Factsheet for TraesCS1D01G004300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS4A01G137900.1
TraesCS4B01G148100.1
TraesCS4D01G153300.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G38560.1	TraesCS4A01G137900.1	AT4G26630.1	25387881
AT5G38560.1	TraesCS4B01G148100.1	AT4G26630.1	25387881
AT5G38560.1	TraesCS4D01G153300.1	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G001500.1	Wheat	plastid	53.96	98.61
Os05t0100700-02	Rice	plasma membrane	35.21	87.83
HORVU1Hr1G000090.3	Barley	plastid	87.96	87.42
Solyc02g089750.2.1	Tomato	cytosol	19.97	74.86
TraesCS3D01G005400.1	Wheat	cytosol	44.97	73.57
Zm00001d035774_P001	Maize	plastid	61.89	68.24
KXG20993	Sorghum	plastid	60.82	65.84
VIT_14s0083g00330.t01	Wine grape	plasma membrane	43.14	64.91
Bra004022.1-P	Field mustard	plastid	35.98	60.67
GSMUA_Achr2P14510_001	Banana	plastid	51.07	50.99
KRH07595	Soybean	plastid	41.31	50.94
GSMUA_Achr2P09600_001	Banana	plastid	49.24	49.16
GSMUA_Achr4P24400_001	Banana	plastid	48.32	47.96
CDY01653	Canola	plastid	47.26	47.18
CDX74517	Canola	plastid	47.56	46.99
Bra028192.1-P	Field mustard	plastid	47.87	46.94
PGSC0003DMT400026193	Potato	plastid	48.32	46.48
GSMUA_Achr10P...	Banana	plastid	50.15	45.89
VIT_01s0011g02460.t01	Wine grape	plastid	50.61	45.73
AT5G38560.1	Thale cress	plastid	47.26	45.52
KRH45181	Soybean	plastid	49.39	44.75
TraesCS3D01G278400.1	Wheat	cytosol, plastid	46.04	44.67
KRH01485	Soybean	plastid	51.07	44.31
TraesCS1D01G339600.1	Wheat	plastid	30.18	43.9
TraesCS3D01G290100.1	Wheat	cytosol	29.12	43.61
CDY04245	Canola	plastid	44.66	43.15
CDY59350	Canola	plastid	43.6	43.14
CDY07370	Canola	plastid	43.29	42.64
KRH71097	Soybean	plastid	48.02	42.57
Solyc01g010030.2.1	Tomato	plastid	47.26	42.47
KRH75567	Soybean	plastid	45.88	42.28
AT1G68690.2	Thale cress	plastid	45.43	42.09
PGSC0003DMT400041343	Potato	plastid	47.26	41.95
Solyc05g010140.2.1	Tomato	plastid	47.87	41.87
PGSC0003DMT400064597	Potato	plastid	47.26	41.61
PGSC0003DMT400019290	Potato	mitochondrion	43.45	40.95
AT1G26150.1	Thale cress	plastid	47.1	40.55
TraesCS1D01G126300.1	Wheat	plastid	40.09	40.28
TraesCS3D01G160000.1	Wheat	plastid	37.96	39.4
CDX95997	Canola	plastid	43.9	39.24
CDY16146	Canola	plastid	46.04	36.08
TraesCS7D01G232700.1	Wheat	nucleus, plastid	40.24	35.15
Solyc04g006930.2.1	Tomato	plastid	42.53	34.88
Bra024725.1-P	Field mustard	plastid	42.38	33.94
Bra004331.1-P	Field mustard	plastid	44.51	33.72
CDY38610	Canola	plastid	44.66	33.26
TraesCS3D01G217700.1	Wheat	cytosol, nucleus, peroxisome	28.66	24.87
TraesCS1D01G442500.1	Wheat	plastid	29.27	21.65
TraesCS3D01G402800.1	Wheat	mitochondrion	21.04	20.03

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.22	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF07714	PRINTS:PR01217	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF489	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS1D01G004300	EnsemblPlants:TraesCS1D01G004300.1	TIGR:cd14066
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1D:+:2109067..2112929

