CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra001723.1-P	Field mustard	cytosol, plastid	97.13	96.71
CDX82325	Canola	cytosol, plastid	97.56	95.37
CDX92276	Canola	plasma membrane	60.55	87.92
AT3G18810.1	Thale cress	nucleus, plastid	84.22	83.86
CDX95494	Canola	nucleus, plastid	82.21	83.53
CDY18547	Canola	nucleus, plastid	82.07	83.5
CDX99312	Canola	nucleus, plastid	77.04	81.98
CDY48859	Canola	nucleus, plastid	68.29	69.49
CDY48084	Canola	nucleus, plastid	67.72	68.8
VIT_03s0063g02440.t01	Wine grape	plastid	41.18	67.85
CDX75275	Canola	cytosol	30.85	61.08
GSMUA_Achr7P26790_001	Banana	plastid	38.16	61.01
CDX75434	Canola	nucleus, plastid	57.39	59.52
CDX76282	Canola	nucleus, plastid	55.52	58.55
CDY46249	Canola	nucleus, plastid	55.52	58.28
GSMUA_Achr5P02090_001	Banana	nucleus	48.78	57.82
CDX69059	Canola	endoplasmic reticulum, plasma membrane	56.24	54.9
GSMUA_Achr4P10790_001	Banana	plastid	50.07	54.79
CDY65603	Canola	plastid	48.49	54.69
Zm00001d028337_P003	Maize	nucleus	45.48	54.37
KXG39820	Sorghum	plastid	44.62	54.37
GSMUA_Achr4P32080_001	Banana	plastid	47.78	54.06
GSMUA_Achr7P00830_001	Banana	plastid	47.35	53.75
EER91832	Sorghum	plastid	42.75	53.5
KRH60853	Soybean	cytosol, plastid	49.5	53.49
HORVU0Hr1G013830.4	Barley	plastid	43.19	53.18
Zm00001d030218_P003	Maize	plastid	42.32	52.96
CDY71995	Canola	nucleus, plastid	32.28	52.57
GSMUA_Achr4P03200_001	Banana	mitochondrion, plasma membrane	51.08	52.43
TraesCS5A01G411300.1	Wheat	plastid	42.9	52.18
CDY59546	Canola	plastid	32.57	52.06
CDY02546	Canola	plastid	38.31	52.05
CDY47531	Canola	plastid	38.45	51.84
EER90803	Sorghum	plastid	44.76	51.74
HORVU2Hr1G061030.8	Barley	plastid	39.31	51.41
Zm00001d034257_P002	Maize	plastid	43.19	51.37
Os10t0104800-01	Rice	plastid	41.61	51.06
CDY39543	Canola	plastid	47.2	50.69
CDX77417	Canola	plastid	46.92	50.31
TraesCS4A01G077500.1	Wheat	nucleus	44.62	50.08
TraesCS4B01G233600.1	Wheat	nucleus, plastid	44.33	50.0
TraesCS5B01G415000.1	Wheat	plastid	42.75	48.61
Os07t0137800-00	Rice	plasma membrane	37.02	47.96
EER97954	Sorghum	plastid	39.31	47.9
Solyc10g051330.1.1	Tomato	nucleus	40.6	47.17
PGSC0003DMT400001868	Potato	nucleus, plastid	45.62	46.63
PGSC0003DMT400062758	Potato	nucleus	47.49	46.23
Solyc11g044460.1.1	Tomato	nucleus	47.63	45.36
Zm00001d007848_P001	Maize	mitochondrion, plastid	39.45	45.23
Solyc01g109530.2.1	Tomato	nucleus	45.19	45.13
CDY48706	Canola	cytosol	33.14	43.75
CDY41442	Canola	plastid	38.31	40.52
CDX91719	Canola	plastid	38.02	39.32
CDY03749	Canola	plastid	37.45	38.84
CDY09439	Canola	plastid	37.16	37.92
CDY01653	Canola	plastid	35.72	37.9
CDX68882	Canola	plastid	37.88	37.55
CDY44156	Canola	nucleus	38.16	37.36
CDX74517	Canola	plastid	35.58	37.35
CDY66134	Canola	nucleus	48.06	36.41
CDY59350	Canola	plastid	34.43	36.2
CDY51639	Canola	nucleus	36.15	35.9
CDY51224	Canola	plastid	48.49	35.73
HORVU4Hr1G065270.7	Barley	cytosol	25.11	35.57
CDX93398	Canola	cytosol	36.44	35.52
CDY04245	Canola	plastid	34.43	35.35
CDY07370	Canola	plastid	33.57	35.14
CDY11592	Canola	plastid	37.02	35.1
CDY37963	Canola	cytosol	36.01	34.81
CDY20960	Canola	cytosol	36.15	34.62
CDY47133	Canola	cytosol, plastid	37.02	34.31
CDY20615	Canola	cytosol	35.72	34.25
CDX95997	Canola	plastid	33.43	31.74
CDY16146	Canola	plastid	36.01	29.99
CDY46900	Canola	plasma membrane	30.99	29.23
CDY38610	Canola	plastid	34.43	27.24
CDX75728	Canola	cytosol	23.24	27.0
CDY10586	Canola	cytosol, nucleus, plasma membrane	23.39	26.99
CDY02454	Canola	cytosol, nucleus, plasma membrane	23.1	26.66
CDX82522	Canola	cytosol	24.1	25.57
CDY20711	Canola	cytosol, plasma membrane, plastid	23.67	24.92
CDY32758	Canola	plasma membrane	23.53	24.66
CDY55134	Canola	cytosol	25.54	23.67
CDY51732	Canola	cytosol	25.39	23.54
CDY23630	Canola	cytosol	24.96	23.48
CDX97507	Canola	cytosol, mitochondrion, nucleus	24.68	23.03
CDY32884	Canola	plasma membrane	19.8	22.33
CDY32921	Canola	plasma membrane	21.38	19.87
CDY32757	Canola	plasma membrane	17.22	16.93
CDY48704	Canola	cytosol, mitochondrion, plasma membrane, plastid	9.33	16.75

