Factsheet for AT3G24550.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra015053.1-P	Field mustard	plastid	87.42	88.51
CDY39543	Canola	plastid	87.88	88.29
CDX77417	Canola	plastid	87.42	87.69
GSMUA_Achr5P06880_001	Banana	plastid	47.24	74.4
GSMUA_Achr8P19800_001	Banana	cytosol	44.63	70.63
GSMUA_Achr10P...	Banana	plastid	51.23	68.16
AT3G24540.1	Thale cress	cytosol	48.93	66.6
GSMUA_Achr7P14360_001	Banana	plastid	53.68	64.58
HORVU1Hr1G030140.2	Barley	plastid	59.36	63.55
EES19240	Sorghum	cytosol, plasma membrane, plastid	56.29	63.06
TraesCS1D01G126300.1	Wheat	plastid	62.27	62.17
TraesCS1A01G127900.1	Wheat	plastid	62.42	61.85
TraesCS1B01G147000.2	Wheat	plastid	57.82	61.1
OQU86081	Sorghum	plastid	56.9	59.84
Os05t0218400-01	Rice	plasma membrane	61.66	59.56
Zm00001d010421_P002	Maize	plasma membrane	61.81	59.35
Os01t0227200-01	Rice	plasma membrane	53.83	58.79
Zm00001d039311_P001	Maize	mitochondrion	54.75	57.58
TraesCS3B01G179300.1	Wheat	plastid	55.52	57.37
HORVU3Hr1G030900.1	Barley	plastid	55.21	57.23
TraesCS3A01G152200.1	Wheat	plastid	55.06	56.98
AT1G52290.1	Thale cress	plastid	44.48	56.97
TraesCS3D01G160000.1	Wheat	plastid	55.06	56.8
GSMUA_Achr10P...	Banana	cytosol	51.38	55.83
Zm00001d037811_P001	Maize	plasma membrane	41.87	55.15
AT2G18470.3	Thale cress	plastid	51.53	53.08
AT1G70450.1	Thale cress	cytosol	31.14	51.52
AT1G49270.1	Thale cress	cytosol, plastid	51.69	48.21
AT4G34440.1	Thale cress	plastid	49.39	48.06
AT3G18810.1	Thale cress	nucleus, plastid	49.69	46.29
AT4G32710.1	Thale cress	plastid	46.32	41.31
AT1G70460.1	Thale cress	plastid	43.71	40.14
AT5G38560.1	Thale cress	plastid	41.1	39.35
AT1G23540.1	Thale cress	nucleus, plastid	43.1	39.03
AT1G10620.1	Thale cress	cytosol	41.41	37.6
AT1G68690.2	Thale cress	plastid	39.88	36.72
AT1G26150.1	Thale cress	plastid	41.26	35.3
AT1G55200.2	Thale cress	cytosol	26.99	26.04
AT5G56790.1	Thale cress	cytosol, plasma membrane, plastid	26.69	26.01
AT3G13690.1	Thale cress	cytosol	28.53	24.7

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.22	Gene3D:3.30.200.20	EntrezGene:822051	ProteinID:AEE76920.1	EMBL:AF370509
EMBL:AK319105	ArrayExpress:AT3G24550	EnsemblPlantsGene:AT3G24550	RefSeq:AT3G24550	TAIR:AT3G24550	RefSeq:AT3G24550-TAIR-G
EnsemblPlants:AT3G24550.1	TAIR:AT3G24550.1	Symbol:ATPERK1	EMBL:AY056788	EMBL:AY059901	EMBL:AY093065
EMBL:AY128792	EMBL:AY536855	EMBL:AY536856	Unigene:At.21723	ProteinID:BAB02007.1	EMBL:BT008400
EMBL:BT008409	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0006950	GO:GO:0007154	GO:GO:0007165
GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009605	GO:GO:0009607
GO:GO:0009611	GO:GO:0009620	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	GO:GO:0046777	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	RefSeq:NP_189098.1	PFAM:PF07714	PO:PO:0000005	PO:PO:0000013	PO:PO:0000037
PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185
PO:PO:0004507	PO:PO:0005052	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103
PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005
PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030
PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030
PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025195	PO:PO:0025281
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF89	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	UniProt:Q9LV48	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
TMHMM:TMhelix	UniParc:UPI0000048774	SEG:seg	:	:	:

Description

PERK1Proline-rich receptor-like protein kinase PERK1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LV48]

Coordinates

chr3:+:8960095..8963568

Molecular Weight (calculated)

69275.5 Da

IEP (calculated)

8.497

GRAVY (calculated)

-0.563

Length

652 amino acids

Sequence
(BLAST)

001: MSTAPSPGTT PSPSPPSPPT NSTTTTPPPA ASSPPPTTTP SSPPPSPSTN STSPPPSSPL PPSLPPPSPP GSLTPPLPQP SPSAPITPSP PSPTTPSNPR
101: SPPSPNQGPP NTPSGSTPRT PSNTKPSPPS DSSDGLSTGV VVGIAIGGVA ILVILTLICL LCKKKRRRRH DDEAAYYVPP PPPSGPKAGG PYGGQQQYWQ
201: QQNASRPSDN HVVTSLPPPK PPSPPRKPPP PPPPPAFMSS SGGSDYSDLP VLPPPSPGLV LGFSKSTFTY EELSRATNGF SEANLLGQGG FGYVHKGILP
301: SGKEVAVKQL KAGSGQGERE FQAEVEIISR VHHRHLVSLI GYCMAGVQRL LVYEFVPNNN LEFHLHGKGR PTMEWSTRLK IALGSAKGLS YLHEDCNPKI
401: IHRDIKASNI LIDFKFEAKV ADFGLAKIAS DTNTHVSTRV MGTFGYLAPE YAASGKLTEK SDVFSFGVVL LELITGRRPV DANNVYVDDS LVDWARPLLN
501: RASEEGDFEG LADSKMGNEY DREEMARMVA CAAACVRHSA RRRPRMSQIV RALEGNVSLS DLNEGMRPGH SNVYSSYGGS TDYDTSQYND DMIKFRKMAL
601: GTQEYGTTGE YSNPTSDYGL YPSGSSSEGQ ATREMEMGKI KKTGQGYSGP SL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.