CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 5
cytosol 1
plasma membrane 1
nucleus 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P06880_001	Banana	plastid	49.65	68.36
GSMUA_Achr8P19800_001	Banana	cytosol	46.14	63.84
GSMUA_Achr10P...	Banana	plastid	50.0	58.16
AT1G52290.1	Thale cress	plastid	48.77	54.62
CDY02546	Canola	plastid	48.77	54.19
CDY47531	Canola	plastid	48.77	53.77
Bra014321.1-P	Field mustard	plastid	48.6	53.58
VIT_09s0002g04210.t01	Wine grape	plastid	51.4	53.18
GSMUA_Achr7P14360_001	Banana	plastid	49.82	52.4
Bra038894.1-P	Field mustard	cytosol	15.09	51.81
EES19240	Sorghum	cytosol, plasma membrane, plastid	52.11	51.03
HORVU1Hr1G030140.2	Barley	plastid	53.86	50.41
OQU86081	Sorghum	plastid	54.74	50.32
Os01t0227200-01	Rice	plasma membrane	51.4	49.08
Zm00001d039311_P001	Maize	mitochondrion	52.81	48.55
Solyc03g120760.2.1	Tomato	plasma membrane, plastid	49.47	48.54
TraesCS1D01G126300.1	Wheat	plastid	55.26	48.24
KRH39292	Soybean	plastid	56.14	48.19
GSMUA_Achr10P...	Banana	cytosol	50.7	48.17
Zm00001d037811_P001	Maize	plasma membrane	41.75	48.08
TraesCS1A01G127900.1	Wheat	plastid	55.44	48.02
KRH48383	Soybean	mitochondrion	56.49	47.99
PGSC0003DMT400006515	Potato	plastid	49.47	47.96
HORVU3Hr1G030900.1	Barley	plastid	51.75	46.9
TraesCS1B01G147000.2	Wheat	plastid	50.7	46.84
TraesCS3B01G179300.1	Wheat	plastid	51.58	46.59
Os05t0218400-01	Rice	plasma membrane	55.09	46.52
TraesCS3A01G152200.1	Wheat	plastid	51.23	46.35
TraesCS3D01G160000.1	Wheat	plastid	51.23	46.2
KRH47029	Soybean	plastid	44.04	45.47
Zm00001d010421_P002	Maize	plasma membrane	54.04	45.36
Bra021251.1-P	Field mustard	cytosol	8.77	45.05
KRH08293	Soybean	nucleus	46.84	44.57
KRH69932	Soybean	plastid	47.19	44.24
KRH60853	Soybean	cytosol, plastid	49.47	43.72
CDY48706	Canola	cytosol	39.65	42.8
KRH28656	Soybean	nucleus, plastid	47.37	42.72
KRH76796	Soybean	nucleus, plastid	47.19	42.43
KRH07595	Soybean	plastid	39.47	42.29
KRH52669	Soybean	plastid	45.26	38.34
KRH62013	Soybean	plastid	36.84	38.04
KRG99346	Soybean	plastid	41.23	37.78
KRH56245	Soybean	cytosol	22.46	36.06
KRH69571	Soybean	nucleus, plastid	41.05	34.41
KRH74591	Soybean	nucleus, plastid	41.4	34.4
KRH45181	Soybean	plastid	43.68	34.39
KRH45666	Soybean	cytosol, nucleus, plastid	42.46	33.7
KRH01485	Soybean	plastid	44.21	33.33
KRH75567	Soybean	plastid	41.05	32.87
KRH71097	Soybean	plastid	41.75	32.16
CDY46900	Canola	plasma membrane	35.96	27.74
KRH41431	Soybean	cytosol, nucleus, plasma membrane	30.53	25.85
Bra021250.1-P	Field mustard	plasma membrane	41.23	25.82
KRH09998	Soybean	cytosol	30.53	24.86
KRH60141	Soybean	cytosol	30.35	24.71
KRH47146	Soybean	cytosol	32.11	24.4
KRH44172	Soybean	cytosol	31.93	24.27
KRH23335	Soybean	cytosol	29.12	24.2
KRH56244	Soybean	cytosol	25.26	23.65
KRH18072	Soybean	cytosol	24.39	23.13
KRH53345	Soybean	cytosol	23.68	22.06
Bra035231.1-P	Field mustard	plasma membrane	32.63	22.04
KRH20591	Soybean	cytosol	25.79	21.88
KRH62713	Soybean	cytosol	26.32	21.49
KRH05755	Soybean	cytosol	25.26	20.22
KRH64578	Soybean	cytosol	19.82	20.0
KRH15276	Soybean	cytosol	25.44	19.57
Bra021253.1-P	Field mustard	plasma membrane	32.63	16.46
CDY48704	Canola	cytosol, mitochondrion, plasma membrane, plastid	10.53	15.46