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.22	Gene3D:3.30.200.20	GO:A0A078J932	UniProt:A0A078J932	EnsemblPlants:CDY61983
ProteinID:CDY61983	ProteinID:CDY61983.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00034665001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
InterPro:Orthoreo_P10	PFAM:PF07204	PFAM:PF07714	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF285	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI0004EE3063	SEG:seg	:

Description

BnaC03g73820DBnaC03g73820D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J932]

Coordinates

chrLK034073:-:13705..16964

Molecular Weight (calculated)

74028.4 Da

IEP (calculated)

5.809

GRAVY (calculated)

-0.863

Length

697 amino acids

Sequence
(BLAST)

001: MAEGQSPENS PPSPTPPSPS SPDNTQQQSP PSPDSSSSSS PSSSPPAPPP PDNSSSSPPP PSSDSQPPPS PQQENNNNNN NNGGNNDNNN SNGNSNNDGN
101: NGGNNDGNNG GNNDGNNNNN GNNNNNGNNG NNSNNGNNGN NNNGNNNNGN NGGGSNNHSP APPSRNSDRN SPSPPRSLAP PRSSGGGDAP NTGAIIGIAA
201: GAGLLLLVMI LFCVCCCRKK KKKNQMPYYA SNGYATGKGD QYQQQHYNNQ SDHVMNLSHQ HPGSNSNNNW MNSPPPPPAQ PVSGGINNGN SSEIYSGPYG
301: PALPPPHPSV ALGFNQSTFT YEELAAATQN FSQARLLGQG GFGYVHKGIL PNGKEIAVKS LKAGSGQGER EFQAEVDIIS RVHHRFLVSL VGYCIAEGQK
401: MLLVYEFLPN DTLEFHLHGK SGNVLDWPTR LRIALGSAKG LAYLHEDCHP KIIHRDIKAS NILLDESFEA KVADFGLAKL SQDNVTHVST RIMGTFGYLA
501: PEYASSGKLT DRSDVFSFGV MLLELITGRR PVDLTGEMED SLVDWARPLC LNAAQDGDYS ELVDPRLEGQ YEPYEMARMV ACAAAAIRHS ARRRPKMSQI
601: VRALEGDASL EDLNEVKPGQ SLGRGSSSDY DSSTYSADMR KFRKVAMDSH EYGATSEYGN TSEYGLDPSS SSSEEIHTGG GSGGANKNNK TIPTREL

Best Arabidopsis Sequence Match ( AT3G18810.1 )
(BLAST)

001: MAEGQSPENS PPSPTPPSPS SSDNQQQSSP PPSDSSSPSP PAPPPPDDSS NGSPQPPSSD SQSPPSPQGN NNNDGNNGNN NNDNNNNNNG NNNNDNNNGN
101: NKDNNNNGNN NNGNNNNGND NNGNNNNGNN NDNNNQNNGG GSNNRSPPPP SRNSDRNSPS PPRALAPPRS SGGGSNSSGN NEPNTAAIVG IVAGAGLLFL
201: VMILFCVCCC RKKKKKHQMP YYAGNGYATG KGDQYQQQQY NNQSDHVMNL SQQYPGSNGN NNWMNSPPPP PPGSWQPSPP PPPPPVSGGM NGNSSDFSSN
301: YSGPHGPSVP PPHPSVALGF NKSTFTYDEL AAATQGFSQS RLLGQGGFGY VHKGILPNGK EIAVKSLKAG SGQGEREFQA EVDIISRVHH RFLVSLVGYC
401: IAGGQRMLVY EFLPNDTLEF HLHGKSGKVL DWPTRLKIAL GSAKGLAYLH EDCHPRIIHR DIKASNILLD ESFEAKVADF GLAKLSQDNV THVSTRIMGT
501: FGYLAPEYAS SGKLTDRSDV FSFGVMLLEL VTGRRPVDLT GEMEDSLVDW ARPICLNAAQ DGDYSELVDP RLENQYEPHE MAQMVACAAA AVRHSARRRP
601: KMSQIVRALE GDATLDDLSE GGKAGQSSFL GRGSSSDYDS STYSADMKKF RKVALDSHEY GASSEYGNTS EYGLDPSSSS SEEIRRGGAN NNKTTPSRDH

Arabidopsis Description

PERK6Putative proline-rich receptor-like protein kinase PERK6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LS95]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.