Factsheet for GSMUA_Achr2P14510_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr9P09250_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G38560.1	GSMUA_Achr9P09250_001	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g089750.2.1	Tomato	cytosol	21.16	79.43
Os05t0100700-02	Rice	plasma membrane	31.05	77.57
GSMUA_Achr2P09600_001	Banana	plastid	68.8	68.8
TraesCS1B01G001500.1	Wheat	plastid	37.14	67.97
VIT_14s0083g00330.t01	Wine grape	plasma membrane	45.05	67.89
GSMUA_Achr8P29720_001	Banana	mitochondrion	40.18	66.17
GSMUA_Achr4P24400_001	Banana	plastid	65.3	64.9
TraesCS3D01G005400.1	Wheat	cytosol	38.97	63.84
Bra004022.1-P	Field mustard	plastid	37.75	63.75
GSMUA_Achr10P...	Banana	plastid	68.19	62.48
GSMUA_Achr1P25240_001	Banana	mitochondrion	41.4	56.78
KRH07595	Soybean	plastid	44.6	55.08
Zm00001d035774_P001	Maize	plastid	48.71	53.78
KXG20993	Sorghum	plastid	48.71	52.81
PGSC0003DMT400026193	Potato	plastid	54.64	52.64
Zm00001d040127_P001	Maize	plasma membrane	54.49	51.81
KXG32101	Sorghum	plastid	55.1	51.79
GSMUA_Achr5P06880_001	Banana	plastid	32.42	51.45
VIT_01s0011g02460.t01	Wine grape	plastid	56.62	51.24
TraesCS1D01G004300.1	Wheat	plastid	50.99	51.07
GSMUA_Achr8P19800_001	Banana	cytosol	31.96	50.97
GSMUA_Achr7P26790_001	Banana	plastid	33.49	50.46
HORVU1Hr1G000090.3	Barley	plastid	50.68	50.45
Bra028192.1-P	Field mustard	plastid	50.68	49.78
Os01t0110500-01	Rice	plasma membrane	52.66	49.57
CDX74517	Canola	plastid	50.08	49.55
TraesCS3A01G003900.1	Wheat	plastid	51.75	49.49
CDY01653	Canola	plastid	49.47	49.47
KRH45181	Soybean	plastid	54.49	49.45
TraesCS3B01G008600.2	Wheat	plastid	51.6	49.42
HORVU3Hr1G000770.2	Barley	plastid	51.29	49.2
CDY04245	Canola	plastid	50.68	49.04
Zm00001d008433_P007	Maize	plastid	54.49	49.04
GSMUA_Achr10P...	Banana	plastid	36.53	48.98
GSMUA_Achr7P14360_001	Banana	plastid	40.18	48.71
CDY07370	Canola	plastid	49.16	48.5
KRH01485	Soybean	plastid	55.71	48.41
KRH75567	Soybean	plastid	52.36	48.31
AT5G38560.1	Thale cress	plastid	50.08	48.31
KRH71097	Soybean	plastid	53.42	47.43
AT1G68690.2	Thale cress	plastid	50.84	47.18
PGSC0003DMT400064597	Potato	plastid	53.12	46.85
CDY59350	Canola	plastid	46.88	46.46
PGSC0003DMT400019290	Potato	mitochondrion	49.16	46.41
Solyc05g010140.2.1	Tomato	plastid	52.97	46.4
Solyc01g010030.2.1	Tomato	plastid	50.99	45.89
PGSC0003DMT400041343	Potato	plastid	51.29	45.6
GSMUA_Achr6P27340_001	Banana	cytosol, endoplasmic reticulum, plastid	35.62	44.83
CDX95997	Canola	plastid	49.62	44.41
GSMUA_Achr5P02090_001	Banana	nucleus	38.51	43.03
AT1G26150.1	Thale cress	plastid	49.77	42.91
GSMUA_Achr1P13940_001	Banana	plastid	45.66	42.49
GSMUA_Achr10P...	Banana	plastid	34.7	41.45
GSMUA_Achr7P00830_001	Banana	plastid	38.36	41.04
GSMUA_Achr4P10790_001	Banana	plastid	39.27	40.5
GSMUA_Achr4P32080_001	Banana	plastid	37.6	40.1
CDY16146	Canola	plastid	50.99	40.02
GSMUA_Achr4P03200_001	Banana	mitochondrion, plasma membrane	41.25	39.91
Solyc04g006930.2.1	Tomato	plastid	48.25	39.62
Bra024725.1-P	Field mustard	plastid	47.95	38.46
GSMUA_Achr10P...	Banana	cytosol	35.01	38.33
Bra004331.1-P	Field mustard	plastid	50.08	37.99
CDY38610	Canola	plastid	50.53	37.68
GSMUA_Achr7P14350_001	Banana	plasma membrane	26.03	37.67
GSMUA_Achr7P14330_001	Banana	plasma membrane	24.96	37.53
GSMUA_Achr3P15710_001	Banana	plastid	39.57	35.62
GSMUA_Achr8P13750_001	Banana	cytosol, nucleus, plastid	45.51	34.09
GSMUA_Achr1P04890_001	Banana	cytosol	28.46	26.38
GSMUA_Achr6P26510_001	Banana	cytosol	27.85	25.56
GSMUA_Achr9P05910_001	Banana	plasma membrane	28.16	25.1
GSMUA_Achr6P18630_001	Banana	cytosol, nucleus, plasma membrane	20.09	24.58
GSMUA_Achr8P04820_001	Banana	cytosol, plasma membrane, plastid	25.27	21.99
GSMUA_Achr5P07770_001	Banana	cytosol	23.59	20.61

