGNES ETRPFNNRRF

Arabidopsis Description

PERK12Proline-rich receptor-like protein kinase PERK12 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUE0]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.