Molecular Weight (calculated)

68937.2 Da

IEP (calculated)

10.065

GRAVY (calculated)

-0.394

Length

656 amino acids

Sequence
(BLAST)

001: MAAKAPAPSA RSRALASASA PAPASSRRPN ATPAADTAAP STSATTSPPP SSPPSAPPPK LAASPPPASP PPTPPAALPT PKPAPSTSTP PPTTTSPPAP
101: PPKRSPAAAP PPTAPAPRPT PPAPAPRTAP TSQSPAASPP AHAAPHAKPS PPPAAGHHPQ LPTPATAVDP ANQHGRSPNK SSTQSAGERG RKASPSPGSS
201: NGGASNGVVI AVGAVLAFLV VTLIAAAVLY TKKRRRGRDD YRAGFRSPPY SSELPPSVPS GGGSANAAMS SSADPSVHTN YSAGSPRLKA CVSDMSVGNS
301: RFFTYQEMYQ ITDGFSPRNL LGEGGFGSVY KGRLPEGKDV AVKQLRDGSG QGEREFQAEV EIISRVHHRH LVSLVGYCIA NSQRLLVYDF VSNDTLHYHL
401: HGQGRPVLEW SARVKIAAGA ARGIAYLHED CHPRIIHRDI KSSNILLDNN FDALVADFGL ARLALDAVTH VTTRVMGTFG YMAPEYASSG KLTEKSDVFS
501: FGVVLLELMT GRKPVDSSRP LGDESLVEWA RPLLSRALET GKLEGLVDPR LEKNFNEVEM FRMIESAAAC IRHSSSKRPR MSQVVRVLDS LADIDLTNGV
601: QPGQSELFNV ANTADIRMFQ QMVQGNQDDS SAFSQYSWIS RSRADAEATS SNSRIL

Best Arabidopsis Sequence Match ( AT1G26150.1 )
(BLAST)

001: MTTPAQAPRE EVSLSPSLAS PPLMALPPPQ PSFPGDNATS PTREPTNGNP PETTNTPAQS SPPPETPLSS PPPEPSPPSP SLTGPPPTTI PVSPPPEPSP
101: PPPLPTEAPP PANPVSSPPP ESSPPPPPPT EAPPTTPITS PSPPTNPPPP PESPPSLPAP DPPSNPLPPP KLVPPSHSPP RHLPSPPASE IPPPPRHLPS
201: PPASERPSTP PSDSEHPSPP PPGHPKRREQ PPPPGSKRPT PSPPSPSDSK RPVHPSPPSP PEETLPPPKP SPDPLPSNSS SPPTLLPPSS VVSPPSPPRK
301: SVSGPDNPSP NNPTPVTDNS SSSGISIAAV VGVSIGVALV LLTLIGVVVC CLKKRKKRLS TIGGGYVMPT PMESSSPRSD SALLKTQSSA PLVGNRSSNR
401: TYLSQSEPGG FGQSRELFSY EELVIATNGF SDENLLGEGG FGRVYKGVLP DERVVAVKQL KIGGGQGDRE FKAEVDTISR VHHRNLLSMV GYCISENRRL
501: LIYDYVPNNN LYFHLHAAGT PGLDWATRVK IAAGAARGLA YLHEDCHPRI IHRDIKSSNI LLENNFHALV SDFGLAKLAL DCNTHITTRV MGTFGYMAPE
601: YASSGKLTEK SDVFSFGVVL LELITGRKPV DASQPLGDES LVEWARPLLS NATETEEFTA LADPKLGRNY VGVEMFRMIE AAAACIRHSA TKRPRMSQIV
701: RAFDSLAEED LTNGMRLGES EIINSAQQSA EIRLFRRMAF GSQNYSTDSL TRNSYISKDE NL

Arabidopsis Description

PERK10Proline-rich receptor-like protein kinase PERK10 [Source:UniProtKB/Swiss-Prot;Acc:Q9C660]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.