CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 4
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY03749	Canola	plastid	95.02	96.58
Bra007915.1-P	Field mustard	cytosol, plastid	94.58	95.85
AT1G70460.1	Thale cress	plastid	82.87	79.72
CDY11592	Canola	plastid	82.87	77.01
AT1G70450.1	Thale cress	cytosol	43.48	75.38
CDY47133	Canola	cytosol, plastid	82.28	74.73
CDY41442	Canola	plastid	68.23	70.71
CDX91719	Canola	plastid	68.96	69.88
CDY44156	Canola	nucleus	68.52	65.73
CDY51639	Canola	nucleus	65.3	63.53
VIT_01s0127g00670.t01	Wine grape	plastid	54.76	55.65
CDX75275	Canola	cytosol	28.4	55.11
KRG99346	Soybean	plastid	46.27	50.8
KRH69571	Soybean	nucleus, plastid	47.58	47.79
CDX93398	Canola	cytosol	49.78	47.55
CDX92276	Canola	plasma membrane	33.38	47.5
KRH74591	Soybean	nucleus, plastid	47.44	47.23
CDY37963	Canola	cytosol	49.78	47.16
GSMUA_Achr6P27340_001	Banana	cytosol, endoplasmic reticulum, plastid	35.72	46.74
CDY20960	Canola	cytosol	48.9	45.88
CDY20615	Canola	cytosol	48.61	45.67
CDX74517	Canola	plastid	43.48	44.73
KRH45666	Soybean	cytosol, nucleus, plastid	46.85	44.57
GSMUA_Achr1P13940_001	Banana	plastid	45.68	44.19
CDY01653	Canola	plastid	42.46	44.14
CDY04245	Canola	plastid	43.78	44.04
CDY02546	Canola	plastid	32.94	43.86
Os03t0568800-01	Rice	cytosol, nucleus, plastid	42.9	43.41
CDY07370	Canola	plastid	42.31	43.39
CDY47531	Canola	plastid	32.8	43.33
Zm00001d011450_P001	Maize	plastid	43.19	43.19
CDY39543	Canola	plastid	40.85	42.99
CDX77417	Canola	plastid	40.7	42.77
HORVU3Hr1G057190.2	Barley	plastid	43.48	42.73
TraesCS3B01G259100.1	Wheat	cytosol, plastid	43.19	42.26
CDY59350	Canola	plastid	40.85	42.08
KXG32962	Sorghum	plastid	42.9	41.92
Os06t0486000-01	Rice	plasma membrane	45.24	41.31
TraesCS3A01G229800.1	Wheat	plastid	43.48	41.25
CDX76282	Canola	nucleus, plastid	39.24	40.54
CDX75434	Canola	nucleus, plastid	39.82	40.48
CDX95997	Canola	plastid	43.48	40.46
CDY65603	Canola	plastid	36.6	40.45
CDY46249	Canola	nucleus, plastid	39.24	40.36
CDY71995	Canola	nucleus, plastid	24.89	39.72
CDY59546	Canola	plastid	25.33	39.68
TraesCS7B01G131000.1	Wheat	nucleus, plastid	43.34	39.31
TraesCS7D01G232700.1	Wheat	nucleus, plastid	43.05	39.15
Zm00001d037066_P008	Maize	plastid	42.9	38.86
CDY48859	Canola	nucleus, plastid	38.8	38.69
CDY48084	Canola	nucleus, plastid	38.8	38.63
CDX95494	Canola	nucleus, plastid	38.65	38.48
CDY18547	Canola	nucleus, plastid	38.21	38.1
CDX69059	Canola	endoplasmic reticulum, plasma membrane	39.24	37.53
CDY48706	Canola	cytosol	28.99	37.5
CDY61983	Canola	cytosol, plastid	37.92	37.16
CDX99312	Canola	nucleus, plastid	35.58	37.1
CDX68882	Canola	plastid	37.63	36.56
CDY16146	Canola	plastid	44.66	36.44
CDX82325	Canola	cytosol, plastid	37.77	36.19
CDY38610	Canola	plastid	45.1	34.96
CDX75728	Canola	cytosol	26.06	29.67
CDX82522	Canola	cytosol	27.38	28.46
CDY10586	Canola	cytosol, nucleus, plasma membrane	24.74	27.98
CDY02454	Canola	cytosol, nucleus, plasma membrane	24.6	27.81
HORVU7Hr1G047750.6	Barley	plastid	32.06	27.79
CDY66134	Canola	nucleus	37.19	27.61
CDY46900	Canola	plasma membrane	29.28	27.06
CDY51224	Canola	plastid	37.34	26.96
CDY32758	Canola	plasma membrane	25.92	26.62
CDY20711	Canola	cytosol, plasma membrane, plastid	25.04	25.83
CDY23630	Canola	cytosol	27.67	25.51
CDX97507	Canola	cytosol, mitochondrion, nucleus	27.82	25.44
CDY32884	Canola	plasma membrane	22.55	24.92
CDY51732	Canola	cytosol	27.38	24.87
CDY55134	Canola	cytosol	27.23	24.73
CDY32921	Canola	plasma membrane	23.28	21.2
CDY32757	Canola	plasma membrane	18.59	17.91
CDY48704	Canola	cytosol, mitochondrion, plasma membrane, plastid	8.64	15.21

