CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 5
cytosol 1
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra037558.1-P	Field mustard	cytosol	42.42	99.32
CDY18547	Canola	nucleus, plastid	97.96	98.1
CDX92276	Canola	plasma membrane	61.52	87.92
AT3G18810.1	Thale cress	nucleus, plastid	84.26	82.57
CDY61983	Canola	cytosol, plastid	83.53	82.21
CDX82325	Canola	cytosol, plastid	83.38	80.22
CDX99312	Canola	nucleus, plastid	74.78	78.32
CDY48859	Canola	nucleus, plastid	69.97	70.07
CDY48084	Canola	nucleus, plastid	69.53	69.53
VIT_03s0063g02440.t01	Wine grape	plastid	42.71	69.27
GSMUA_Achr7P26790_001	Banana	plastid	39.5	62.16
CDX75434	Canola	nucleus, plastid	59.04	60.27
CDX75275	Canola	cytosol	30.47	59.38
CDX76282	Canola	nucleus, plastid	57.0	59.15
CDY46249	Canola	nucleus, plastid	57.0	58.89
GSMUA_Achr5P02090_001	Banana	nucleus	50.0	58.33
GSMUA_Achr4P10790_001	Banana	plastid	53.06	57.14
GSMUA_Achr4P32080_001	Banana	plastid	50.15	55.84
CDX69059	Canola	endoplasmic reticulum, plasma membrane	57.87	55.6
KXG39820	Sorghum	plastid	46.21	55.42
Zm00001d028337_P003	Maize	nucleus	46.79	55.06
CDY65603	Canola	plastid	49.27	54.69
Zm00001d030218_P003	Maize	plastid	44.17	54.4
GSMUA_Achr7P00830_001	Banana	plastid	48.69	54.4
EER91832	Sorghum	plastid	44.02	54.22
KRH60853	Soybean	cytosol, plastid	50.73	53.95
GSMUA_Achr4P03200_001	Banana	mitochondrion, plasma membrane	53.21	53.76
CDY71995	Canola	nucleus, plastid	32.94	52.8
HORVU0Hr1G013830.4	Barley	plastid	43.29	52.47
TraesCS5A01G411300.1	Wheat	plastid	43.44	52.01
CDY39543	Canola	plastid	49.13	51.93
CDY59546	Canola	plastid	32.94	51.83
CDX77417	Canola	plastid	48.83	51.54
CDY02546	Canola	plastid	38.34	51.27
TraesCS4A01G077500.1	Wheat	nucleus	46.21	51.05
CDY47531	Canola	plastid	38.34	50.87
HORVU2Hr1G061030.8	Barley	plastid	39.5	50.84
TraesCS4B01G233600.1	Wheat	nucleus, plastid	45.77	50.81
EER90803	Sorghum	plastid	44.31	50.41
Os10t0104800-01	Rice	plastid	41.69	50.35
Zm00001d034257_P002	Maize	plastid	42.86	50.17
Os07t0137800-00	Rice	plasma membrane	38.92	49.63
Solyc10g051330.1.1	Tomato	nucleus	42.71	48.83
PGSC0003DMT400062758	Potato	nucleus	50.58	48.46
TraesCS5B01G415000.1	Wheat	plastid	43.15	48.29
Solyc11g044460.1.1	Tomato	nucleus	50.87	47.68
PGSC0003DMT400001868	Potato	nucleus, plastid	47.38	47.65
EER97954	Sorghum	plastid	38.92	46.68
Solyc01g109530.2.1	Tomato	nucleus	47.23	46.42
CDY48706	Canola	cytosol	34.4	44.7
Zm00001d007848_P001	Maize	mitochondrion, plastid	39.21	44.24
CDY41442	Canola	plastid	39.5	41.12
CDX91719	Canola	plastid	39.21	39.91
CDY03749	Canola	plastid	38.92	39.73
CDY01653	Canola	plastid	37.17	38.81
CDY09439	Canola	plastid	38.48	38.65
CDX74517	Canola	plastid	37.17	38.4
CDY44156	Canola	nucleus	39.21	37.78
CDX68882	Canola	plastid	37.76	36.84
CDY66134	Canola	nucleus	49.27	36.74
CDY51639	Canola	nucleus	37.32	36.47
HORVU4Hr1G065270.7	Barley	cytosol	25.95	36.18
CDX93398	Canola	cytosol	37.61	36.08
CDY51224	Canola	plastid	49.71	36.05
CDY59350	Canola	plastid	34.69	35.9
CDY11592	Canola	plastid	38.34	35.78
CDY37963	Canola	cytosol	37.32	35.51
CDY20960	Canola	cytosol	37.17	35.03
CDY47133	Canola	cytosol, plastid	38.19	34.84
CDY04245	Canola	plastid	34.4	34.76
CDY20615	Canola	cytosol	36.73	34.66
CDY07370	Canola	plastid	33.53	34.53
CDX95997	Canola	plastid	33.67	31.47
CDY16146	Canola	plastid	36.59	29.99
CDY46900	Canola	plasma membrane	31.05	28.82
CDX75728	Canola	cytosol	24.49	28.0
CDY10586	Canola	cytosol, nucleus, plasma membrane	24.2	27.48
CDY02454	Canola	cytosol, nucleus, plasma membrane	24.05	27.32
CDY38610	Canola	plastid	34.84	27.13
CDX82522	Canola	cytosol	25.36	26.48
CDY20711	Canola	cytosol, plasma membrane, plastid	25.22	26.13
CDY32758	Canola	plasma membrane	25.07	25.86
CDY55134	Canola	cytosol	26.97	24.6
CDY51732	Canola	cytosol	26.82	24.47
CDY23630	Canola	cytosol	26.38	24.43
CDX97507	Canola	cytosol, mitochondrion, nucleus	26.09	23.96
CDY32884	Canola	plasma membrane	21.14	23.46
CDY32921	Canola	plasma membrane	22.59	20.67
CDY32757	Canola	plasma membrane	18.08	17.49
CDY48704	Canola	cytosol, mitochondrion, plasma membrane, plastid	9.18	16.24