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100788350	MapMan:18.4.1.22	Gene3D:3.30.200.20	EMBL:ACUP02004133	EnsemblPlantsGene:GLYMA_07G004700
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004675
GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166	GO:GO:0007178
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	UniProt:I1KG63	InterPro:IPR000719
EnsemblPlants:KRH47030	ProteinID:KRH47030	ProteinID:KRH47030.1	InterPro:Kinase-like_dom_sf	PFAM:PF07714	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF89	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI0002338C2F
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:364573..369959

Molecular Weight (calculated)

61598.4 Da

IEP (calculated)

6.400

GRAVY (calculated)

-0.386

Length

570 amino acids

Sequence
(BLAST)

001: MSAPAEAPSF TASPPSETTP SPNSTALSPP PPSTINATVS PPPPEAASPP TSTVNSGLST GTVSGIVIGA VLGSVGMLII GGIFFCFYRN WKRKKNHSQP
101: PQPKADIAGG TLQNWQDSVP PTTDGKVGFS PKPPPGGLVN QQQSSAALLT LVVNSSNTSS SLGSEKAKSY ISPSPGTSLA LSQSTFTYDE LSMATDGFSR
201: SNLLGQGGFG YVHKGVLPNG KIVAVKQLKS ESRQGEREFH AEVDVISRVH HRHLVSLVGY CVSDSQKMLV YEYVENDTLE FHLHGKDRLP MDWSTRMKIA
301: IGSAKGLAYL HEDCNPKIIH RDIKASNILL DESFEAKVAD FGLAKFSSDT DTHVSTRVMG TFGYMAPEYA ASGKLTEKSD VFSFGVVLLE LITGRKPVDK
401: TQTFIDDSMV EWARPLLSQA LENGNLNGLV DPRLQTNYNL DEMIRMTTCA ATCVRYSARL RPRMSQVVRA LEGNISLEDL NDGIAPGHSR VFGSFESSSY
501: DSVQYREDLK NFKKLALESQ EQGISEYSGP SSEYGRHPSV STSSDQQNTQ EMEMGNKKGS NHDSGIQVLD

Best Arabidopsis Sequence Match ( AT3G24550.1 )
(BLAST)

001: MSTAPSPGTT PSPSPPSPPT NSTTTTPPPA ASSPPPTTTP SSPPPSPSTN STSPPPSSPL PPSLPPPSPP GSLTPPLPQP SPSAPITPSP PSPTTPSNPR
101: SPPSPNQGPP NTPSGSTPRT PSNTKPSPPS DSSDGLSTGV VVGIAIGGVA ILVILTLICL LCKKKRRRRH DDEAAYYVPP PPPSGPKAGG PYGGQQQYWQ
201: QQNASRPSDN HVVTSLPPPK PPSPPRKPPP PPPPPAFMSS SGGSDYSDLP VLPPPSPGLV LGFSKSTFTY EELSRATNGF SEANLLGQGG FGYVHKGILP
301: SGKEVAVKQL KAGSGQGERE FQAEVEIISR VHHRHLVSLI GYCMAGVQRL LVYEFVPNNN LEFHLHGKGR PTMEWSTRLK IALGSAKGLS YLHEDCNPKI
401: IHRDIKASNI LIDFKFEAKV ADFGLAKIAS DTNTHVSTRV MGTFGYLAPE YAASGKLTEK SDVFSFGVVL LELITGRRPV DANNVYVDDS LVDWARPLLN
501: RASEEGDFEG LADSKMGNEY DREEMARMVA CAAACVRHSA RRRPRMSQIV RALEGNVSLS DLNEGMRPGH SNVYSSYGGS TDYDTSQYND DMIKFRKMAL
601: GTQEYGTTGE YSNPTSDYGL YPSGSSSEGQ ATREMEMGKI KKTGQGYSGP SL

Arabidopsis Description

PERK1Proline-rich receptor-like protein kinase PERK1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LV48]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.