CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER91265
OQU91413

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G38560.1	EER91265	AT4G26630.1	25387881
AT5G38560.1	OQU91413	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d035774_P001	Maize	plastid	89.27	90.92
Os05t0100700-02	Rice	plasma membrane	37.29	85.93
TraesCS1B01G001500.1	Wheat	plastid	47.69	80.5
Solyc02g089750.2.1	Tomato	cytosol	21.29	73.71
VIT_14s0083g00330.t01	Wine grape	plasma membrane	47.19	65.6
Bra004022.1-P	Field mustard	plastid	39.11	60.93
TraesCS1D01G004300.1	Wheat	plastid	65.84	60.82
HORVU1Hr1G000090.3	Barley	plastid	63.37	58.18
KXG32101	Sorghum	plastid	65.51	56.8
KRH07595	Soybean	plastid	43.56	49.62
CDY01653	Canola	plastid	52.81	48.71
GSMUA_Achr2P14510_001	Banana	plastid	52.81	48.71
Bra028192.1-P	Field mustard	plastid	53.14	48.13
CDX74517	Canola	plastid	52.64	48.04
GSMUA_Achr4P24400_001	Banana	plastid	51.65	47.35
GSMUA_Achr2P09600_001	Banana	plastid	51.16	47.18
AT5G38560.1	Thale cress	plastid	51.32	45.67
PGSC0003DMT400026193	Potato	plastid	50.33	44.72
VIT_01s0011g02460.t01	Wine grape	plastid	53.3	44.49
GSMUA_Achr10P...	Banana	plastid	52.31	44.21
KRH45181	Soybean	plastid	52.81	44.2
EES01447	Sorghum	plastid	48.68	43.7
KRH01485	Soybean	plastid	54.46	43.65
KXG19971	Sorghum	plastid	51.32	43.56
KRH75567	Soybean	plastid	50.66	43.12
CDY04245	Canola	plastid	48.18	43.0
CDY59350	Canola	plastid	47.03	42.99
CDY07370	Canola	plastid	47.19	42.94
KRH71097	Soybean	plastid	51.82	42.43
AT1G68690.2	Thale cress	plastid	48.68	41.67
PGSC0003DMT400064597	Potato	plastid	50.66	41.21
KXG39820	Sorghum	plastid	38.61	40.91
PGSC0003DMT400019290	Potato	mitochondrion	46.86	40.8
Solyc01g010030.2.1	Tomato	plastid	48.68	40.41
Solyc05g010140.2.1	Tomato	plastid	50.0	40.4
AT1G26150.1	Thale cress	plastid	50.49	40.16
PGSC0003DMT400041343	Potato	plastid	48.84	40.05
CDX95997	Canola	plastid	47.85	39.51
EER91832	Sorghum	plastid	35.97	39.14
EES19240	Sorghum	cytosol, plasma membrane, plastid	37.29	38.83
OQU86081	Sorghum	plastid	38.94	38.06
KXG32962	Sorghum	plastid	43.89	38.05
EER90803	Sorghum	plastid	37.79	37.98
KXG39708	Sorghum	plastid	35.31	37.74
EER97954	Sorghum	plastid	35.31	37.41
CDY16146	Canola	plastid	49.51	35.84
Solyc04g006930.2.1	Tomato	plastid	47.19	35.75
Bra024725.1-P	Field mustard	plastid	46.2	34.19
Bra004331.1-P	Field mustard	plastid	48.35	33.83
CDY38610	Canola	plastid	48.35	33.26
KXG33373	Sorghum	plastid	38.94	33.19
EES18801	Sorghum	cytosol	28.71	23.84
EES01025	Sorghum	plasma membrane	29.37	23.77
KXG22354	Sorghum	plastid	41.09	22.55
KXG33822	Sorghum	mitochondrion	23.27	20.61

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.22	Gene3D:3.30.200.20	UniProt:A0A1B6P5R6	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	EnsemblPlants:KXG20993	ProteinID:KXG20993
ProteinID:KXG20993.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF478	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	EnsemblPlantsGene:SORBI_3009G000300
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI00081ADDE2	SEG:seg	:

