CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 3
plasma membrane 2
vacuole 2
extracellular 1
endoplasmic reticulum 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
EpiLoc:	plasma membrane
MultiLoc:	vacuole
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d007848_P001	Maize	mitochondrion, plastid	79.2	74.51
HORVU2Hr1G061030.8	Barley	plastid	60.31	64.73
VIT_03s0063g02440.t01	Wine grape	plastid	45.1	60.99
Bra034626.1-P	Field mustard	cytosol, nucleus, plastid	40.21	59.28
Bra037558.1-P	Field mustard	cytosol	29.55	57.68
Os07t0137800-00	Rice	plasma membrane	51.57	54.83
VIT_04s0023g01570.t01	Wine grape	nucleus	42.83	54.2
Bra022359.1-P	Field mustard	plasma membrane	44.23	52.71
CDX92276	Canola	plasma membrane	44.23	52.71
EER90803	Sorghum	plastid	52.62	49.92
EES19240	Sorghum	cytosol, plasma membrane, plastid	49.13	48.28
GSMUA_Achr7P00830_001	Banana	plastid	51.22	47.72
GSMUA_Achr5P02090_001	Banana	nucleus	48.6	47.28
KXG39820	Sorghum	plastid	46.5	46.5
EER91832	Sorghum	plastid	45.28	46.5
Bra039607.1-P	Field mustard	nucleus	48.95	45.9
CDY65603	Canola	plastid	49.13	45.47
GSMUA_Achr4P32080_001	Banana	plastid	48.6	45.13
AT2G18470.3	Thale cress	plastid	49.65	44.87
CDY71995	Canola	nucleus, plastid	32.34	43.22
KRH76796	Soybean	nucleus, plastid	47.9	43.22
OQU86081	Sorghum	plastid	46.5	42.9
CDY59546	Canola	plastid	32.52	42.66
KRH69932	Soybean	plastid	45.1	42.43
KRH28656	Soybean	nucleus, plastid	46.85	42.41
KRH08293	Soybean	nucleus	44.06	42.07
KRH60853	Soybean	cytosol, plastid	47.03	41.71
PGSC0003DMT400038554	Potato	nucleus, plastid	35.84	41.5
Solyc02g085430.2.1	Tomato	nucleus, plastid	44.06	41.31
PGSC0003DMT400040010	Potato	nucleus, plastid	44.93	39.97
CDX99312	Canola	nucleus, plastid	45.45	39.69
Solyc10g051330.1.1	Tomato	nucleus	41.61	39.67
CDY48859	Canola	nucleus, plastid	47.38	39.56
Bra018782.1-P	Field mustard	plastid	46.85	39.47
Solyc02g062790.2.1	Tomato	nucleus	45.1	39.45
CDY48084	Canola	nucleus, plastid	47.2	39.36
CDY61983	Canola	cytosol, plastid	47.9	39.31
Bra001723.1-P	Field mustard	cytosol, plastid	47.9	39.14
Bra011534.1-P	Field mustard	nucleus, plastid	45.8	38.99
CDX95494	Canola	nucleus, plastid	46.68	38.92
CDY46249	Canola	nucleus, plastid	45.1	38.86
CDX75434	Canola	nucleus, plastid	45.63	38.84
CDX76282	Canola	nucleus, plastid	44.76	38.73
AT4G34440.1	Thale cress	plastid	45.28	38.66
CDY18547	Canola	nucleus, plastid	46.15	38.54
CDX82325	Canola	cytosol, plastid	47.9	38.43
AT1G49270.1	Thale cress	cytosol, plastid	46.85	38.34
PGSC0003DMT400045839	Potato	cytosol, plastid	48.78	38.32
AT3G18810.1	Thale cress	nucleus, plastid	46.5	38.0
KXG39708	Sorghum	plastid	37.59	37.92
PGSC0003DMT400001868	Potato	nucleus, plastid	44.41	37.24
PGSC0003DMT400062758	Potato	nucleus	46.5	37.15
Solyc03g034060.2.1	Tomato	cytosol, plastid	48.08	36.96
Solyc01g109530.2.1	Tomato	nucleus	44.41	36.39
CDX69059	Canola	endoplasmic reticulum, plasma membrane	45.1	36.13
Solyc11g044460.1.1	Tomato	nucleus	45.45	35.52
KXG20993	Sorghum	plastid	37.41	35.31
KXG33373	Sorghum	plastid	41.43	33.33
KXG19971	Sorghum	plastid	40.03	32.07
KXG32101	Sorghum	plastid	38.99	31.9
KXG32962	Sorghum	plastid	38.11	31.19
Bra037220.1-P	Field mustard	nucleus	49.48	30.9
CDY66134	Canola	nucleus	49.3	30.65
CDY51224	Canola	plastid	49.83	30.13
EES01447	Sorghum	plastid	34.97	29.63
EES18801	Sorghum	cytosol	28.67	22.47
EES01025	Sorghum	plasma membrane	29.02	22.16
KXG22354	Sorghum	plastid	41.96	21.74
KXG33822	Sorghum	mitochondrion	22.2	18.57

