Factsheet for GSMUA_Achr5P06880_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plasma membrane 1
plastid 4
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P19800_001	Banana	cytosol	75.12	75.49
GSMUA_Achr10P...	Banana	plastid	84.54	71.43
GSMUA_Achr7P26790_001	Banana	plastid	64.73	61.47
GSMUA_Achr7P14360_001	Banana	plastid	78.02	59.59
EES19240	Sorghum	cytosol, plasma membrane, plastid	83.57	59.45
HORVU1Hr1G030140.2	Barley	plastid	83.33	56.65
GSMUA_Achr10P...	Banana	cytosol	81.4	56.17
Zm00001d037811_P001	Maize	plasma membrane	66.91	55.96
Bra038894.1-P	Field mustard	cytosol	21.26	53.01
TraesCS1D01G126300.1	Wheat	plastid	83.09	52.68
GSMUA_Achr8P29720_001	Banana	mitochondrion	50.48	52.38
TraesCS1A01G127900.1	Wheat	plastid	83.09	52.28
Os01t0227200-01	Rice	plasma membrane	74.64	51.76
AT1G52290.1	Thale cress	plastid	63.28	51.47
VIT_11s0016g03880.t01	Wine grape	plastid	80.68	51.38
CDY02546	Canola	plastid	63.28	51.07
TraesCS1B01G147000.2	Wheat	plastid	76.09	51.05
Os05t0218400-01	Rice	plasma membrane	82.85	50.81
CDY47531	Canola	plastid	63.28	50.68
OQU86081	Sorghum	plastid	75.6	50.48
Bra014321.1-P	Field mustard	plastid	63.04	50.48
VIT_09s0002g04210.t01	Wine grape	plastid	66.67	50.09
Zm00001d010421_P002	Maize	plasma membrane	81.88	49.93
Zm00001d039311_P001	Maize	mitochondrion	74.4	49.68
KRH47030	Soybean	nucleus, plastid	68.36	49.65
KRH48383	Soybean	mitochondrion	79.95	49.33
TraesCS3B01G179300.1	Wheat	plastid	75.12	49.29
HORVU3Hr1G030900.1	Barley	plastid	74.88	49.28
TraesCS3D01G160000.1	Wheat	plastid	75.12	49.21
TraesCS3A01G152200.1	Wheat	plastid	74.88	49.21
KRH39292	Soybean	plastid	78.5	48.95
Bra021251.1-P	Field mustard	cytosol	13.04	48.65
Bra015053.1-P	Field mustard	plastid	75.12	48.29
AT3G24540.1	Thale cress	cytosol	55.8	48.23
CDY39543	Canola	plastid	75.12	47.92
CDX77417	Canola	plastid	75.12	47.85
AT3G24550.1	Thale cress	plastid	74.4	47.24
GSMUA_Achr5P02090_001	Banana	nucleus	65.94	46.43
Solyc12g007110.1.1	Tomato	nucleus	76.09	45.99
PGSC0003DMT400001024	Potato	plastid	76.57	45.48
GSMUA_Achr7P00830_001	Banana	plastid	67.15	45.28
Solyc03g120760.2.1	Tomato	plasma membrane, plastid	63.04	44.92
PGSC0003DMT400006515	Potato	plastid	63.77	44.9
GSMUA_Achr7P14330_001	Banana	plasma membrane	47.1	44.62
GSMUA_Achr4P10790_001	Banana	plastid	68.6	44.58
GSMUA_Achr1P25240_001	Banana	mitochondrion	51.21	44.26
GSMUA_Achr10P...	Banana	plastid	58.21	43.82
CDY48706	Canola	cytosol	55.8	43.75
GSMUA_Achr4P32080_001	Banana	plastid	64.73	43.51
GSMUA_Achr7P14350_001	Banana	plasma membrane	47.58	43.39
Bra028371.1-P	Field mustard	plastid	67.15	42.12
GSMUA_Achr4P03200_001	Banana	mitochondrion, plasma membrane	67.15	40.94
KRH47029	Soybean	plastid	53.86	40.4
GSMUA_Achr6P27340_001	Banana	cytosol, endoplasmic reticulum, plastid	46.14	36.59
GSMUA_Achr3P15710_001	Banana	plastid	61.35	34.79
GSMUA_Achr2P09600_001	Banana	plastid	51.69	32.57
GSMUA_Achr2P14510_001	Banana	plastid	51.45	32.42
GSMUA_Achr1P13940_001	Banana	plastid	54.59	32.01
GSMUA_Achr4P24400_001	Banana	plastid	49.76	31.16
GSMUA_Achr10P...	Banana	plastid	49.03	28.31
CDY46900	Canola	plasma membrane	47.34	26.52
Bra021250.1-P	Field mustard	plasma membrane	54.11	24.62
GSMUA_Achr6P26510_001	Banana	cytosol	41.3	23.88
GSMUA_Achr6P18630_001	Banana	cytosol, nucleus, plasma membrane	30.43	23.46
GSMUA_Achr1P04890_001	Banana	cytosol	39.61	23.13
GSMUA_Achr9P05910_001	Banana	plasma membrane	40.82	22.93
Bra035231.1-P	Field mustard	plasma membrane	41.06	20.14
GSMUA_Achr8P04820_001	Banana	cytosol, plasma membrane, plastid	35.99	19.74
GSMUA_Achr8P13750_001	Banana	cytosol, nucleus, plastid	40.82	19.27
GSMUA_Achr5P07770_001	Banana	cytosol	33.57	18.48
Bra021253.1-P	Field mustard	plasma membrane	41.06	15.04
CDY48704	Canola	cytosol, mitochondrion, plasma membrane, plastid	10.63	11.34