Description

hypothetical protein

Coordinates

chr9:-:54111..58498

Molecular Weight (calculated)

64408.3 Da

IEP (calculated)

9.654

GRAVY (calculated)

-0.300

Length

606 amino acids

Sequence
(BLAST)

001: MASAPTTAGA RAASSPSPAS SRPTATPADT AATPPAAPPP LTSPPPAAPP PSSHLQPPGP PRHTAPPPPR PPLLSPPPTS PTPSAAPTPS LSPPASPAPA
101: SNAPPPSAPP PTRHRPLPTP AIAVDPTHSG AGKNPSSNKS SSSSPGAPSR NPSAPFGSLG TGVVIAIAAG VVALLLLSLL VTAVWFNNKR KRKQTNGYRA
201: GFMSPTSPFS SQQPSGESAN VGSSVDPSVQ TKYSAGSPRL KQCLSDISMG NSRFFSYDEL YQITDGFSAQ RLLGEGGFGS VYKGRLPDGK DVAIKRLKDG
301: GGQGEREFQA EVDIISRVHH RHLVSLVGYC IFNDQRLLVY DFVPNNTLHY HLHGHGMPVL EWSMRVKIAA GAARGIAYLH EDCHLRIIHR DIKSSNILLD
401: NNFEAKVADF GLARLALDAV THVTTRVMGT FGYMAPEYAS SGKLTDRSDV FSFGVVLLEL ITGRKPVDAS RPLGDESLVE WARPLLSRAL DTGDLGGLVD
501: PRLEMKWLNE VEMFRMIEAA AACIRHSASR RPRMSQVVRV LESSAEIDLT NGVQPGRSQL FNVANTAEIR MFRRMVAGAQ DDDSSDLTQY DWSRGSDAAP
601: SSRIAF

Best Arabidopsis Sequence Match ( AT1G26150.1 )
(BLAST)

001: MTTPAQAPRE EVSLSPSLAS PPLMALPPPQ PSFPGDNATS PTREPTNGNP PETTNTPAQS SPPPETPLSS PPPEPSPPSP SLTGPPPTTI PVSPPPEPSP
101: PPPLPTEAPP PANPVSSPPP ESSPPPPPPT EAPPTTPITS PSPPTNPPPP PESPPSLPAP DPPSNPLPPP KLVPPSHSPP RHLPSPPASE IPPPPRHLPS
201: PPASERPSTP PSDSEHPSPP PPGHPKRREQ PPPPGSKRPT PSPPSPSDSK RPVHPSPPSP PEETLPPPKP SPDPLPSNSS SPPTLLPPSS VVSPPSPPRK
301: SVSGPDNPSP NNPTPVTDNS SSSGISIAAV VGVSIGVALV LLTLIGVVVC CLKKRKKRLS TIGGGYVMPT PMESSSPRSD SALLKTQSSA PLVGNRSSNR
401: TYLSQSEPGG FGQSRELFSY EELVIATNGF SDENLLGEGG FGRVYKGVLP DERVVAVKQL KIGGGQGDRE FKAEVDTISR VHHRNLLSMV GYCISENRRL
501: LIYDYVPNNN LYFHLHAAGT PGLDWATRVK IAAGAARGLA YLHEDCHPRI IHRDIKSSNI LLENNFHALV SDFGLAKLAL DCNTHITTRV MGTFGYMAPE
601: YASSGKLTEK SDVFSFGVVL LELITGRKPV DASQPLGDES LVEWARPLLS NATETEEFTA LADPKLGRNY VGVEMFRMIE AAAACIRHSA TKRPRMSQIV
701: RAFDSLAEED LTNGMRLGES EIINSAQQSA EIRLFRRMAF GSQNYSTDSL TRNSYISKDE NL

Arabidopsis Description

PERK10Proline-rich receptor-like protein kinase PERK10 [Source:UniProtKB/Swiss-Prot;Acc:Q9C660]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.