Factsheet for VIT_09s0002g04210.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 5
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P19800_001	Banana	cytosol	50.45	67.48
GSMUA_Achr5P06880_001	Banana	plastid	50.09	66.67
VIT_03s0063g02440.t01	Wine grape	plastid	48.82	63.59
VIT_04s0023g01570.t01	Wine grape	nucleus	48.28	58.85
GSMUA_Achr10P...	Banana	plastid	52.09	58.57
CDY47531	Canola	plastid	51.36	54.74
GSMUA_Achr7P14360_001	Banana	plastid	53.72	54.61
CDY02546	Canola	plastid	50.45	54.19
Bra014321.1-P	Field mustard	plastid	50.45	53.77
AT1G52290.1	Thale cress	plastid	49.55	53.63
VIT_14s0083g00330.t01	Wine grape	plasma membrane	42.29	53.44
EES19240	Sorghum	cytosol, plasma membrane, plastid	56.08	53.09
Solyc03g120760.2.1	Tomato	plasma membrane, plastid	55.72	52.84
VIT_11s0016g03880.t01	Wine grape	plastid	61.89	52.46
PGSC0003DMT400006515	Potato	plastid	55.72	52.21
Os01t0227200-01	Rice	plasma membrane	56.08	51.76
HORVU1Hr1G030140.2	Barley	plastid	56.99	51.56
KRH47030	Soybean	nucleus, plastid	53.18	51.4
Zm00001d039311_P001	Maize	mitochondrion	57.17	50.81
OQU86081	Sorghum	plastid	56.81	50.48
TraesCS3B01G179300.1	Wheat	plastid	56.99	49.76
TraesCS3A01G152200.1	Wheat	plastid	56.62	49.52
TraesCS3D01G160000.1	Wheat	plastid	56.62	49.37
TraesCS1D01G126300.1	Wheat	plastid	58.44	49.31
GSMUA_Achr10P...	Banana	cytosol	53.54	49.17
HORVU3Hr1G030900.1	Barley	plastid	56.08	49.13
TraesCS1A01G127900.1	Wheat	plastid	58.26	48.78
Os05t0218400-01	Rice	plasma membrane	58.8	48.0
Zm00001d037811_P001	Maize	plasma membrane	43.01	47.88
Zm00001d010421_P002	Maize	plasma membrane	58.8	47.72
TraesCS1B01G147000.2	Wheat	plastid	52.99	47.33
Bra038894.1-P	Field mustard	cytosol	14.16	46.99
VIT_01s0127g00890.t01	Wine grape	mitochondrion	20.87	43.4
KRH47029	Soybean	plastid	43.19	43.12
CDY48706	Canola	cytosol	40.29	42.05
Bra021251.1-P	Field mustard	cytosol	7.62	37.84
VIT_01s0127g00670.t01	Wine grape	plastid	44.1	36.16
VIT_13s0067g01620.t01	Wine grape	cytosol, plastid	25.05	35.2
VIT_01s0011g02460.t01	Wine grape	plastid	44.28	33.61
CDY46900	Canola	plasma membrane	37.93	28.28
Bra021250.1-P	Field mustard	plasma membrane	42.29	25.6
VIT_09s0002g02420.t01	Wine grape	cytosol	33.03	24.36
VIT_11s0016g02430.t01	Wine grape	plasma membrane	31.76	23.24
VIT_18s0001g11590.t01	Wine grape	cytosol	29.58	22.55
Bra035231.1-P	Field mustard	plasma membrane	33.21	21.68
VIT_18s0001g14990.t01	Wine grape	cytosol, nucleus, peroxisome	25.59	18.03
Bra021253.1-P	Field mustard	plasma membrane	33.21	16.19
CDY48704	Canola	cytosol, mitochondrion, plasma membrane, plastid	11.07	15.72