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.22	Gene3D:3.30.200.20	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr5G06880_001	EnsemblPlants:GSMUA_Achr5P06880_001	EnsemblPlants:GSMUA_Achr5T06880_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
UniProt:M0SWB7	PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF89	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002960C57	SEG:seg	:	:

Description

retrotransposon protein, putative, unclassified, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr5G06880_001]

Coordinates

chr5:+:4999465..5003709

Molecular Weight (calculated)

45487.5 Da

IEP (calculated)

6.796

GRAVY (calculated)

-0.464

Length

414 amino acids

Sequence
(BLAST)

001: MISSSGGSGS NYSGSEVPLP PSPGGALRLS RSTFTYEQLV MATDGFSDAN LLGQGGFGYV HRGVLPNGKE VAVKQLKIGS GQGEREFQAE VDIISRVHHK
101: HLVTLVGYCI SGGKRLLVYE YVPNNTLEFH LHGRDRPTME WSTRLKIALG SAKGLAYLHE DCHPKIIHRD IKAANILLDY KFEPKVADFG LAKFASDNNT
201: HVSTRVMGTF GYLAPEYASS GKLTDKSDVF SFGVMLLELI TGRRPVDSSQ TFMDDSLVDW ARPLLTRALE DGNYDALVDP KLGRNFDPNE MACMIACAAA
301: CVRHSARRRP RMSQIMRALE GDVSLEDLNE GIRPGHSRFY SSHGSSDYDS SQYNEDMKKF RKMALTPEYG SSDYSAPTSE YGQHPSASAS SEGQHTQEIE
401: TEKKKDSSGF GSSL

Best Arabidopsis Sequence Match ( AT3G24550.1 )
(BLAST)

001: MSTAPSPGTT PSPSPPSPPT NSTTTTPPPA ASSPPPTTTP SSPPPSPSTN STSPPPSSPL PPSLPPPSPP GSLTPPLPQP SPSAPITPSP PSPTTPSNPR
101: SPPSPNQGPP NTPSGSTPRT PSNTKPSPPS DSSDGLSTGV VVGIAIGGVA ILVILTLICL LCKKKRRRRH DDEAAYYVPP PPPSGPKAGG PYGGQQQYWQ
201: QQNASRPSDN HVVTSLPPPK PPSPPRKPPP PPPPPAFMSS SGGSDYSDLP VLPPPSPGLV LGFSKSTFTY EELSRATNGF SEANLLGQGG FGYVHKGILP
301: SGKEVAVKQL KAGSGQGERE FQAEVEIISR VHHRHLVSLI GYCMAGVQRL LVYEFVPNNN LEFHLHGKGR PTMEWSTRLK IALGSAKGLS YLHEDCNPKI
401: IHRDIKASNI LIDFKFEAKV ADFGLAKIAS DTNTHVSTRV MGTFGYLAPE YAASGKLTEK SDVFSFGVVL LELITGRRPV DANNVYVDDS LVDWARPLLN
501: RASEEGDFEG LADSKMGNEY DREEMARMVA CAAACVRHSA RRRPRMSQIV RALEGNVSLS DLNEGMRPGH SNVYSSYGGS TDYDTSQYND DMIKFRKMAL
601: GTQEYGTTGE YSNPTSDYGL YPSGSSSEGQ ATREMEMGKI KKTGQGYSGP SL

Arabidopsis Description

PERK1Proline-rich receptor-like protein kinase PERK1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LV48]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.