Factsheet for Solyc02g089750.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plasma membrane 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc07g065490.2.1
Solyc10g006000.2.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G38560.1	Solyc07g065490.2.1	AT4G26630.1	25387881
AT5G38560.1	Solyc10g006000.2.1	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_14s0083g00330.t01	Wine grape	plasma membrane	82.86	33.26
TraesCS3D01G005400.1	Wheat	cytosol	75.43	32.92
GSMUA_Achr8P29720_001	Banana	mitochondrion	74.86	32.83
Os05t0100700-02	Rice	plasma membrane	48.57	32.32
TraesCS1B01G001500.1	Wheat	plastid	62.29	30.36
GSMUA_Achr1P25240_001	Banana	mitochondrion	76.0	27.77
Solyc08g068250.2.1	Tomato	cytosol	64.0	26.54
PGSC0003DMT400026193	Potato	plastid	94.29	24.19
Zm00001d035774_P001	Maize	plastid	74.86	22.02
GSMUA_Achr2P09600_001	Banana	plastid	81.14	21.61
KXG20993	Sorghum	plastid	73.71	21.29
GSMUA_Achr2P14510_001	Banana	plastid	79.43	21.16
Solyc03g120760.2.1	Tomato	plasma membrane, plastid	69.71	21.0
CDY01653	Canola	plastid	77.14	20.55
Solyc02g085430.2.1	Tomato	nucleus, plastid	71.43	20.49
Bra028192.1-P	Field mustard	plastid	78.29	20.48
CDX74517	Canola	plastid	76.57	20.18
AT5G38560.1	Thale cress	plastid	77.71	19.97
GSMUA_Achr4P24400_001	Banana	plastid	75.43	19.97
TraesCS1D01G004300.1	Wheat	plastid	74.86	19.97
HORVU3Hr1G070200.1	Barley	plastid	76.57	19.85
TraesCS3A01G278100.1	Wheat	plastid	76.57	19.85
HORVU1Hr1G000090.3	Barley	plastid	74.86	19.85
TraesCS3D01G278400.1	Wheat	cytosol, plastid	76.57	19.82
TraesCS3B01G312300.1	Wheat	plastid	76.0	19.65
HORVU3Hr1G000770.2	Barley	plastid	76.57	19.56
Solyc10g051330.1.1	Tomato	nucleus	66.86	19.5
Os01t0110500-01	Rice	plasma membrane	77.71	19.48
Zm00001d012774_P001	Maize	cytosol, plastid	74.29	19.46
EES01447	Sorghum	plastid	74.86	19.41
TraesCS3B01G008600.2	Wheat	plastid	76.0	19.39
Os01t0738300-01	Rice	cytosol	74.29	19.37
TraesCS3A01G003900.1	Wheat	plastid	76.0	19.36
KRH45181	Soybean	plastid	80.0	19.34
Zm00001d043562_P008	Maize	cytosol	74.86	19.12
Solyc02g062790.2.1	Tomato	nucleus	71.43	19.11
GSMUA_Achr10P...	Banana	plastid	77.14	18.83
KXG32101	Sorghum	plastid	74.86	18.74
Zm00001d040127_P001	Maize	plasma membrane	73.71	18.67
KRH01485	Soybean	plastid	80.57	18.65
Zm00001d008433_P007	Maize	plastid	74.86	17.95
Solyc12g007110.1.1	Tomato	nucleus	69.71	17.81
Solyc01g109530.2.1	Tomato	nucleus	69.14	17.34
Solyc05g010140.2.1	Tomato	plastid	74.29	17.33
Solyc01g010030.2.1	Tomato	plastid	72.0	17.26
Solyc03g034060.2.1	Tomato	cytosol, plastid	72.57	17.07
Solyc11g044460.1.1	Tomato	nucleus	68.57	16.39
Solyc04g006930.2.1	Tomato	plastid	72.57	15.88
Solyc07g027020.2.1	Tomato	cytosol, mitochondrion, plasma membrane, plastid	48.57	13.12
Solyc01g096690.1.1	Tomato	cytosol, nucleus, plasma membrane	45.14	11.95
Solyc03g121440.2.1	Tomato	cytosol	49.71	11.9
Solyc12g044840.1.1	Tomato	cytosol	49.71	11.74
Solyc04g079690.2.1	Tomato	plasma membrane	47.43	11.56
Solyc04g063370.1.1	Tomato	cytosol	38.86	11.22
GSMUA_Achr8P13750_001	Banana	cytosol, nucleus, plastid	54.29	10.83

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719	UniProt:K4BCC6
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF132
InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc02g089750.2	EnsemblPlants:Solyc02g089750.2.1
UniParc:UPI0002768C66	:	:	:	:	:

Description

No Description!

Coordinates

chr2:+:51472094..51474083

Molecular Weight (calculated)

19348.2 Da

IEP (calculated)

7.069

GRAVY (calculated)

-0.161

Length

175 amino acids

Sequence
(BLAST)

001: MGVLEIQDHG GFGCVYKGVL NDGREVAVKQ LKSGSGQGER EFRAEVEIIS RVHHRHLVSL VGYCISEQQR LLVYDYVPND TLDYHLHGKG MPTMDWATRV
101: KVAAGAARGL AYLHEDCHPR IIHRDIKTSN ILLDINFEAQ VADFGLARLA GDASSTHVTT RVMGTFGGES KLTFI

Best Arabidopsis Sequence Match ( AT1G23540.2 )
(BLAST)

001: MSDLGESPSS SPPAPPADTA PPPETPSENS ALPPVDSSPP SPPADSSSTP PLSEPSTPPP DSQLPPLPSI LPPLTDSPPP PSDSSPPVDS TPSPPPPTSN
101: ESPSPPEDSE TPPAPPNESN DNNPPPSQDL QSPPPSSPSP NVGPTNPESP PLQSPPAPPA SDPTNSPPAS PLDPTNPPPI QPSGPATSPP ANPNAPPSPF
201: PTVPPKTPSS GPVVSPSLTS PSKGTPTPNQ GNGDGGGGGG GYQGKTMVGM AVAGFAIMAL IGVVFLVRRK KKRNIDSYNH SQYLPHPNFS VKSDGFLYGQ
301: DPGKGYSSGP NGSMYNNSQQ QQSSMGNSYG TAGGGYPHHQ MQSSGTPDSA ILGSGQTHFS YEELAEITQG FARKNILGEG GFGCVYKGTL QDGKVVAVKQ
401: LKAGSGQGDR EFKAEVEIIS RVHHRHLVSL VGYCISDQHR LLIYEYVSNQ TLEHHLHGKG LPVLEWSKRV RIAIGSAKGL AYLHEDCHPK IIHRDIKSAN
501: ILLDDEYEAQ VADFGLARLN DTTQTHVSTR VMGTFG

Arabidopsis Description

PERK12Proline-rich receptor-like protein kinase PERK12 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUE0]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.