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.22	Gene3D:3.30.200.20	GO:A0A078F8V3	UniProt:A0A078F8V3	EnsemblPlants:CDY09439
ProteinID:CDY09439	ProteinID:CDY09439.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00030942001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PRINTS:PR01217
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF36	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix
UniParc:UPI0004EDB8E9	SEG:seg	:	:	:	:

Description

BnaC02g19810DBnaC02g19810D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F8V3]

Coordinates

chrLK031996:+:17666..22706

Molecular Weight (calculated)

72945.0 Da

IEP (calculated)

6.242

GRAVY (calculated)

-0.693

Length

683 amino acids

Sequence
(BLAST)

001: MSDSPTSSPP APSADSSPPP DNSTGGSAPP PTDSSPPPSP PADSAPPPSI PSPPPATPPP ESNPPPPPPD SSPPPPPDAP PPSDPLPPVD SGSPPPEPTN
101: SPPPPPEEFE SPPPPPNEDN TSPPSPPEQS PPPPPLAPSP KGGSKKPKKS PAPTNSPPAP PNAPSHALPP KSTGAGGPLK SPSRGVPSFP PPPPTSNDGG
201: YQGKTMAGMA VAGFAIIALI AVVFLVRRKK KRNVDVYTDS QYLPPSNFSI KSDGFLYGQN TTKGGYSGPG GYNTQQQQSN TGNSFGSQRG YTQSGSTPDS
301: AVMGSGQTHF AYEELMEITQ GFAKQNILGE GGFGCVYKGK LHDGKLVAVK QLKVGSGQGD REFKAEVEII SRVHHRHLVS LVGYCISDVQ RLLIYEYVPN
401: QTLEHHLHGE GRPVLDWARR VRIAIGSAKG LAYLHEDCHP KIIHRDIKSA NILLDDEFEA QAIKTIILVA DFGLAKLSDS TQTHVSTRVM GTFGYLAPEY
501: AQSGKLTDRS DVFSFGVVLL ELITGRKPVD QYMPLGEESL VEWARPLLHK AIETGDFSDL VDRRLEKHYV ENEVFRMIET AAACVRHSGP KRPRMAQVVR
601: ALDSEGDMGD ISNGSKVGHN NAYDSCQYNS DDRKMAFGFD DSSDSGMHSG DYSVRSSRKG SNGESTEFTR SESENRNFNN QRF

Best Arabidopsis Sequence Match ( AT1G70460.1 )
(BLAST)

001: MSDSPTSSPP APSADSAPPP DTSSDGSAAP PPTDSAPPPS PPADSSPPPA LPSLPPAVFS PPPTVSSPPP PPLDSSPPPP PDLTPPPSSP PPPDAPPPIP
101: IVFPPPIDSP PPESTNSPPP PEVFEPPPPP ADEDESPPAP PPPEQLPPPA SSPQGGPKKP KKHHPGPATS PPAPSAPATS PPAPPNAPPR NSSHALPPKS
201: TAAGGPLTSP SRGVPSSGNS VPPPANSGGG YQGKTMAGFA IAGFAVIALM AVVFLVRRKK KRNIDAYSDS QYLPPSNFSI KSDGFLYGQN PTKGYSGPGG
301: YNSQQQSNSG NSFGSQRGGG GYTRSGSAPD SAVMGSGQTH FTYEELTDIT EGFSKHNILG EGGFGCVYKG KLNDGKLVAV KQLKVGSGQG DREFKAEVEI
401: ISRVHHRHLV SLVGYCIADS ERLLIYEYVP NQTLEHHLHG KGRPVLEWAR RVRIAIGSAK GLAYLHEDCH PKIIHRDIKS ANILLDDEFE AQVADFGLAK
501: LNDSTQTHVS TRVMGTFGYL APEYAQSGKL TDRSDVFSFG VVLLELITGR KPVDQYQPLG EESLVEWARP LLHKAIETGD FSELVDRRLE KHYVENEVFR
601: MIETAAACVR HSGPKRPRMV QVVRALDSEG DMGDISNGNK VGQSSAYDSG QYNNDTMKFR KMAFGFDDSS DSGMYSGDYS VQDSRKGSNG ASSEFTRNET
701: ENRNFNNRRY

Arabidopsis Description

PERK13RHS10 [Source:UniProtKB/TrEMBL;Acc:A0A178WB53]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.