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.22	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr2G14510_001	EnsemblPlants:GSMUA_Achr2P14510_001	EnsemblPlants:GSMUA_Achr2T14510_001	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	UniProt:M0S7Z2	PFAM:PF07714	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF132	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI000295FDC0	SEG:seg	:

Description

retrotransposon protein, putative, unclassified, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr2G14510_001]

Coordinates

chr2:+:16257964..16261479

Molecular Weight (calculated)

69041.5 Da

IEP (calculated)

7.763

GRAVY (calculated)

-0.304

Length

657 amino acids

Sequence
(BLAST)

001: MSSSPPPSPS ATPPSSSASP PPPVSSAPPP STFSPPPPIA SSPPPVTSPS PPVPSSSPPP SASPPPPVLS PPPTSIAAPP PPSLPSPPPS SGSPTPPASP
101: SPPSGSPPPV PSAKPPKSAP SPPSPPSASP SPPSKPPPKH ASPPTTSPPS NSSGGTTPNQ PGLSPPLPSS IAPPGISATP VTPVSHSRPG PGSDSGQGGG
201: GLNTASVVAI GAVAAFVMLC IAGLVVFIMR KRRKPVTGYN AGFVMPSPFT SSIMSGNSQY ALTPYGNFSN LTSFYLSDSS FPRSPSAPLV HHKKSGSIGR
301: MNSLPDITIS SSTVWFSYEE LYEITHGFSP LDILGEGGFG SVYKGSLPDG REVAVKRLKV DSGQGEREFK AEVEIISRVH HRHLVSLVGY CIFEQQRLLV
401: YDYVPNGTLE SHLHGKGRPV MDWTTRVKVA AGAARGIAYL HEDCHPRIIH RDIKSSNILL DNNFEAQVSD FGLARLAVDA CTHVTTRVMG TFGYLAPEYA
501: SSGKLTEKSD VFSFGVVLLE LITGRKPVDS TRPLGDESLV EWARPLLSRA LETGELGELH DPRLEKNYDE TEMFRMIEAA AACTRHSAAM RPQMGKVVRV
601: LDSLADIDLN NGVTPGQSEV FNVAHSADIR IFQHLAFGSH DSSSDYSPYN WSRQRDV

Best Arabidopsis Sequence Match ( AT5G38560.1 )
(BLAST)

001: MSLVPPLPIL SPPSSNSSTT APPPLQTQPT TPSAPPPVTP PPSPPQSPPP VVSSSPPPPV VSSPPPSSSP PPSPPVITSP PPTVASSPPP PVVIASPPPS
101: TPATTPPAPP QTVSPPPPPD ASPSPPAPTT TNPPPKPSPS PPGETPSPPG ETPSPPKPSP STPTPTTTTS PPPPPATSAS PPSSNPTDPS TLAPPPTPLP
201: VVPREKPIAK PTGPASNNGN NTLPSSSPGK SEVGTGGIVA IGVIVGLVFL SLFVMGVWFT RKRKRKDPGT FVGYTMPPSA YSSPQGSDVV LFNSRSSAPP
301: KMRSHSGSDY MYASSDSGMV SNQRSWFSYD ELSQVTSGFS EKNLLGEGGF GCVYKGVLSD GREVAVKQLK IGGSQGEREF KAEVEIISRV HHRHLVTLVG
401: YCISEQHRLL VYDYVPNNTL HYHLHAPGRP VMTWETRVRV AAGAARGIAY LHEDCHPRII HRDIKSSNIL LDNSFEALVA DFGLAKIAQE LDLNTHVSTR
501: VMGTFGYMAP EYATSGKLSE KADVYSYGVI LLELITGRKP VDTSQPLGDE SLVEWARPLL GQAIENEEFD ELVDPRLGKN FIPGEMFRMV EAAAACVRHS
601: AAKRPKMSQV VRALDTLEEA TDITNGMRPG QSQVFDSRQQ SAQIRMFQRM AFGSQDYSSD FFDRSQSHSS WGSRDQSRFV P

Arabidopsis Description

PERK8Proline-rich receptor-like protein kinase PERK8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFW5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.