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.22	Gene3D:3.30.200.20	EntrezGene:8086390	UniProt:C5X9E7	EnsemblPlants:EER97954
ProteinID:EER97954	ProteinID:EER97954.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166
GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF138
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	EnsemblPlantsGene:SORBI_3002G029000	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
TMHMM:TMhelix	UniParc:UPI0001A8407B	RefSeq:XP_002461433.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr2:-:2678240..2680389

Molecular Weight (calculated)

60725.5 Da

IEP (calculated)

8.097

GRAVY (calculated)

-0.430

Length

572 amino acids

Sequence
(BLAST)

001: MHPQPQATSS DDDPMPIRTT TMSSSNDDPT PSSHAARRLS TSHGGSNNKK SLFPGLGAAS SPIALAAAGA ALLLVVLVVV CCCCCCCCRR RRRKQRDAAQ
101: HQRPPPPHGG MRFYADSSGF KGNTTTGYYC PPGARPSPQW QNGQVAPAPP AAAVTPGTTT GHHGGILLPP PAPPPPLPMP ADTAAFSYEE LAQATGGFSE
201: ANLLGQGGFG YVHRGVLSDG KEVAVKQLKA GSGQGEREFQ AEVDTISRVH HRHLVALVGY CMDGARRLLV YEFVPNHTLE HHLHGKAGAG AGAGRLPVME
301: WTTRLRIAVG AAKGLAYLHE ECDPRIIHRD IKSANILLDD DFEAMVADFG LAKLTSVNHT HVSTRVMGTF GYLAPEYASS GKLTEKSDVF SYGVMLLELL
401: TGRRPGDRSS YGQDGLVDWA RQALPRALAD GNYDEIVDPR LRGDYDPTEA ARLVASAAAA VRHAARRRPK MSQIVLALQG AMPLEELNDG VRPGHGAAFG
501: SGSGSSGSAG SGSDYGGSDG SSYTAQMERI RRAAMPSPEY SADYPGSVPE YGHPSPASSD EREDRRHRGG RR

Best Arabidopsis Sequence Match ( AT2G18470.1 )
(BLAST)

001: MASSPESAPP TNSTSSPSPP SNTNSTTSSP PAPSPPSPTP PQGDSSSSPP PDSTSPPAPQ APNPPNSSNN SPSPPSQGGG GERGNGGNNG GNDTPPSRGS
101: PPSPPSRSNG DNGGSRSSPP GDTGGSRSDN PPSSGGSSGG GGGGRSNTNT AIIVGVLVGA GLLMIVLIIV CLRRKKKRKD SFYPEPMKGN QYQYYGNNNN
201: NNASQNYPNW HLNSQGQNQQ STGGWGGGGP SPPPPPRMPT SGEDSSMYSG PSRPVLPPPS PALALGFNKS TFTYQELAAA TGGFTDANLL GQGGFGYVHK
301: GVLPSGKEVA VKSLKAGSGQ GEREFQAEVD IISRVHHRYL VSLVGYCIAD GQRMLVYEFV PNKTLEYHLH GKNLPVMEFS TRLRIALGAA KGLAYLHEDC
401: HPRIIHRDIK SANILLDFNF DAMVADFGLA KLTSDNNTHV STRVMGTFGY LAPEYASSGK LTEKSDVFSY GVMLLELITG KRPVDNSITM DDTLVDWARP
501: LMARALEDGN FNELADARLE GNYNPQEMAR MVTCAAASIR HSGRKRPKMS QIVRALEGEV SLDALNEGVK PGHSNVYGSL GASSDYSQTS YNADMKKFRQ
601: IALSSQEFPV SDCEGTSSND SRDMGTKSPT PPK

Arabidopsis Description

PERK4Proline-rich receptor-like protein kinase PERK4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZNQ8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.