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.22	Gene3D:3.30.200.20	GO:A0A078E4P3	EnsemblPlants:CDX95494	ProteinID:CDX95494
ProteinID:CDX95494.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00101294001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF07714	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF285
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
TMHMM:TMhelix	UniParc:UPI0004EDB22D	SEG:seg	:	:	:

Description

BnaC01g33860D

Coordinates

chrLK031889:+:686745..690012

Molecular Weight (calculated)

72675.3 Da

IEP (calculated)

6.202

GRAVY (calculated)

-0.802

Length

686 amino acids

Sequence
(BLAST)

001: MAEGQSPQNS PPSSTPPSPP SSDNTQQQSP PSPDSSSSSP PSSSPPATPP PDNASSPPPP DNASSPPPPS SDSQSPPSQP QGNNNNNNNN GGNNDNNNNN
101: NNGGGSNNGN NNNNGNSNNG GNNNNGNSGG GSNNNSPSPP SRNNNGGGSN NNSPSPPRSL APPRSSGGGS NSSRNDVNTG AIIGIAAGAG LLLLVMILFC
201: VCCCRKKKKK HQMPYYASSG YATGKGGGDQ YQQQYNQSGH VMNMSGQYSG SNNGNNNWMN SPPPPPPGSW QPSQPPVTGG LNSSEIYSGP HGPALPPPHP
301: SVALGFNQST FTYDELAAAT QGFSKDRLLG QGGFGYVFKG ILPNGKEIAV KSLKAGSGQG EREFQAEVEI ISRVHHRFLV SLVGYCIAGE QRMLVYEFLP
401: NDTLEFHLHG KNGTMLDWPT RLKIALGSAK GLAYLHEDCH PRIIHRDIKA SNILLDETFE AKVADFGLAK LSQDNVTHVS TRIMGTFGYL APEYASSGKL
501: TDRSDVFSFG VMLLELITGR RPVDLTGEME DSLADWARPL CLNAAQDGDY SELVDPRLEN QYEPYEMARM VACAVAAIRH SARRRPKMSQ IVRALEGDAS
601: LDDLNEGAKP GQSALFGRGS SSDYDSGSYT ADMKKFRKVA LDSQEYGASS EYGNTSEYGL DPSSSSSEET RRGGANNNKT TPNREF

Best Arabidopsis Sequence Match ( AT3G18810.1 )
(BLAST)

001: MAEGQSPENS PPSPTPPSPS SSDNQQQSSP PPSDSSSPSP PAPPPPDDSS NGSPQPPSSD SQSPPSPQGN NNNDGNNGNN NNDNNNNNNG NNNNDNNNGN
101: NKDNNNNGNN NNGNNNNGND NNGNNNNGNN NDNNNQNNGG GSNNRSPPPP SRNSDRNSPS PPRALAPPRS SGGGSNSSGN NEPNTAAIVG IVAGAGLLFL
201: VMILFCVCCC RKKKKKHQMP YYAGNGYATG KGDQYQQQQY NNQSDHVMNL SQQYPGSNGN NNWMNSPPPP PPGSWQPSPP PPPPPVSGGM NGNSSDFSSN
301: YSGPHGPSVP PPHPSVALGF NKSTFTYDEL AAATQGFSQS RLLGQGGFGY VHKGILPNGK EIAVKSLKAG SGQGEREFQA EVDIISRVHH RFLVSLVGYC
401: IAGGQRMLVY EFLPNDTLEF HLHGKSGKVL DWPTRLKIAL GSAKGLAYLH EDCHPRIIHR DIKASNILLD ESFEAKVADF GLAKLSQDNV THVSTRIMGT
501: FGYLAPEYAS SGKLTDRSDV FSFGVMLLEL VTGRRPVDLT GEMEDSLVDW ARPICLNAAQ DGDYSELVDP RLENQYEPHE MAQMVACAAA AVRHSARRRP
601: KMSQIVRALE GDATLDDLSE GGKAGQSSFL GRGSSSDYDS STYSADMKKF RKVALDSHEY GASSEYGNTS EYGLDPSSSS SEEIRRGGAN NNKTTPSRDH

Arabidopsis Description

PERK6Putative proline-rich receptor-like protein kinase PERK6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LS95]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.