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100242918	wikigene:100242918	MapMan:18.4.1.22	Gene3D:3.30.200.20	EMBL:AM485913
ProteinID:CAN75405	ProteinID:CAN75405.1	ProteinID:CBI36117	ProteinID:CBI36117.3	UniProt:D7U0H1	EMBL:FN596494
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004675
GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166	GO:GO:0007178
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
EntrezGene:LOC100242918	wikigene:LOC100242918	PFAM:PF07714	PIRSF:PIRSF000615	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF89	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI0001984013	ArrayExpress:VIT_09s0002g04210
EnsemblPlantsGene:VIT_09s0002g04210	EnsemblPlants:VIT_09s0002g04210.t01	unigene:Vvi.23132	RefSeq:XP_002279197	RefSeq:XP_002279197.1	SEG:seg

Description

No Description!

Coordinates

chr9:+:3851492..3860308

Molecular Weight (calculated)

59563.1 Da

IEP (calculated)

7.387

GRAVY (calculated)

-0.313

Length

551 amino acids

Sequence
(BLAST)

001: MSSPAPASSA TTNRTSPPPP PPTTNGTIQA PVASPPPPGG PRPPSGLTTA TLITLIVGIV IGGLFVLIGV GVLVIFCRQK KRREQYGLTN VSGSKDDPSA
101: PLQHWQQNAH QPTNNTDPML PKHAPLLSIG SKPQLSPVHI PASPPPMGIL GTEKPLAPPS PGISLGFSKS AFTYEELAIA TDGFSNINLL GQGGFGYVHK
201: GVLPNGREVA IKHLKAGSGQ GEREFQAEVE IISRVHHKHL VSLVGYCTTG AQRMLVYEFV PNGTLQHHLH GTGRPTMNWA TRIKIALGSA KGLAYLHEDC
301: HPKIIHRDIK AANILLDHNF EAKVADFGLA KFASDTDTHV STRVMGTFGY LAPEYASSGK LTDKSDVFSF GVVLLELITG RRPIDKTENE SIVDWARPLL
401: TQALEESKYG ALVDPNLQKD YNYNEMARMV ACAAVCVRYL ARLRPRMSQV VRALEGNLPL DDLNEGIIPG HSSFHCRYGS SDDDTIHGSE DLKKFRKMAL
501: ESHEQGSIEC TVPISASDPH TSNSSFEGQQ TCKEVEMEKH KENIQNSGES S

Best Arabidopsis Sequence Match ( AT3G24550.1 )
(BLAST)

001: MSTAPSPGTT PSPSPPSPPT NSTTTTPPPA ASSPPPTTTP SSPPPSPSTN STSPPPSSPL PPSLPPPSPP GSLTPPLPQP SPSAPITPSP PSPTTPSNPR
101: SPPSPNQGPP NTPSGSTPRT PSNTKPSPPS DSSDGLSTGV VVGIAIGGVA ILVILTLICL LCKKKRRRRH DDEAAYYVPP PPPSGPKAGG PYGGQQQYWQ
201: QQNASRPSDN HVVTSLPPPK PPSPPRKPPP PPPPPAFMSS SGGSDYSDLP VLPPPSPGLV LGFSKSTFTY EELSRATNGF SEANLLGQGG FGYVHKGILP
301: SGKEVAVKQL KAGSGQGERE FQAEVEIISR VHHRHLVSLI GYCMAGVQRL LVYEFVPNNN LEFHLHGKGR PTMEWSTRLK IALGSAKGLS YLHEDCNPKI
401: IHRDIKASNI LIDFKFEAKV ADFGLAKIAS DTNTHVSTRV MGTFGYLAPE YAASGKLTEK SDVFSFGVVL LELITGRRPV DANNVYVDDS LVDWARPLLN
501: RASEEGDFEG LADSKMGNEY DREEMARMVA CAAACVRHSA RRRPRMSQIV RALEGNVSLS DLNEGMRPGH SNVYSSYGGS TDYDTSQYND DMIKFRKMAL
601: GTQEYGTTGE YSNPTSDYGL YPSGSSSEGQ ATREMEMGKI KKTGQGYSGP SL

Arabidopsis Description

PERK1Proline-rich receptor-like protein kinase PERK1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LV48]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.